EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000021845 (Gene tree)
Gene ID: -
Gene Symbol: PABPN1L
Alias: ePABP2
Full Name: poly(A) binding protein nuclear 1 like%2C cytoplasmic
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 5488 bases
Position: chrPEQF01099214.1:903726-909213
Accession: 111668278
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000028209	RRM_1	PF00076.22	1.5e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000029051	PABPN1L-201	3405	XM_023424294	ENSSLDP00000028209	263 (aa)	XP_023280062	UPI000C6F61BB

Gene Model

Click here to download ENSSLDG00000021845's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000021845's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000021845	PABPN1L	65	58.011	ENSSLDG00000007118	pabpn1	63	61.438

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000021845	PABPN1L	71	51.741	ENSG00000205022	PABPN1L	58	54.601	Homo_sapiens
ENSSLDG00000021845	PABPN1L	91	95.000	ENSAPOG00000000685	PABPN1L	78	92.917	Acanthochromis_polyacanthus
ENSSLDG00000021845	PABPN1L	91	89.121	ENSACIG00000021400	PABPN1L	98	87.029	Amphilophus_citrinellus
ENSSLDG00000021845	PABPN1L	100	96.578	ENSAOCG00000019844	PABPN1L	100	96.578	Amphiprion_ocellaris
ENSSLDG00000021845	PABPN1L	100	96.198	ENSAPEG00000019534	PABPN1L	100	96.198	Amphiprion_percula
ENSSLDG00000021845	PABPN1L	91	94.561	ENSATEG00000011646	PABPN1L	95	95.397	Anabas_testudineus
ENSSLDG00000021845	PABPN1L	66	56.000	ENSACAG00000013250	PABPN1L	74	58.621	Anolis_carolinensis
ENSSLDG00000021845	PABPN1L	76	51.724	ENSANAG00000038178	PABPN1L	61	53.846	Aotus_nancymaae
ENSSLDG00000021845	PABPN1L	100	91.635	ENSACLG00000025147	PABPN1L	100	92.776	Astatotilapia_calliptera
ENSSLDG00000021845	PABPN1L	55	70.345	ENSAMXG00000010873	PABPN1L	55	70.345	Astyanax_mexicanus
ENSSLDG00000021845	PABPN1L	71	53.266	ENSCJAG00000045284	PABPN1L	60	52.147	Callithrix_jacchus
ENSSLDG00000021845	PABPN1L	76	53.140	ENSCCAG00000027631	PABPN1L	58	54.545	Cebus_capucinus
ENSSLDG00000021845	PABPN1L	71	52.451	ENSCATG00000031060	PABPN1L	59	53.988	Cercocebus_atys
ENSSLDG00000021845	PABPN1L	58	49.689	ENSCLAG00000000704	PABPN1L	63	46.286	Chinchilla_lanigera
ENSSLDG00000021845	PABPN1L	72	47.549	ENSCGRG00001013211	Pabpn1l	64	47.159	Cricetulus_griseus_chok1gshd
ENSSLDG00000021845	PABPN1L	72	47.549	ENSCGRG00000015868	Pabpn1l	64	47.159	Cricetulus_griseus_crigri
ENSSLDG00000021845	PABPN1L	100	86.364	ENSCSEG00000001142	pabpn1l	100	86.364	Cynoglossus_semilaevis
ENSSLDG00000021845	PABPN1L	100	91.255	ENSCVAG00000015547	PABPN1L	100	91.255	Cyprinodon_variegatus
ENSSLDG00000021845	PABPN1L	69	51.099	ENSDNOG00000034677	PABPN1L	57	53.289	Dasypus_novemcinctus
ENSSLDG00000021845	PABPN1L	73	48.500	ENSEASG00005000777	PABPN1L	61	50.595	Equus_asinus_asinus
ENSSLDG00000021845	PABPN1L	96	66.929	ENSELUG00000018385	PABPN1L	99	61.832	Esox_lucius
ENSSLDG00000021845	PABPN1L	63	52.632	ENSFCAG00000010465	PABPN1L	59	51.515	Felis_catus
