EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000021924 (Gene tree)
Gene ID: -
Gene Symbol: NCBP1
Alias: CBP80|NCBP|Sto1
Full Name: nuclear cap binding protein subunit 1
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 8644 bases
Position: chrPEQF01099417.1:1523856-1532499
Accession: 111644638
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000028369	MIF4G_like	PF09088.11	3.1e-37	1	1
ENSSLDP00000028369	MIF4G_like_2	PF09090.11	2.1e-86	1	1
ENSSLDP00000028369	MIF4G	PF02854.19	1.6e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000029212	NCBP1-201	2565	XM_023393570	ENSSLDP00000028369	795 (aa)	XP_023249338	UPI000C6FA160

Gene Model

Click here to download ENSSLDG00000021924's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000021924's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000021924	NCBP1	99	82.620	ENSG00000136937	NCBP1	99	82.997	Homo_sapiens
ENSSLDG00000021924	NCBP1	100	97.233	ENSAPOG00000008002	NCBP1	100	97.233	Acanthochromis_polyacanthus
ENSSLDG00000021924	NCBP1	99	82.663	ENSAMEG00000004763	NCBP1	99	83.040	Ailuropoda_melanoleuca
ENSSLDG00000021924	NCBP1	100	96.226	ENSACIG00000000274	NCBP1	100	96.226	Amphilophus_citrinellus
ENSSLDG00000021924	NCBP1	100	96.855	ENSAOCG00000021148	NCBP1	100	96.855	Amphiprion_ocellaris
ENSSLDG00000021924	NCBP1	100	96.855	ENSAPEG00000001701	NCBP1	100	96.855	Amphiprion_percula
ENSSLDG00000021924	NCBP1	100	96.604	ENSATEG00000006929	NCBP1	100	96.604	Anabas_testudineus
ENSSLDG00000021924	NCBP1	95	83.289	ENSAPLG00000016318	NCBP1	99	83.421	Anas_platyrhynchos
ENSSLDG00000021924	NCBP1	99	83.271	ENSACAG00000004409	NCBP1	87	83.396	Anolis_carolinensis
ENSSLDG00000021924	NCBP1	99	80.605	ENSANAG00000025744	NCBP1	99	82.483	Aotus_nancymaae
ENSSLDG00000021924	NCBP1	100	95.849	ENSACLG00000014812	NCBP1	100	95.849	Astatotilapia_calliptera
ENSSLDG00000021924	NCBP1	100	91.217	ENSAMXG00000016364	NCBP1	100	91.217	Astyanax_mexicanus
ENSSLDG00000021924	NCBP1	99	82.746	ENSBTAG00000009732	NCBP1	99	87.613	Bos_taurus
ENSSLDG00000021924	NCBP1	100	36.408	WBGene00018156	ncbp-1	100	36.408	Caenorhabditis_elegans
ENSSLDG00000021924	NCBP1	99	82.746	ENSCJAG00000010840	NCBP1	98	87.379	Callithrix_jacchus
ENSSLDG00000021924	NCBP1	99	82.872	ENSCAFG00000002445	NCBP1	99	83.249	Canis_familiaris
ENSSLDG00000021924	NCBP1	98	82.737	ENSCAFG00020017997	NCBP1	96	89.027	Canis_lupus_dingo
ENSSLDG00000021924	NCBP1	99	82.620	ENSCHIG00000020139	NCBP1	99	82.997	Capra_hircus
ENSSLDG00000021924	NCBP1	50	88.750	ENSTSYG00000011914	NCBP1	98	87.147	Carlito_syrichta
ENSSLDG00000021924	NCBP1	81	74.923	ENSCAPG00000014252	NCBP1	90	74.923	Cavia_aperea
ENSSLDG00000021924	NCBP1	95	82.034	ENSCPOG00000012573	NCBP1	98	82.431	Cavia_porcellus
ENSSLDG00000021924	NCBP1	99	82.620	ENSCCAG00000032297	NCBP1	99	82.997	Cebus_capucinus
