EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000021899 (Gene tree)
Gene ID: -
Gene Symbol: rabl3
Alias: fb40b02|wu:fb40b02|zgc:100876
Full Name: RAB%2C member of RAS oncogene family like 3
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 4902 bases
Position: chrPEQF01099237.1:438803-443704
Accession: 111668762
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000028325	MMR_HSR1	PF01926.23	5.4e-06	1	1
ENSSLDP00000028306	MMR_HSR1	PF01926.23	6.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000029149	-	1559	XM_023424887	ENSSLDP00000028306	233 (aa)	XP_023280655	UPI0008735A52
ENSSLDT00000029168	-	618	-	ENSSLDP00000028325	205 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000021899's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000021899's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000021899	rabl3	59	31.405	ENSSLDG00000006360	RAB39B	53	31.405

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000021899	rabl3	100	86.441	ENSG00000144840	RABL3	100	93.798	Homo_sapiens
ENSSLDG00000021899	rabl3	100	98.718	ENSAPOG00000024479	rabl3	100	98.718	Acanthochromis_polyacanthus
ENSSLDG00000021899	rabl3	100	87.288	ENSAMEG00000004809	RABL3	100	87.288	Ailuropoda_melanoleuca
ENSSLDG00000021899	rabl3	100	93.991	ENSACIG00000014343	rabl3	100	93.991	Amphilophus_citrinellus
ENSSLDG00000021899	rabl3	100	98.718	ENSAOCG00000011851	rabl3	100	98.718	Amphiprion_ocellaris
ENSSLDG00000021899	rabl3	100	98.718	ENSAPEG00000011214	rabl3	100	98.718	Amphiprion_percula
ENSSLDG00000021899	rabl3	100	99.142	ENSATEG00000003503	rabl3	100	99.142	Anabas_testudineus
ENSSLDG00000021899	rabl3	100	81.356	ENSACAG00000011313	-	100	81.356	Anolis_carolinensis
ENSSLDG00000021899	rabl3	100	88.559	ENSANAG00000027278	RABL3	100	88.559	Aotus_nancymaae
ENSSLDG00000021899	rabl3	100	98.283	ENSACLG00000009820	rabl3	100	98.283	Astatotilapia_calliptera
ENSSLDG00000021899	rabl3	100	94.850	ENSAMXG00000038716	rabl3	100	94.850	Astyanax_mexicanus
ENSSLDG00000021899	rabl3	100	88.983	ENSBTAG00000015898	RABL3	100	88.983	Bos_taurus
ENSSLDG00000021899	rabl3	100	88.559	ENSCJAG00000008611	RABL3	100	88.559	Callithrix_jacchus
ENSSLDG00000021899	rabl3	100	88.136	ENSCAFG00000011292	RABL3	89	88.136	Canis_familiaris
ENSSLDG00000021899	rabl3	100	88.136	ENSCAFG00020006397	RABL3	100	88.136	Canis_lupus_dingo
ENSSLDG00000021899	rabl3	100	88.983	ENSCHIG00000017365	RABL3	100	88.983	Capra_hircus
ENSSLDG00000021899	rabl3	100	86.864	ENSCPOG00000009645	RABL3	100	86.864	Cavia_porcellus
ENSSLDG00000021899	rabl3	100	86.864	ENSCATG00000032561	RABL3	100	86.864	Cercocebus_atys
ENSSLDG00000021899	rabl3	100	86.441	ENSCLAG00000010855	RABL3	100	86.441	Chinchilla_lanigera
ENSSLDG00000021899	rabl3	99	86.695	ENSCSAG00000007155	RABL3	100	86.695	Chlorocebus_sabaeus
ENSSLDG00000021899	rabl3	100	87.712	ENSCPBG00000001999	RABL3	100	87.712	Chrysemys_picta_bellii
ENSSLDG00000021899	rabl3	100	86.864	ENSCANG00000031684	RABL3	100	86.864	Colobus_angolensis_palliatus
ENSSLDG00000021899	rabl3	100	84.322	ENSCGRG00001021537	Rabl3	100	84.322	Cricetulus_griseus_chok1gshd
