EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000021819 (Gene tree)
Gene ID: -
Gene Symbol: srp72
Alias: wu:fi03d11
Full Name: signal recognition particle 72
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 10036 bases
Position: chrPEQF01099417.1:1437736-1447771
Accession: 111644673
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000028223	SRP72	PF08492.12	8.2e-21	1	1
ENSSLDP00000028192	SRP72	PF08492.12	8.5e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000029034	-	3993	XM_023393618	ENSSLDP00000028192	684 (aa)	XP_023249386	-
ENSSLDT00000029065	-	2001	-	ENSSLDP00000028223	666 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000021819's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000021819's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000021819	srp72	97	76.923	ENSG00000174780	SRP72	99	76.751	Homo_sapiens
ENSSLDG00000021819	srp72	92	93.233	ENSAPOG00000019438	srp72	99	93.233	Acanthochromis_polyacanthus
ENSSLDG00000021819	srp72	97	77.174	ENSAMEG00000008469	SRP72	100	77.117	Ailuropoda_melanoleuca
ENSSLDG00000021819	srp72	98	93.731	ENSACIG00000000488	srp72	100	93.731	Amphilophus_citrinellus
ENSSLDG00000021819	srp72	98	94.012	ENSAOCG00000011256	srp72	100	94.012	Amphiprion_ocellaris
ENSSLDG00000021819	srp72	98	95.359	ENSAPEG00000001512	srp72	100	93.862	Amphiprion_percula
ENSSLDG00000021819	srp72	92	94.272	ENSATEG00000006781	srp72	100	94.787	Anabas_testudineus
ENSSLDG00000021819	srp72	99	75.982	ENSAPLG00000008751	SRP72	98	76.133	Anas_platyrhynchos
ENSSLDG00000021819	srp72	97	75.889	ENSACAG00000002381	SRP72	99	76.190	Anolis_carolinensis
ENSSLDG00000021819	srp72	95	77.179	ENSANAG00000020836	-	93	77.955	Aotus_nancymaae
ENSSLDG00000021819	srp72	98	94.461	ENSACLG00000014617	srp72	100	94.461	Astatotilapia_calliptera
ENSSLDG00000021819	srp72	98	83.257	ENSAMXG00000004011	srp72	100	83.558	Astyanax_mexicanus
ENSSLDG00000021819	srp72	97	76.805	ENSBTAG00000010593	SRP72	99	76.304	Bos_taurus
ENSSLDG00000021819	srp72	97	76.308	ENSCJAG00000017998	SRP72	99	76.155	Callithrix_jacchus
ENSSLDG00000021819	srp72	97	77.077	ENSCAFG00000002244	SRP72	99	77.049	Canis_familiaris
ENSSLDG00000021819	srp72	97	77.077	ENSCAFG00020027338	SRP72	98	77.911	Canis_lupus_dingo
ENSSLDG00000021819	srp72	97	75.538	ENSCHIG00000021465	SRP72	99	74.925	Capra_hircus
ENSSLDG00000021819	srp72	97	77.160	ENSTSYG00000010571	-	99	76.786	Carlito_syrichta
ENSSLDG00000021819	srp72	81	60.595	ENSCAPG00000016668	SRP72	100	67.829	Cavia_aperea
ENSSLDG00000021819	srp72	97	76.923	ENSCPOG00000000218	SRP72	99	76.602	Cavia_porcellus
ENSSLDG00000021819	srp72	95	77.143	ENSCCAG00000030683	-	93	77.920	Cebus_capucinus
ENSSLDG00000021819	srp72	97	74.769	ENSCCAG00000030830	-	99	74.813	Cebus_capucinus
ENSSLDG00000021819	srp72	97	76.769	ENSCATG00000008072	SRP72	99	76.602	Cercocebus_atys
ENSSLDG00000021819	srp72	98	61.656	ENSCATG00000045359	-	95	61.350	Cercocebus_atys