ENSSLDG00000021924	NCBP1	99	82.620	ENSCATG00000010052	NCBP1	99	82.997	Cercocebus_atys
ENSSLDG00000021924	NCBP1	99	82.620	ENSCLAG00000014339	NCBP1	99	82.997	Chinchilla_lanigera
ENSSLDG00000021924	NCBP1	99	82.620	ENSCSAG00000010929	NCBP1	99	82.997	Chlorocebus_sabaeus
ENSSLDG00000021924	NCBP1	89	82.075	ENSCHOG00000010332	NCBP1	91	78.261	Choloepus_hoffmanni
ENSSLDG00000021924	NCBP1	99	81.108	ENSCPBG00000024344	NCBP1	99	83.747	Chrysemys_picta_bellii
ENSSLDG00000021924	NCBP1	99	53.904	ENSCING00000008990	-	99	53.904	Ciona_intestinalis
ENSSLDG00000021924	NCBP1	99	53.375	ENSCSAVG00000005300	-	99	53.093	Ciona_savignyi
ENSSLDG00000021924	NCBP1	99	82.620	ENSCANG00000036913	NCBP1	99	82.997	Colobus_angolensis_palliatus
ENSSLDG00000021924	NCBP1	99	82.242	ENSCGRG00001015771	Ncbp1	99	82.620	Cricetulus_griseus_chok1gshd
ENSSLDG00000021924	NCBP1	99	82.270	ENSCGRG00000010311	Ncbp1	99	82.653	Cricetulus_griseus_crigri
ENSSLDG00000021924	NCBP1	100	96.101	ENSCSEG00000012377	NCBP1	100	96.101	Cynoglossus_semilaevis
ENSSLDG00000021924	NCBP1	100	94.724	ENSCVAG00000008795	NCBP1	100	94.724	Cyprinodon_variegatus
ENSSLDG00000021924	NCBP1	99	81.864	ENSDNOG00000006885	NCBP1	99	82.242	Dasypus_novemcinctus
ENSSLDG00000021924	NCBP1	99	78.571	ENSDORG00000013652	Ncbp1	99	78.947	Dipodomys_ordii
ENSSLDG00000021924	NCBP1	99	57.178	FBgn0022942	Cbp80	99	57.822	Drosophila_melanogaster
ENSSLDG00000021924	NCBP1	83	34.021	FBgn0038887	CG7907	87	34.021	Drosophila_melanogaster
ENSSLDG00000021924	NCBP1	89	78.571	ENSETEG00000009705	NCBP1	89	78.571	Echinops_telfairi
ENSSLDG00000021924	NCBP1	99	73.585	ENSEBUG00000008386	NCBP1	99	73.585	Eptatretus_burgeri
ENSSLDG00000021924	NCBP1	99	82.368	ENSEASG00005022795	NCBP1	99	82.746	Equus_asinus_asinus
ENSSLDG00000021924	NCBP1	99	82.494	ENSECAG00000013847	NCBP1	99	82.872	Equus_caballus
ENSSLDG00000021924	NCBP1	95	78.996	ENSEEUG00000015973	NCBP1	99	79.524	Erinaceus_europaeus
ENSSLDG00000021924	NCBP1	100	91.583	ENSELUG00000022519	NCBP1	100	91.583	Esox_lucius
ENSSLDG00000021924	NCBP1	99	82.746	ENSFCAG00000001206	NCBP1	99	83.123	Felis_catus
ENSSLDG00000021924	NCBP1	98	83.694	ENSFALG00000001193	NCBP1	99	84.478	Ficedula_albicollis
ENSSLDG00000021924	NCBP1	99	82.368	ENSFDAG00000010864	NCBP1	99	82.746	Fukomys_damarensis
ENSSLDG00000021924	NCBP1	100	95.101	ENSFHEG00000000655	NCBP1	100	95.101	Fundulus_heteroclitus
ENSSLDG00000021924	NCBP1	100	91.457	ENSGMOG00000008653	NCBP1	99	91.457	Gadus_morhua
ENSSLDG00000021924	NCBP1	98	84.271	ENSGALG00000002087	NCBP1	99	83.920	Gallus_gallus
ENSSLDG00000021924	NCBP1	100	96.231	ENSGAFG00000017787	NCBP1	100	96.231	Gambusia_affinis
ENSSLDG00000021924	NCBP1	100	94.737	ENSGACG00000016772	NCBP1	99	94.737	Gasterosteus_aculeatus