ENSSLDG00000021899	rabl3	100	84.322	ENSCGRG00000002114	Rabl3	100	84.322	Cricetulus_griseus_crigri
ENSSLDG00000021899	rabl3	100	90.952	ENSCSEG00000014982	rabl3	100	90.952	Cynoglossus_semilaevis
ENSSLDG00000021899	rabl3	100	91.220	ENSCVAG00000009904	rabl3	100	91.220	Cyprinodon_variegatus
ENSSLDG00000021899	rabl3	100	94.421	ENSDARG00000040959	rabl3	100	94.421	Danio_rerio
ENSSLDG00000021899	rabl3	100	86.017	ENSDNOG00000008174	RABL3	100	86.017	Dasypus_novemcinctus
ENSSLDG00000021899	rabl3	100	86.441	ENSETEG00000010206	RABL3	100	86.441	Echinops_telfairi
ENSSLDG00000021899	rabl3	100	88.559	ENSECAG00000023059	RABL3	100	88.559	Equus_caballus
ENSSLDG00000021899	rabl3	100	82.627	ENSEEUG00000002897	RABL3	100	82.627	Erinaceus_europaeus
ENSSLDG00000021899	rabl3	100	94.850	ENSELUG00000014758	rabl3	100	94.850	Esox_lucius
ENSSLDG00000021899	rabl3	100	88.136	ENSFCAG00000031879	RABL3	100	84.434	Felis_catus
ENSSLDG00000021899	rabl3	100	85.593	ENSFALG00000005296	RABL3	100	85.593	Ficedula_albicollis
ENSSLDG00000021899	rabl3	100	87.234	ENSFDAG00000000307	RABL3	100	87.234	Fukomys_damarensis
ENSSLDG00000021899	rabl3	100	93.991	ENSFHEG00000011273	rabl3	100	93.991	Fundulus_heteroclitus
ENSSLDG00000021899	rabl3	100	94.850	ENSGMOG00000007845	rabl3	100	94.850	Gadus_morhua
ENSSLDG00000021899	rabl3	100	86.864	ENSGALG00000014949	RABL3	100	86.864	Gallus_gallus
ENSSLDG00000021899	rabl3	100	93.562	ENSGAFG00000015953	rabl3	100	93.562	Gambusia_affinis
ENSSLDG00000021899	rabl3	100	94.850	ENSGACG00000007387	rabl3	100	96.124	Gasterosteus_aculeatus
ENSSLDG00000021899	rabl3	100	88.136	ENSGAGG00000003677	RABL3	100	88.136	Gopherus_agassizii
ENSSLDG00000021899	rabl3	100	86.441	ENSGGOG00000006059	RABL3	100	86.441	Gorilla_gorilla
ENSSLDG00000021899	rabl3	100	98.712	ENSHBUG00000019478	rabl3	93	98.712	Haplochromis_burtoni
ENSSLDG00000021899	rabl3	100	87.234	ENSHGLG00000014491	RABL3	100	87.234	Heterocephalus_glaber_female
ENSSLDG00000021899	rabl3	100	87.234	ENSHGLG00100004866	RABL3	100	87.234	Heterocephalus_glaber_male
ENSSLDG00000021899	rabl3	100	94.634	ENSHCOG00000019245	rabl3	100	94.634	Hippocampus_comes
ENSSLDG00000021899	rabl3	100	93.562	ENSIPUG00000012657	rabl3	100	93.562	Ictalurus_punctatus
ENSSLDG00000021899	rabl3	100	86.441	ENSSTOG00000019452	RABL3	100	86.441	Ictidomys_tridecemlineatus
ENSSLDG00000021899	rabl3	100	83.019	ENSJJAG00000023553	Rabl3	100	83.019	Jaculus_jaculus
ENSSLDG00000021899	rabl3	100	91.416	ENSKMAG00000015464	rabl3	100	91.416	Kryptolebias_marmoratus
ENSSLDG00000021899	rabl3	100	98.291	ENSLBEG00000010627	-	100	98.291	Labrus_bergylta
ENSSLDG00000021899	rabl3	100	98.291	ENSLBEG00000020595	rabl3	100	98.291	Labrus_bergylta
ENSSLDG00000021899	rabl3	100	89.831	ENSLOCG00000006265	rabl3	100	89.831	Lepisosteus_oculatus
ENSSLDG00000021899	rabl3	100	87.712	ENSLAFG00000003711	RABL3	100	87.712	Loxodonta_africana
ENSSLDG00000021899	rabl3	100	86.864	ENSMFAG00000031923	RABL3	100	86.864	Macaca_fascicularis
ENSSLDG00000021899	rabl3	100	83.019	ENSMMUG00000001594	RABL3	100	83.019	Macaca_mulatta
ENSSLDG00000021899	rabl3	100	86.864	ENSMNEG00000043980	RABL3	100	86.864	Macaca_nemestrina