ENSSLDG00000021845	PABPN1L	62	59.146	ENSFALG00000003319	PABPN1L	61	54.487	Ficedula_albicollis
ENSSLDG00000021845	PABPN1L	58	54.088	ENSFDAG00000021067	PABPN1L	60	49.693	Fukomys_damarensis
ENSSLDG00000021845	PABPN1L	100	88.973	ENSFHEG00000018295	PABPN1L	100	89.354	Fundulus_heteroclitus
ENSSLDG00000021845	PABPN1L	100	75.281	ENSGMOG00000001475	PABPN1L	100	73.783	Gadus_morhua
ENSSLDG00000021845	PABPN1L	55	60.135	ENSGALG00000006242	PABPN1L	63	63.063	Gallus_gallus
ENSSLDG00000021845	PABPN1L	100	90.875	ENSGAFG00000012565	PABPN1L	100	90.875	Gambusia_affinis
ENSSLDG00000021845	PABPN1L	100	86.517	ENSGACG00000015428	PABPN1L	100	86.517	Gasterosteus_aculeatus
ENSSLDG00000021845	PABPN1L	71	51.942	ENSGGOG00000012670	PABPN1L	59	54.491	Gorilla_gorilla
ENSSLDG00000021845	PABPN1L	100	92.395	ENSHBUG00000002388	PABPN1L	100	93.156	Haplochromis_burtoni
ENSSLDG00000021845	PABPN1L	100	86.194	ENSHCOG00000004151	PABPN1L	99	86.567	Hippocampus_comes
ENSSLDG00000021845	PABPN1L	67	64.088	ENSIPUG00000023583	PABPN1L	73	68.874	Ictalurus_punctatus
ENSSLDG00000021845	PABPN1L	73	47.917	ENSJJAG00000006433	Pabpn1l	63	48.256	Jaculus_jaculus
ENSSLDG00000021845	PABPN1L	82	91.163	ENSKMAG00000001112	PABPN1L	94	92.019	Kryptolebias_marmoratus
ENSSLDG00000021845	PABPN1L	100	89.057	ENSLBEG00000011647	PABPN1L	97	91.321	Labrus_bergylta
ENSSLDG00000021845	PABPN1L	71	51.942	ENSMFAG00000002924	PABPN1L	59	54.491	Macaca_fascicularis
ENSSLDG00000021845	PABPN1L	71	53.140	ENSMMUG00000012438	PABPN1L	59	54.217	Macaca_mulatta
ENSSLDG00000021845	PABPN1L	71	51.942	ENSMNEG00000044808	PABPN1L	59	54.491	Macaca_nemestrina
ENSSLDG00000021845	PABPN1L	71	52.404	ENSMLEG00000032667	PABPN1L	59	54.491	Mandrillus_leucophaeus
ENSSLDG00000021845	PABPN1L	100	91.635	ENSMZEG00005002186	PABPN1L	100	92.776	Maylandia_zebra
ENSSLDG00000021845	PABPN1L	75	47.525	ENSMICG00000028179	PABPN1L	59	50.307	Microcebus_murinus
ENSSLDG00000021845	PABPN1L	75	94.949	ENSMMOG00000017714	PABPN1L	86	94.949	Mola_mola
ENSSLDG00000021845	PABPN1L	100	90.114	ENSMALG00000016926	PABPN1L	100	90.875	Monopterus_albus
ENSSLDG00000021845	PABPN1L	68	45.146	MGP_CAROLIEiJ_G0031670	Pabpn1l	59	47.531	Mus_caroli
ENSSLDG00000021845	PABPN1L	76	46.445	ENSMUSG00000069867	Pabpn1l	59	48.148	Mus_musculus
ENSSLDG00000021845	PABPN1L	76	43.868	ENSNGAG00000023992	Pabpn1l	64	46.286	Nannospalax_galili
ENSSLDG00000021845	PABPN1L	90	92.017	ENSNBRG00000017078	PABPN1L	100	93.277	Neolamprologus_brichardi
ENSSLDG00000021845	PABPN1L	71	49.505	ENSOPRG00000005597	PABPN1L	61	50.595	Ochotona_princeps
ENSSLDG00000021845	PABPN1L	100	83.270	ENSORLG00000026560	PABPN1L	100	83.270	Oryzias_latipes
ENSSLDG00000021845	PABPN1L	100	82.890	ENSORLG00020015068	PABPN1L	100	82.890	Oryzias_latipes_hni
ENSSLDG00000021845	PABPN1L	100	83.270	ENSORLG00015000397	PABPN1L	100	83.270	Oryzias_latipes_hsok
ENSSLDG00000021845	PABPN1L	100	80.989	ENSOMEG00000017896	PABPN1L	72	80.989	Oryzias_melastigma