ENSSLDG00000021924	NCBP1	99	83.375	ENSGAGG00000019483	NCBP1	99	84.025	Gopherus_agassizii
ENSSLDG00000021924	NCBP1	99	82.620	ENSGGOG00000001376	NCBP1	99	82.997	Gorilla_gorilla
ENSSLDG00000021924	NCBP1	100	95.849	ENSHBUG00000020843	NCBP1	100	95.849	Haplochromis_burtoni
ENSSLDG00000021924	NCBP1	99	72.236	ENSHGLG00000018112	-	99	72.236	Heterocephalus_glaber_female
ENSSLDG00000021924	NCBP1	99	82.494	ENSHGLG00000001882	NCBP1	99	82.872	Heterocephalus_glaber_female
ENSSLDG00000021924	NCBP1	99	71.985	ENSHGLG00100017373	-	99	71.985	Heterocephalus_glaber_male
ENSSLDG00000021924	NCBP1	99	82.494	ENSHGLG00100013014	NCBP1	99	82.872	Heterocephalus_glaber_male
ENSSLDG00000021924	NCBP1	74	88.533	ENSHCOG00000000204	NCBP1	87	88.533	Hippocampus_comes
ENSSLDG00000021924	NCBP1	100	90.201	ENSIPUG00000007275	ncbp1	100	90.201	Ictalurus_punctatus
ENSSLDG00000021924	NCBP1	99	82.746	ENSSTOG00000002695	NCBP1	99	83.123	Ictidomys_tridecemlineatus
ENSSLDG00000021924	NCBP1	100	95.346	ENSKMAG00000003594	NCBP1	100	95.346	Kryptolebias_marmoratus
ENSSLDG00000021924	NCBP1	100	93.921	ENSLBEG00000011661	NCBP1	100	93.921	Labrus_bergylta
ENSSLDG00000021924	NCBP1	99	78.331	ENSLACG00000013955	NCBP1	99	78.731	Latimeria_chalumnae
ENSSLDG00000021924	NCBP1	99	76.837	ENSLOCG00000009579	NCBP1	99	77.335	Lepisosteus_oculatus
ENSSLDG00000021924	NCBP1	99	82.620	ENSLAFG00000005999	NCBP1	99	82.997	Loxodonta_africana
ENSSLDG00000021924	NCBP1	99	82.620	ENSMFAG00000030994	NCBP1	99	82.997	Macaca_fascicularis
ENSSLDG00000021924	NCBP1	98	82.503	ENSMMUG00000012281	NCBP1	99	82.886	Macaca_mulatta
ENSSLDG00000021924	NCBP1	99	82.620	ENSMNEG00000042790	NCBP1	99	82.997	Macaca_nemestrina
ENSSLDG00000021924	NCBP1	99	82.620	ENSMLEG00000030374	NCBP1	99	82.997	Mandrillus_leucophaeus
ENSSLDG00000021924	NCBP1	100	96.101	ENSMAMG00000014806	NCBP1	100	96.101	Mastacembelus_armatus
ENSSLDG00000021924	NCBP1	100	95.849	ENSMZEG00005003469	NCBP1	100	95.849	Maylandia_zebra
ENSSLDG00000021924	NCBP1	97	93.798	ENSMZEG00005009290	-	100	93.798	Maylandia_zebra
ENSSLDG00000021924	NCBP1	98	82.120	ENSMAUG00000020583	Ncbp1	99	82.503	Mesocricetus_auratus
ENSSLDG00000021924	NCBP1	99	82.116	ENSMICG00000012682	NCBP1	99	82.494	Microcebus_murinus
ENSSLDG00000021924	NCBP1	99	82.116	ENSMOCG00000015818	Ncbp1	99	82.494	Microtus_ochrogaster
ENSSLDG00000021924	NCBP1	91	94.313	ENSMMOG00000002610	NCBP1	100	94.313	Mola_mola
ENSSLDG00000021924	NCBP1	99	82.494	ENSMODG00000003202	NCBP1	99	82.620	Monodelphis_domestica
ENSSLDG00000021924	NCBP1	100	96.101	ENSMALG00000003547	NCBP1	100	96.101	Monopterus_albus
ENSSLDG00000021924	NCBP1	99	82.368	MGP_CAROLIEiJ_G0025982	Ncbp1	99	82.746	Mus_caroli
ENSSLDG00000021924	NCBP1	99	82.368	ENSMUSG00000028330	Ncbp1	99	82.746	Mus_musculus
ENSSLDG00000021924	NCBP1	99	82.368	MGP_PahariEiJ_G0028318	Ncbp1	99	82.746	Mus_pahari