ENSSLDG00000021899	rabl3	100	86.864	ENSMLEG00000028177	RABL3	100	86.864	Mandrillus_leucophaeus
ENSSLDG00000021899	rabl3	100	98.283	ENSMAMG00000015155	rabl3	100	98.283	Mastacembelus_armatus
ENSSLDG00000021899	rabl3	100	98.283	ENSMZEG00005002607	rabl3	100	98.283	Maylandia_zebra
ENSSLDG00000021899	rabl3	100	84.322	ENSMAUG00000013022	Rabl3	100	84.322	Mesocricetus_auratus
ENSSLDG00000021899	rabl3	100	87.712	ENSMICG00000049288	RABL3	100	87.712	Microcebus_murinus
ENSSLDG00000021899	rabl3	100	83.898	ENSMOCG00000015237	Rabl3	100	83.898	Microtus_ochrogaster
ENSSLDG00000021899	rabl3	100	93.617	ENSMMOG00000005628	rabl3	100	93.617	Mola_mola
ENSSLDG00000021899	rabl3	100	87.288	ENSMODG00000018232	RABL3	100	87.288	Monodelphis_domestica
ENSSLDG00000021899	rabl3	100	91.102	ENSMALG00000018837	rabl3	100	91.102	Monopterus_albus
ENSSLDG00000021899	rabl3	100	84.322	MGP_CAROLIEiJ_G0020728	Rabl3	100	93.023	Mus_caroli
ENSSLDG00000021899	rabl3	100	84.322	ENSMUSG00000022827	Rabl3	100	93.023	Mus_musculus
ENSSLDG00000021899	rabl3	100	83.898	MGP_PahariEiJ_G0016429	Rabl3	100	93.023	Mus_pahari
ENSSLDG00000021899	rabl3	100	84.322	MGP_SPRETEiJ_G0021628	Rabl3	100	93.023	Mus_spretus
ENSSLDG00000021899	rabl3	100	88.136	ENSMPUG00000008257	RABL3	89	88.136	Mustela_putorius_furo
ENSSLDG00000021899	rabl3	100	87.288	ENSMLUG00000014113	RABL3	100	87.288	Myotis_lucifugus
ENSSLDG00000021899	rabl3	99	83.010	ENSNGAG00000001939	Rabl3	99	83.010	Nannospalax_galili
ENSSLDG00000021899	rabl3	93	98.157	ENSNBRG00000012423	rabl3	92	98.157	Neolamprologus_brichardi
ENSSLDG00000021899	rabl3	100	86.441	ENSNLEG00000031723	RABL3	100	86.441	Nomascus_leucogenys
ENSSLDG00000021899	rabl3	100	85.593	ENSMEUG00000006606	RABL3	100	85.593	Notamacropus_eugenii
ENSSLDG00000021899	rabl3	100	86.441	ENSODEG00000004758	-	100	86.441	Octodon_degus
ENSSLDG00000021899	rabl3	100	99.142	ENSONIG00000004281	rabl3	100	99.142	Oreochromis_niloticus
ENSSLDG00000021899	rabl3	99	85.897	ENSOANG00000003928	RABL3	99	85.897	Ornithorhynchus_anatinus
ENSSLDG00000021899	rabl3	100	95.279	ENSORLG00000020457	rabl3	100	95.279	Oryzias_latipes
ENSSLDG00000021899	rabl3	100	95.279	ENSORLG00020008991	rabl3	100	90.558	Oryzias_latipes_hni
ENSSLDG00000021899	rabl3	100	95.279	ENSORLG00015005649	rabl3	88	95.279	Oryzias_latipes_hsok
ENSSLDG00000021899	rabl3	100	96.567	ENSOMEG00000015066	rabl3	100	96.567	Oryzias_melastigma
ENSSLDG00000021899	rabl3	100	86.864	ENSOGAG00000005961	RABL3	100	86.864	Otolemur_garnettii
ENSSLDG00000021899	rabl3	100	88.983	ENSOARG00000019939	RABL3	100	88.983	Ovis_aries
ENSSLDG00000021899	rabl3	94	85.135	ENSPPAG00000036997	RABL3	87	85.135	Pan_paniscus
ENSSLDG00000021899	rabl3	100	88.136	ENSPPRG00000016325	RABL3	100	88.136	Panthera_pardus
ENSSLDG00000021899	rabl3	100	88.136	ENSPTIG00000018021	RABL3	100	88.136	Panthera_tigris_altaica
ENSSLDG00000021899	rabl3	100	86.441	ENSPTRG00000015272	RABL3	100	86.441	Pan_troglodytes
ENSSLDG00000021899	rabl3	100	86.864	ENSPANG00000001339	RABL3	100	86.864	Papio_anubis
ENSSLDG00000021899	rabl3	100	94.421	ENSPKIG00000007818	rabl3	100	94.421	Paramormyrops_kingsleyae