ENSSLDG00000021845	PABPN1L	71	51.000	ENSPPAG00000028866	PABPN1L	58	54.321	Pan_paniscus
ENSSLDG00000021845	PABPN1L	63	52.632	ENSPPRG00000015106	PABPN1L	59	51.515	Panthera_pardus
ENSSLDG00000021845	PABPN1L	63	52.121	ENSPTIG00000015606	PABPN1L	61	50.314	Panthera_tigris_altaica
ENSSLDG00000021845	PABPN1L	71	51.000	ENSPTRG00000031120	PABPN1L	58	54.321	Pan_troglodytes
ENSSLDG00000021845	PABPN1L	71	51.923	ENSPANG00000026039	PABPN1L	59	54.217	Papio_anubis
ENSSLDG00000021845	PABPN1L	61	62.733	ENSPSIG00000003404	PABPN1L	76	57.419	Pelodiscus_sinensis
ENSSLDG00000021845	PABPN1L	81	86.854	ENSPMGG00000013927	PABPN1L	94	86.854	Periophthalmus_magnuspinnatus
ENSSLDG00000021845	PABPN1L	72	46.890	ENSPEMG00000016624	Pabpn1l	60	49.383	Peromyscus_maniculatus_bairdii
ENSSLDG00000021845	PABPN1L	50	62.687	ENSPCIG00000007038	-	67	69.072	Phascolarctos_cinereus
ENSSLDG00000021845	PABPN1L	100	91.255	ENSPFOG00000007001	PABPN1L	100	91.255	Poecilia_formosa
ENSSLDG00000021845	PABPN1L	100	91.255	ENSPLAG00000018431	PABPN1L	100	91.255	Poecilia_latipinna
ENSSLDG00000021845	PABPN1L	100	91.255	ENSPMEG00000009108	PABPN1L	100	91.255	Poecilia_mexicana
ENSSLDG00000021845	PABPN1L	68	85.326	ENSPMEG00000000169	-	91	85.326	Poecilia_mexicana
ENSSLDG00000021845	PABPN1L	88	92.208	ENSPREG00000022533	PABPN1L	92	92.488	Poecilia_reticulata
ENSSLDG00000021845	PABPN1L	73	53.234	ENSPPYG00000007655	PABPN1L	58	53.892	Pongo_abelii
ENSSLDG00000021845	PABPN1L	71	49.505	ENSPVAG00000002716	PABPN1L	58	53.333	Pteropus_vampyrus
ENSSLDG00000021845	PABPN1L	100	91.635	ENSPNYG00000004803	PABPN1L	100	92.776	Pundamilia_nyererei
ENSSLDG00000021845	PABPN1L	71	50.718	ENSRBIG00000030740	PABPN1L	59	52.695	Rhinopithecus_bieti
ENSSLDG00000021845	PABPN1L	71	52.885	ENSRROG00000035483	-	59	53.892	Rhinopithecus_roxellana
ENSSLDG00000021845	PABPN1L	71	50.718	ENSRROG00000032240	-	59	52.695	Rhinopithecus_roxellana
ENSSLDG00000021845	PABPN1L	71	51.244	ENSSBOG00000018410	PABPN1L	58	53.333	Saimiri_boliviensis_boliviensis
ENSSLDG00000021845	PABPN1L	100	89.219	ENSSMAG00000021348	PABPN1L	100	89.219	Scophthalmus_maximus
ENSSLDG00000021845	PABPN1L	100	99.620	ENSSDUG00000006986	PABPN1L	100	99.620	Seriola_dumerili
ENSSLDG00000021845	PABPN1L	57	62.667	ENSSPUG00000007031	PABPN1L	63	59.310	Sphenodon_punctatus
ENSSLDG00000021845	PABPN1L	100	96.578	ENSSPAG00000017978	PABPN1L	100	96.578	Stegastes_partitus
ENSSLDG00000021845	PABPN1L	78	42.254	ENSSSCG00000036367	PABPN1L	63	48.000	Sus_scrofa
ENSSLDG00000021845	PABPN1L	100	81.369	ENSTRUG00000024725	PABPN1L	100	81.369	Takifugu_rubripes
ENSSLDG00000021845	PABPN1L	73	94.792	ENSTNIG00000009416	PABPN1L	100	94.792	Tetraodon_nigroviridis
ENSSLDG00000021845	PABPN1L	60	53.846	ENSXETG00000011258	pabpn1l	77	50.299	Xenopus_tropicalis
ENSSLDG00000021845	PABPN1L	79	92.754	ENSXCOG00000003254	PABPN1L	92	92.019	Xiphophorus_couchianus
ENSSLDG00000021845	PABPN1L	81	87.793	ENSXMAG00000029090	PABPN1L	94	87.793	Xiphophorus_maculatus