ENSSLDG00000021924	NCBP1	99	82.368	MGP_SPRETEiJ_G0026945	Ncbp1	99	82.746	Mus_spretus
ENSSLDG00000021924	NCBP1	99	82.997	ENSMPUG00000006399	NCBP1	99	83.375	Mustela_putorius_furo
ENSSLDG00000021924	NCBP1	98	81.481	ENSMLUG00000015201	NCBP1	99	81.865	Myotis_lucifugus
ENSSLDG00000021924	NCBP1	99	82.997	ENSNGAG00000014101	Ncbp1	99	83.014	Nannospalax_galili
ENSSLDG00000021924	NCBP1	76	96.916	ENSNBRG00000014674	NCBP1	97	96.916	Neolamprologus_brichardi
ENSSLDG00000021924	NCBP1	99	82.620	ENSNLEG00000016909	NCBP1	99	82.997	Nomascus_leucogenys
ENSSLDG00000021924	NCBP1	89	81.837	ENSMEUG00000010672	NCBP1	90	81.837	Notamacropus_eugenii
ENSSLDG00000021924	NCBP1	84	74.411	ENSOPRG00000002144	-	88	75.084	Ochotona_princeps
ENSSLDG00000021924	NCBP1	99	82.494	ENSODEG00000003232	NCBP1	99	82.872	Octodon_degus
ENSSLDG00000021924	NCBP1	100	95.849	ENSONIG00000001502	NCBP1	100	95.849	Oreochromis_niloticus
ENSSLDG00000021924	NCBP1	78	85.233	ENSOANG00000001918	NCBP1	100	85.233	Ornithorhynchus_anatinus
ENSSLDG00000021924	NCBP1	98	82.308	ENSOCUG00000013853	NCBP1	97	82.692	Oryctolagus_cuniculus
ENSSLDG00000021924	NCBP1	100	94.493	ENSORLG00000011008	NCBP1	100	94.493	Oryzias_latipes
ENSSLDG00000021924	NCBP1	100	94.743	ENSORLG00020017455	NCBP1	100	94.743	Oryzias_latipes_hni
ENSSLDG00000021924	NCBP1	100	94.618	ENSORLG00015012127	NCBP1	100	94.618	Oryzias_latipes_hsok
ENSSLDG00000021924	NCBP1	100	95.119	ENSOMEG00000020698	NCBP1	100	95.119	Oryzias_melastigma
ENSSLDG00000021924	NCBP1	99	82.538	ENSOGAG00000013888	NCBP1	99	82.915	Otolemur_garnettii
ENSSLDG00000021924	NCBP1	99	82.620	ENSOARG00000011233	NCBP1	99	82.997	Ovis_aries
ENSSLDG00000021924	NCBP1	99	82.620	ENSPPAG00000026462	NCBP1	99	82.997	Pan_paniscus
ENSSLDG00000021924	NCBP1	99	82.872	ENSPPRG00000022574	NCBP1	99	83.249	Panthera_pardus
ENSSLDG00000021924	NCBP1	99	82.872	ENSPTIG00000018507	NCBP1	99	83.249	Panthera_tigris_altaica
ENSSLDG00000021924	NCBP1	99	82.620	ENSPTRG00000021167	NCBP1	99	82.997	Pan_troglodytes
ENSSLDG00000021924	NCBP1	99	82.620	ENSPANG00000025591	NCBP1	99	82.997	Papio_anubis
ENSSLDG00000021924	NCBP1	99	86.902	ENSPKIG00000015861	NCBP1	99	86.902	Paramormyrops_kingsleyae
ENSSLDG00000021924	NCBP1	64	81.800	ENSPSIG00000009558	NCBP1	99	82.812	Pelodiscus_sinensis
ENSSLDG00000021924	NCBP1	100	90.476	ENSPMGG00000020476	NCBP1	100	90.476	Periophthalmus_magnuspinnatus
ENSSLDG00000021924	NCBP1	99	81.864	ENSPEMG00000020105	Ncbp1	99	82.242	Peromyscus_maniculatus_bairdii
ENSSLDG00000021924	NCBP1	99	68.125	ENSPMAG00000005533	NCBP1	99	68.125	Petromyzon_marinus
ENSSLDG00000021924	NCBP1	99	82.368	ENSPCIG00000015800	NCBP1	99	84.581	Phascolarctos_cinereus
ENSSLDG00000021924	NCBP1	100	95.870	ENSPFOG00000004158	NCBP1	100	95.870	Poecilia_formosa
