EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000022028 (Gene tree)
Gene ID: -
Gene Symbol: thumpd3
Alias: cb255|sb:cb255|zgc:163086
Full Name: THUMP domain containing 3
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 9223 bases
Position: chrPEQF01099001.1:78465-87687
Accession: 111660835
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000028489	THUMP	PF02926.17	2e-10	1	1
ENSSLDP00000028489	UPF0020	PF01170.18	1e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000029332	-	1674	XM_023414244	ENSSLDP00000028489	490 (aa)	XP_023270012	UPI000C6F8E87

Gene Model

Click here to download ENSSLDG00000022028's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000022028's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000022028	thumpd3	94	56.875	ENSG00000134077	THUMPD3	94	56.875	Homo_sapiens
ENSSLDG00000022028	thumpd3	97	86.486	ENSAPOG00000015836	thumpd3	99	86.486	Acanthochromis_polyacanthus
ENSSLDG00000022028	thumpd3	94	58.799	ENSAMEG00000011321	THUMPD3	94	58.799	Ailuropoda_melanoleuca
ENSSLDG00000022028	thumpd3	73	30.570	ENSAMEG00000008664	THUMPD2	79	30.570	Ailuropoda_melanoleuca
ENSSLDG00000022028	thumpd3	99	85.051	ENSACIG00000020096	thumpd3	99	85.051	Amphilophus_citrinellus
ENSSLDG00000022028	thumpd3	100	84.073	ENSAOCG00000004399	thumpd3	100	84.073	Amphiprion_ocellaris
ENSSLDG00000022028	thumpd3	100	85.081	ENSAPEG00000016740	thumpd3	100	85.081	Amphiprion_percula
ENSSLDG00000022028	thumpd3	100	84.073	ENSATEG00000005345	thumpd3	100	84.073	Anabas_testudineus
ENSSLDG00000022028	thumpd3	77	63.038	ENSAPLG00000003598	THUMPD3	99	63.265	Anas_platyrhynchos
ENSSLDG00000022028	thumpd3	93	58.149	ENSACAG00000014974	THUMPD3	95	58.753	Anolis_carolinensis
ENSSLDG00000022028	thumpd3	94	56.082	ENSANAG00000002365	THUMPD3	95	56.701	Aotus_nancymaae
ENSSLDG00000022028	thumpd3	87	57.512	ENSACLG00000013504	-	89	57.512	Astatotilapia_calliptera
ENSSLDG00000022028	thumpd3	100	84.677	ENSACLG00000023333	thumpd3	100	84.677	Astatotilapia_calliptera
ENSSLDG00000022028	thumpd3	94	71.520	ENSAMXG00000015683	thumpd3	98	71.520	Astyanax_mexicanus
ENSSLDG00000022028	thumpd3	94	60.417	ENSBTAG00000003112	THUMPD3	94	60.417	Bos_taurus
ENSSLDG00000022028	thumpd3	88	35.469	WBGene00010846	M04B2.2	99	35.698	Caenorhabditis_elegans
ENSSLDG00000022028	thumpd3	94	56.695	ENSCJAG00000015949	THUMPD3	94	56.695	Callithrix_jacchus
ENSSLDG00000022028	thumpd3	89	60.954	ENSCAFG00000005499	THUMPD3	90	60.954	Canis_familiaris
ENSSLDG00000022028	thumpd3	74	59.640	ENSCAFG00000008060	-	93	59.640	Canis_familiaris
ENSSLDG00000022028	thumpd3	79	60.775	ENSCAFG00020025887	-	94	60.775	Canis_lupus_dingo
ENSSLDG00000022028	thumpd3	89	60.954	ENSCAFG00020008895	-	90	60.954	Canis_lupus_dingo
ENSSLDG00000022028	thumpd3	94	60.543	ENSCHIG00000024037	THUMPD3	93	60.543	Capra_hircus
ENSSLDG00000022028	thumpd3	63	30.030	ENSTSYG00000010555	THUMPD2	76	30.030	Carlito_syrichta
ENSSLDG00000022028	thumpd3	94	56.965	ENSTSYG00000000159	THUMPD3	95	56.965	Carlito_syrichta
ENSSLDG00000022028	thumpd3	86	40.284	ENSCAPG00000017486	THUMPD3	85	40.319	Cavia_aperea
ENSSLDG00000022028	thumpd3	92	58.936	ENSCPOG00000033287	THUMPD3	92	58.936	Cavia_porcellus
ENSSLDG00000022028	thumpd3	94	51.452	ENSCCAG00000021429	-	95	51.452	Cebus_capucinus
ENSSLDG00000022028	thumpd3	94	56.082	ENSCCAG00000027067	-	95	56.289	Cebus_capucinus
ENSSLDG00000022028	thumpd3	92	57.294	ENSCATG00000040999	THUMPD3	93	57.294	Cercocebus_atys
ENSSLDG00000022028	thumpd3	90	59.740	ENSCLAG00000000690	THUMPD3	91	59.740	Chinchilla_lanigera
ENSSLDG00000022028	thumpd3	92	57.294	ENSCSAG00000010753	THUMPD3	93	57.294	Chlorocebus_sabaeus
ENSSLDG00000022028	thumpd3	78	49.593	ENSCHOG00000012851	THUMPD3	76	49.593	Choloepus_hoffmanni
ENSSLDG00000022028	thumpd3	92	60.000	ENSCPBG00000014771	THUMPD3	95	60.370	Chrysemys_picta_bellii