ENSSLDG00000021819	srp72	97	76.615	ENSCLAG00000003571	SRP72	99	76.453	Chinchilla_lanigera
ENSSLDG00000021819	srp72	97	72.504	ENSCSAG00000005079	SRP72	99	72.470	Chlorocebus_sabaeus
ENSSLDG00000021819	srp72	89	75.893	ENSCHOG00000013240	SRP72	89	75.893	Choloepus_hoffmanni
ENSSLDG00000021819	srp72	96	76.983	ENSCPBG00000015015	SRP72	99	77.395	Chrysemys_picta_bellii
ENSSLDG00000021819	srp72	95	39.970	ENSCING00000002417	-	93	41.615	Ciona_intestinalis
ENSSLDG00000021819	srp72	92	41.444	ENSCSAVG00000011288	-	92	42.296	Ciona_savignyi
ENSSLDG00000021819	srp72	99	61.905	ENSCANG00000037920	-	98	53.201	Colobus_angolensis_palliatus
ENSSLDG00000021819	srp72	97	76.769	ENSCANG00000041709	SRP72	99	76.602	Colobus_angolensis_palliatus
ENSSLDG00000021819	srp72	99	77.211	ENSCGRG00001013548	Srp72	99	76.602	Cricetulus_griseus_chok1gshd
ENSSLDG00000021819	srp72	95	77.516	ENSCGRG00000003013	Srp72	99	77.165	Cricetulus_griseus_crigri
ENSSLDG00000021819	srp72	98	91.385	ENSCSEG00000003616	srp72	100	92.665	Cynoglossus_semilaevis
ENSSLDG00000021819	srp72	91	92.574	ENSCVAG00000001520	srp72	100	94.089	Cyprinodon_variegatus
ENSSLDG00000021819	srp72	85	82.632	ENSDARG00000014139	srp72	99	83.502	Danio_rerio
ENSSLDG00000021819	srp72	97	72.699	ENSDNOG00000039012	SRP72	83	72.821	Dasypus_novemcinctus
ENSSLDG00000021819	srp72	97	76.971	ENSDORG00000000171	Srp72	99	76.647	Dipodomys_ordii
ENSSLDG00000021819	srp72	96	40.123	FBgn0038810	Srp72	94	41.242	Drosophila_melanogaster
ENSSLDG00000021819	srp72	97	76.863	ENSETEG00000005191	SRP72	99	77.096	Echinops_telfairi
ENSSLDG00000021819	srp72	72	63.415	ENSEBUG00000003696	srp72	97	63.673	Eptatretus_burgeri
ENSSLDG00000021819	srp72	97	76.923	ENSEASG00005017747	SRP72	99	76.751	Equus_asinus_asinus
ENSSLDG00000021819	srp72	97	76.923	ENSECAG00000006920	SRP72	99	76.602	Equus_caballus
ENSSLDG00000021819	srp72	98	85.884	ENSELUG00000022415	srp72	100	85.141	Esox_lucius
ENSSLDG00000021819	srp72	97	76.852	ENSFCAG00000027600	SRP72	99	78.109	Felis_catus
ENSSLDG00000021819	srp72	96	77.484	ENSFALG00000006713	SRP72	100	77.596	Ficedula_albicollis
ENSSLDG00000021819	srp72	97	76.462	ENSFDAG00000002014	-	99	76.155	Fukomys_damarensis
ENSSLDG00000021819	srp72	97	50.078	ENSFDAG00000009793	-	94	48.765	Fukomys_damarensis
ENSSLDG00000021819	srp72	100	90.219	ENSFHEG00000017652	srp72	95	90.219	Fundulus_heteroclitus
ENSSLDG00000021819	srp72	98	80.734	ENSGMOG00000005986	srp72	100	81.306	Gadus_morhua
ENSSLDG00000021819	srp72	96	77.449	ENSGALG00000011403	SRP72	99	76.786	Gallus_gallus
ENSSLDG00000021819	srp72	98	92.676	ENSGAFG00000017762	srp72	100	91.629	Gambusia_affinis
ENSSLDG00000021819	srp72	98	93.601	ENSGACG00000016749	srp72	100	93.601	Gasterosteus_aculeatus
ENSSLDG00000021819	srp72	87	77.643	ENSGAGG00000024611	SRP72	98	78.752	Gopherus_agassizii
ENSSLDG00000021819	srp72	97	76.615	ENSGGOG00000013234	-	99	76.453	Gorilla_gorilla
ENSSLDG00000021819	srp72	98	94.461	ENSHBUG00000020723	srp72	100	94.461	Haplochromis_burtoni