ENSSLDG00000021899	rabl3	100	87.288	ENSPSIG00000011358	RABL3	100	87.288	Pelodiscus_sinensis
ENSSLDG00000021899	rabl3	100	91.416	ENSPMGG00000015794	rabl3	100	91.416	Periophthalmus_magnuspinnatus
ENSSLDG00000021899	rabl3	100	84.322	ENSPEMG00000016913	Rabl3	100	84.322	Peromyscus_maniculatus_bairdii
ENSSLDG00000021899	rabl3	100	86.441	ENSPCIG00000018922	RABL3	100	86.441	Phascolarctos_cinereus
ENSSLDG00000021899	rabl3	100	95.279	ENSPFOG00000008586	rabl3	100	95.279	Poecilia_formosa
ENSSLDG00000021899	rabl3	100	95.279	ENSPLAG00000014482	rabl3	100	95.279	Poecilia_latipinna
ENSSLDG00000021899	rabl3	100	95.279	ENSPMEG00000002295	rabl3	100	95.279	Poecilia_mexicana
ENSSLDG00000021899	rabl3	100	95.279	ENSPREG00000014815	rabl3	100	95.279	Poecilia_reticulata
ENSSLDG00000021899	rabl3	100	86.864	ENSPPYG00000013501	RABL3	100	86.864	Pongo_abelii
ENSSLDG00000021899	rabl3	100	88.136	ENSPCOG00000022230	RABL3	100	88.136	Propithecus_coquereli
ENSSLDG00000021899	rabl3	100	86.441	ENSPVAG00000010013	RABL3	100	86.441	Pteropus_vampyrus
ENSSLDG00000021899	rabl3	100	98.712	ENSPNYG00000006659	rabl3	100	98.712	Pundamilia_nyererei
ENSSLDG00000021899	rabl3	100	97.425	ENSPNAG00000000748	rabl3	100	97.425	Pygocentrus_nattereri
ENSSLDG00000021899	rabl3	100	83.898	ENSRNOG00000026085	Rabl3	100	83.898	Rattus_norvegicus
ENSSLDG00000021899	rabl3	100	86.864	ENSRBIG00000040941	RABL3	100	86.864	Rhinopithecus_bieti
ENSSLDG00000021899	rabl3	100	86.864	ENSRROG00000043745	RABL3	100	86.864	Rhinopithecus_roxellana
ENSSLDG00000021899	rabl3	100	88.559	ENSSBOG00000004022	RABL3	100	88.559	Saimiri_boliviensis_boliviensis
ENSSLDG00000021899	rabl3	100	85.593	ENSSHAG00000012233	RABL3	100	85.593	Sarcophilus_harrisii
ENSSLDG00000021899	rabl3	100	95.279	ENSSFOG00015010171	rabl3	100	95.279	Scleropages_formosus
ENSSLDG00000021899	rabl3	100	97.863	ENSSMAG00000002403	rabl3	100	97.863	Scophthalmus_maximus
ENSSLDG00000021899	rabl3	100	99.571	ENSSDUG00000012078	rabl3	100	99.571	Seriola_dumerili
ENSSLDG00000021899	rabl3	100	87.712	ENSSARG00000008316	RABL3	100	87.712	Sorex_araneus
ENSSLDG00000021899	rabl3	100	87.288	ENSSPUG00000017490	RABL3	100	87.288	Sphenodon_punctatus
ENSSLDG00000021899	rabl3	100	99.142	ENSSPAG00000011642	rabl3	100	99.142	Stegastes_partitus
ENSSLDG00000021899	rabl3	100	88.559	ENSSSCG00000035258	RABL3	100	88.559	Sus_scrofa
ENSSLDG00000021899	rabl3	100	86.017	ENSTGUG00000013374	RABL3	100	86.017	Taeniopygia_guttata
ENSSLDG00000021899	rabl3	91	92.632	ENSTRUG00000007846	RABL3	100	98.438	Takifugu_rubripes
ENSSLDG00000021899	rabl3	100	74.576	ENSTBEG00000005153	RABL3	100	74.576	Tupaia_belangeri
ENSSLDG00000021899	rabl3	100	87.288	ENSUAMG00000005299	RABL3	100	87.288	Ursus_americanus
ENSSLDG00000021899	rabl3	100	86.864	ENSUMAG00000025256	RABL3	89	86.864	Ursus_maritimus
ENSSLDG00000021899	rabl3	100	88.559	ENSVPAG00000003776	RABL3	100	88.559	Vicugna_pacos
ENSSLDG00000021899	rabl3	100	88.136	ENSVVUG00000022300	RABL3	89	88.136	Vulpes_vulpes
ENSSLDG00000021899	rabl3	100	94.850	ENSXMAG00000003244	rabl3	100	94.850	Xiphophorus_maculatus