ENSSLDG00000021924	NCBP1	100	96.231	ENSPLAG00000020002	NCBP1	100	96.231	Poecilia_latipinna
ENSSLDG00000021924	NCBP1	100	96.231	ENSPMEG00000019821	NCBP1	100	96.231	Poecilia_mexicana
ENSSLDG00000021924	NCBP1	100	95.609	ENSPREG00000006035	NCBP1	100	95.609	Poecilia_reticulata
ENSSLDG00000021924	NCBP1	99	82.620	ENSPPYG00000019426	NCBP1	99	82.997	Pongo_abelii
ENSSLDG00000021924	NCBP1	90	80.060	ENSPCAG00000009943	NCBP1	90	80.060	Procavia_capensis
ENSSLDG00000021924	NCBP1	82	87.500	ENSPCOG00000020024	NCBP1	98	87.500	Propithecus_coquereli
ENSSLDG00000021924	NCBP1	99	82.494	ENSPVAG00000005924	NCBP1	99	82.872	Pteropus_vampyrus
ENSSLDG00000021924	NCBP1	91	94.861	ENSPNYG00000002140	NCBP1	99	94.861	Pundamilia_nyererei
ENSSLDG00000021924	NCBP1	100	90.590	ENSPNAG00000027753	NCBP1	100	90.590	Pygocentrus_nattereri
ENSSLDG00000021924	NCBP1	99	82.368	ENSRNOG00000023605	Ncbp1	99	82.746	Rattus_norvegicus
ENSSLDG00000021924	NCBP1	99	82.620	ENSRBIG00000043175	NCBP1	99	82.997	Rhinopithecus_bieti
ENSSLDG00000021924	NCBP1	99	82.620	ENSRROG00000029767	NCBP1	99	82.997	Rhinopithecus_roxellana
ENSSLDG00000021924	NCBP1	99	82.620	ENSSBOG00000019378	NCBP1	98	87.805	Saimiri_boliviensis_boliviensis
ENSSLDG00000021924	NCBP1	70	79.771	ENSSHAG00000015882	NCBP1	72	80.153	Sarcophilus_harrisii
ENSSLDG00000021924	NCBP1	98	87.101	ENSSFOG00015001872	NCBP1	99	86.146	Scleropages_formosus
ENSSLDG00000021924	NCBP1	100	95.220	ENSSMAG00000007463	NCBP1	100	95.220	Scophthalmus_maximus
ENSSLDG00000021924	NCBP1	100	98.994	ENSSDUG00000007019	NCBP1	100	99.863	Seriola_dumerili
ENSSLDG00000021924	NCBP1	85	70.996	ENSSARG00000007274	NCBP1	86	71.645	Sorex_araneus
ENSSLDG00000021924	NCBP1	99	77.834	ENSSPUG00000008609	NCBP1	99	77.834	Sphenodon_punctatus
ENSSLDG00000021924	NCBP1	100	97.610	ENSSPAG00000012550	NCBP1	100	97.610	Stegastes_partitus
ENSSLDG00000021924	NCBP1	99	82.620	ENSSSCG00000005366	NCBP1	99	82.997	Sus_scrofa
ENSSLDG00000021924	NCBP1	99	78.463	ENSTGUG00000001472	NCBP1	99	79.497	Taeniopygia_guttata
ENSSLDG00000021924	NCBP1	100	93.962	ENSTRUG00000005287	NCBP1	100	93.962	Takifugu_rubripes
ENSSLDG00000021924	NCBP1	99	80.101	ENSTBEG00000004035	NCBP1	99	80.479	Tupaia_belangeri
ENSSLDG00000021924	NCBP1	88	85.222	ENSTTRG00000000507	NCBP1	88	85.222	Tursiops_truncatus
ENSSLDG00000021924	NCBP1	99	82.746	ENSUAMG00000005471	NCBP1	99	83.123	Ursus_americanus
ENSSLDG00000021924	NCBP1	97	80.595	ENSUMAG00000011865	NCBP1	99	82.678	Ursus_maritimus
ENSSLDG00000021924	NCBP1	99	79.219	ENSVPAG00000010537	NCBP1	99	79.597	Vicugna_pacos
ENSSLDG00000021924	NCBP1	99	82.872	ENSVVUG00000019725	NCBP1	99	83.249	Vulpes_vulpes
ENSSLDG00000021924	NCBP1	99	79.093	ENSXETG00000010179	ncbp1	99	79.093	Xenopus_tropicalis
ENSSLDG00000021924	NCBP1	100	95.980	ENSXMAG00000018253	NCBP1	100	95.980	Xiphophorus_maculatus