ENSSLDG00000021819	srp72	97	76.615	ENSHGLG00000009791	SRP72	99	76.453	Heterocephalus_glaber_female
ENSSLDG00000021819	srp72	97	71.538	ENSHGLG00000005029	-	99	71.108	Heterocephalus_glaber_female
ENSSLDG00000021819	srp72	52	60.807	ENSHGLG00000003496	-	99	59.195	Heterocephalus_glaber_female
ENSSLDG00000021819	srp72	90	70.526	ENSHGLG00000010633	-	99	70.185	Heterocephalus_glaber_female
ENSSLDG00000021819	srp72	86	67.265	ENSHGLG00000003950	-	97	68.421	Heterocephalus_glaber_female
ENSSLDG00000021819	srp72	97	59.351	ENSHGLG00000018597	-	99	59.762	Heterocephalus_glaber_female
ENSSLDG00000021819	srp72	97	76.615	ENSHGLG00100009021	SRP72	99	76.453	Heterocephalus_glaber_male
ENSSLDG00000021819	srp72	97	57.692	ENSHGLG00100009346	-	99	57.871	Heterocephalus_glaber_male
ENSSLDG00000021819	srp72	97	71.538	ENSHGLG00100011236	-	99	71.108	Heterocephalus_glaber_male
ENSSLDG00000021819	srp72	86	66.816	ENSHGLG00100017133	-	97	67.982	Heterocephalus_glaber_male
ENSSLDG00000021819	srp72	98	90.000	ENSHCOG00000013760	srp72	100	90.120	Hippocampus_comes
ENSSLDG00000021819	srp72	98	84.454	ENSIPUG00000000210	srp72	100	83.707	Ictalurus_punctatus
ENSSLDG00000021819	srp72	97	77.419	ENSSTOG00000007305	SRP72	99	76.900	Ictidomys_tridecemlineatus
ENSSLDG00000021819	srp72	96	77.329	ENSJJAG00000018324	Srp72	99	78.589	Jaculus_jaculus
ENSSLDG00000021819	srp72	98	91.031	ENSKMAG00000003776	srp72	100	89.686	Kryptolebias_marmoratus
ENSSLDG00000021819	srp72	98	83.257	ENSLOCG00000002628	srp72	98	83.812	Lepisosteus_oculatus
ENSSLDG00000021819	srp72	97	76.615	ENSLAFG00000018307	SRP72	99	76.602	Loxodonta_africana
ENSSLDG00000021819	srp72	97	76.769	ENSMFAG00000031065	SRP72	99	76.602	Macaca_fascicularis
ENSSLDG00000021819	srp72	98	62.577	ENSMFAG00000037164	-	97	62.693	Macaca_fascicularis
ENSSLDG00000021819	srp72	98	76.723	ENSMMUG00000016368	SRP72	98	76.444	Macaca_mulatta
ENSSLDG00000021819	srp72	86	68.182	ENSMMUG00000021262	-	95	68.182	Macaca_mulatta
ENSSLDG00000021819	srp72	97	76.769	ENSMNEG00000038065	-	99	76.602	Macaca_nemestrina
ENSSLDG00000021819	srp72	95	76.070	ENSMLEG00000030140	-	93	76.358	Mandrillus_leucophaeus
ENSSLDG00000021819	srp72	99	94.993	ENSMAMG00000014989	srp72	90	94.993	Mastacembelus_armatus
ENSSLDG00000021819	srp72	98	94.461	ENSMZEG00005003325	srp72	100	94.461	Maylandia_zebra
ENSSLDG00000021819	srp72	93	72.903	ENSMGAG00000008567	SRP72	100	76.333	Meleagris_gallopavo
ENSSLDG00000021819	srp72	99	77.005	ENSMAUG00000001237	Srp72	99	76.347	Mesocricetus_auratus
ENSSLDG00000021819	srp72	95	77.021	ENSMICG00000008507	-	93	77.796	Microcebus_murinus
ENSSLDG00000021819	srp72	99	76.577	ENSMOCG00000020309	Srp72	99	76.304	Microtus_ochrogaster
ENSSLDG00000021819	srp72	98	92.665	ENSMMOG00000002627	srp72	100	92.665	Mola_mola
ENSSLDG00000021819	srp72	96	73.095	ENSMODG00000020697	SRP72	99	72.876	Monodelphis_domestica
ENSSLDG00000021819	srp72	98	93.862	ENSMALG00000003747	srp72	100	94.040	Monopterus_albus
ENSSLDG00000021819	srp72	99	76.762	MGP_CAROLIEiJ_G0027323	Srp72	99	76.155	Mus_caroli
ENSSLDG00000021819	srp72	99	76.762	ENSMUSG00000036323	Srp72	99	76.155	Mus_musculus
ENSSLDG00000021819	srp72	99	77.143	MGP_PahariEiJ_G0017103	Srp72	99	77.945	Mus_pahari
ENSSLDG00000021819	srp72	99	76.762	MGP_SPRETEiJ_G0028317	Srp72	99	76.155	Mus_spretus
ENSSLDG00000021819	srp72	97	77.174	ENSMPUG00000004828	SRP72	99	76.900	Mustela_putorius_furo
ENSSLDG00000021819	srp72	97	77.054	ENSMLUG00000007344	SRP72	99	76.682	Myotis_lucifugus
ENSSLDG00000021819	srp72	99	77.628	ENSNGAG00000012595	Srp72	100	79.597	Nannospalax_galili
ENSSLDG00000021819	srp72	98	90.719	ENSNBRG00000014492	srp72	100	90.269	Neolamprologus_brichardi
ENSSLDG00000021819	srp72	97	71.649	ENSNLEG00000008806	-	99	71.535	Nomascus_leucogenys
ENSSLDG00000021819	srp72	96	65.941	ENSMEUG00000005164	SRP72	89	73.727	Notamacropus_eugenii
ENSSLDG00000021819	srp72	96	76.242	ENSOPRG00000012521	SRP72	99	75.410	Ochotona_princeps
ENSSLDG00000021819	srp72	97	75.155	ENSODEG00000012214	SRP72	99	74.814	Octodon_degus
ENSSLDG00000021819	srp72	98	94.196	ENSONIG00000001446	srp72	100	94.196	Oreochromis_niloticus
ENSSLDG00000021819	srp72	97	60.731	ENSOANG00000008562	SRP72	99	60.947	Ornithorhynchus_anatinus
ENSSLDG00000021819	srp72	97	77.385	ENSOCUG00000012226	SRP72	99	76.751	Oryctolagus_cuniculus
ENSSLDG00000021819	srp72	98	87.575	ENSORLG00000020418	srp72	99	88.323	Oryzias_latipes
ENSSLDG00000021819	srp72	98	87.126	ENSORLG00020009138	srp72	98	87.068	Oryzias_latipes_hni
ENSSLDG00000021819	srp72	98	87.425	ENSORLG00015018251	srp72	99	88.174	Oryzias_latipes_hsok
ENSSLDG00000021819	srp72	98	86.963	ENSOMEG00000022008	srp72	98	88.316	Oryzias_melastigma
ENSSLDG00000021819	srp72	97	77.692	ENSOGAG00000003578	SRP72	99	77.794	Otolemur_garnettii
ENSSLDG00000021819	srp72	97	76.651	ENSOARG00000004329	SRP72	99	76.155	Ovis_aries
ENSSLDG00000021819	srp72	80	61.754	ENSPPAG00000032490	-	91	62.037	Pan_paniscus
ENSSLDG00000021819	srp72	97	76.923	ENSPPAG00000042265	SRP72	99	76.751	Pan_paniscus
ENSSLDG00000021819	srp72	98	55.488	ENSPPAG00000011428	-	95	55.471	Pan_paniscus
ENSSLDG00000021819	srp72	97	77.019	ENSPPRG00000015991	SRP72	99	78.109	Panthera_pardus
ENSSLDG00000021819	srp72	97	77.019	ENSPTIG00000018786	SRP72	99	78.109	Panthera_tigris_altaica
ENSSLDG00000021819	srp72	80	61.567	ENSPTRG00000043609	-	91	61.808	Pan_troglodytes
ENSSLDG00000021819	srp72	97	76.923	ENSPTRG00000048466	-	99	76.751	Pan_troglodytes
ENSSLDG00000021819	srp72	98	57.078	ENSPTRG00000048100	-	95	57.099	Pan_troglodytes
ENSSLDG00000021819	srp72	97	76.769	ENSPANG00000005495	SRP72	99	76.602	Papio_anubis
ENSSLDG00000021819	srp72	94	61.709	ENSPANG00000030230	-	98	61.551	Papio_anubis
ENSSLDG00000021819	srp72	94	76.997	ENSPSIG00000003003	SRP72	100	77.882	Pelodiscus_sinensis
ENSSLDG00000021819	srp72	99	77.005	ENSPEMG00000012828	-	98	78.086	Peromyscus_maniculatus_bairdii
ENSSLDG00000021819	srp72	97	76.507	ENSPCIG00000000732	SRP72	99	76.497	Phascolarctos_cinereus
ENSSLDG00000021819	srp72	98	92.526	ENSPFOG00000003480	srp72	100	91.480	Poecilia_formosa
ENSSLDG00000021819	srp72	98	92.526	ENSPLAG00000020122	srp72	100	91.480	Poecilia_latipinna
ENSSLDG00000021819	srp72	98	92.377	ENSPMEG00000019988	srp72	100	91.330	Poecilia_mexicana
ENSSLDG00000021819	srp72	98	92.377	ENSPREG00000006218	srp72	100	91.181	Poecilia_reticulata
ENSSLDG00000021819	srp72	57	65.013	ENSPPYG00000009152	-	97	64.010	Pongo_abelii
ENSSLDG00000021819	srp72	97	76.888	ENSPPYG00000014752	-	79	76.246	Pongo_abelii
ENSSLDG00000021819	srp72	97	75.385	ENSPVAG00000005590	SRP72	99	75.410	Pteropus_vampyrus
ENSSLDG00000021819	srp72	98	94.611	ENSPNYG00000001916	srp72	100	94.611	Pundamilia_nyererei
ENSSLDG00000021819	srp72	99	85.435	ENSPNAG00000022424	srp72	100	85.949	Pygocentrus_nattereri
ENSSLDG00000021819	srp72	99	75.262	ENSRNOG00000002100	LOC108348180	99	75.410	Rattus_norvegicus
ENSSLDG00000021819	srp72	99	60.000	ENSRBIG00000029328	-	98	60.309	Rhinopithecus_bieti
ENSSLDG00000021819	srp72	97	71.649	ENSRBIG00000042069	SRP72	99	71.642	Rhinopithecus_bieti
ENSSLDG00000021819	srp72	97	76.769	ENSRROG00000035704	SRP72	99	76.602	Rhinopithecus_roxellana
ENSSLDG00000021819	srp72	93	76.329	ENSSHAG00000000614	SRP72	99	73.810	Sarcophilus_harrisii
ENSSLDG00000021819	srp72	99	83.208	ENSSFOG00015002026	srp72	100	83.857	Scleropages_formosus
ENSSLDG00000021819	srp72	98	92.101	ENSSMAG00000007639	srp72	100	93.145	Scophthalmus_maximus
ENSSLDG00000021819	srp72	100	99.561	ENSSDUG00000007345	srp72	100	99.561	Seriola_dumerili
ENSSLDG00000021819	srp72	74	76.378	ENSSARG00000005804	SRP72	76	75.819	Sorex_araneus
ENSSLDG00000021819	srp72	96	77.138	ENSSPUG00000009740	SRP72	98	77.390	Sphenodon_punctatus
ENSSLDG00000021819	srp72	98	96.407	ENSSPAG00000011565	srp72	100	96.407	Stegastes_partitus
ENSSLDG00000021819	srp72	99	74.247	ENSSSCG00000008900	SRP72	99	74.102	Sus_scrofa
ENSSLDG00000021819	srp72	96	77.364	ENSTGUG00000004767	SRP72	99	77.463	Taeniopygia_guttata
ENSSLDG00000021819	srp72	98	88.615	ENSTRUG00000009831	srp72	100	89.521	Takifugu_rubripes
ENSSLDG00000021819	srp72	98	91.369	ENSTNIG00000013073	srp72	100	91.369	Tetraodon_nigroviridis
ENSSLDG00000021819	srp72	86	65.812	ENSTBEG00000007394	SRP72	90	65.812	Tupaia_belangeri
ENSSLDG00000021819	srp72	93	76.090	ENSTTRG00000010945	SRP72	100	76.378	Tursiops_truncatus
ENSSLDG00000021819	srp72	58	79.221	ENSUAMG00000001701	SRP72	100	77.690	Ursus_americanus
ENSSLDG00000021819	srp72	97	77.019	ENSUMAG00000008151	SRP72	99	76.751	Ursus_maritimus
ENSSLDG00000021819	srp72	97	75.385	ENSVPAG00000000458	SRP72	99	75.410	Vicugna_pacos
ENSSLDG00000021819	srp72	97	76.923	ENSVVUG00000006020	SRP72	99	76.900	Vulpes_vulpes
ENSSLDG00000021819	srp72	95	74.097	ENSXETG00000010205	srp72	100	74.411	Xenopus_tropicalis
ENSSLDG00000021819	srp72	99	91.502	ENSXMAG00000018000	srp72	99	91.018	Xiphophorus_maculatus