ENSSLDG00000022028	thumpd3	89	40.909	ENSCSAVG00000008668	-	97	40.909	Ciona_savignyi
ENSSLDG00000022028	thumpd3	92	56.992	ENSCANG00000031901	THUMPD3	93	56.992	Colobus_angolensis_palliatus
ENSSLDG00000022028	thumpd3	90	60.606	ENSCGRG00001024117	Thumpd3	91	60.606	Cricetulus_griseus_chok1gshd
ENSSLDG00000022028	thumpd3	90	60.606	ENSCGRG00000018116	Thumpd3	91	60.606	Cricetulus_griseus_crigri
ENSSLDG00000022028	thumpd3	95	81.237	ENSCSEG00000002546	thumpd3	99	80.041	Cynoglossus_semilaevis
ENSSLDG00000022028	thumpd3	95	82.013	ENSCVAG00000001019	thumpd3	99	79.032	Cyprinodon_variegatus
ENSSLDG00000022028	thumpd3	94	66.242	ENSDARG00000059634	thumpd3	99	66.242	Danio_rerio
ENSSLDG00000022028	thumpd3	90	58.478	ENSDNOG00000047668	THUMPD3	89	59.827	Dasypus_novemcinctus
ENSSLDG00000022028	thumpd3	91	59.871	ENSDORG00000003257	Thumpd3	93	59.871	Dipodomys_ordii
ENSSLDG00000022028	thumpd3	59	53.746	ENSETEG00000020239	-	60	55.700	Echinops_telfairi
ENSSLDG00000022028	thumpd3	87	50.676	ENSEBUG00000004221	thumpd3	97	50.676	Eptatretus_burgeri
ENSSLDG00000022028	thumpd3	94	56.549	ENSEASG00005013327	THUMPD3	93	56.549	Equus_asinus_asinus
ENSSLDG00000022028	thumpd3	94	58.628	ENSECAG00000002016	THUMPD3	92	59.034	Equus_caballus
ENSSLDG00000022028	thumpd3	90	54.902	ENSEEUG00000014696	THUMPD3	91	54.902	Erinaceus_europaeus
ENSSLDG00000022028	thumpd3	90	88.129	ENSELUG00000018246	thumpd3	97	64.890	Esox_lucius
ENSSLDG00000022028	thumpd3	89	60.435	ENSFCAG00000006171	THUMPD3	90	60.435	Felis_catus
ENSSLDG00000022028	thumpd3	84	56.532	ENSFALG00000013631	THUMPD3	95	56.828	Ficedula_albicollis
ENSSLDG00000022028	thumpd3	92	58.298	ENSFDAG00000014825	THUMPD3	92	59.574	Fukomys_damarensis
ENSSLDG00000022028	thumpd3	99	82.897	ENSFHEG00000006006	thumpd3	99	82.897	Fundulus_heteroclitus
ENSSLDG00000022028	thumpd3	96	69.748	ENSGMOG00000007923	thumpd3	96	69.958	Gadus_morhua
ENSSLDG00000022028	thumpd3	92	57.290	ENSGALG00000044813	THUMPD3	97	58.025	Gallus_gallus
ENSSLDG00000022028	thumpd3	99	82.329	ENSGAFG00000021645	thumpd3	99	82.329	Gambusia_affinis
ENSSLDG00000022028	thumpd3	99	80.244	ENSGACG00000000930	thumpd3	99	83.047	Gasterosteus_aculeatus
ENSSLDG00000022028	thumpd3	92	60.412	ENSGAGG00000022750	THUMPD3	95	60.288	Gopherus_agassizii
ENSSLDG00000022028	thumpd3	94	57.261	ENSGGOG00000000604	THUMPD3	94	57.261	Gorilla_gorilla
ENSSLDG00000022028	thumpd3	100	84.677	ENSHBUG00000013405	thumpd3	100	84.677	Haplochromis_burtoni
ENSSLDG00000022028	thumpd3	92	57.996	ENSHGLG00000016200	THUMPD3	92	58.635	Heterocephalus_glaber_female
ENSSLDG00000022028	thumpd3	92	57.872	ENSHGLG00100017321	-	92	58.511	Heterocephalus_glaber_male
ENSSLDG00000022028	thumpd3	88	52.561	ENSHGLG00100000505	-	92	52.561	Heterocephalus_glaber_male
ENSSLDG00000022028	thumpd3	97	78.407	ENSHCOG00000004871	thumpd3	99	78.407	Hippocampus_comes
ENSSLDG00000022028	thumpd3	91	71.749	ENSIPUG00000019415	THUMPD3	94	70.705	Ictalurus_punctatus
ENSSLDG00000022028	thumpd3	92	60.043	ENSSTOG00000003973	THUMPD3	92	60.043	Ictidomys_tridecemlineatus
ENSSLDG00000022028	thumpd3	90	53.145	ENSJJAG00000017751	Thumpd3	89	53.930	Jaculus_jaculus
ENSSLDG00000022028	thumpd3	73	30.214	ENSJJAG00000020374	Thumpd2	77	30.214	Jaculus_jaculus
ENSSLDG00000022028	thumpd3	98	82.463	ENSKMAG00000021025	thumpd3	94	80.691	Kryptolebias_marmoratus
ENSSLDG00000022028	thumpd3	99	84.040	ENSLBEG00000012252	thumpd3	99	84.040	Labrus_bergylta
ENSSLDG00000022028	thumpd3	89	62.039	ENSLACG00000018604	THUMPD3	90	62.609	Latimeria_chalumnae
ENSSLDG00000022028	thumpd3	97	60.542	ENSLOCG00000009800	thumpd3	98	62.857	Lepisosteus_oculatus
ENSSLDG00000022028	thumpd3	92	60.043	ENSLAFG00000005103	THUMPD3	92	60.043	Loxodonta_africana
ENSSLDG00000022028	thumpd3	91	57.692	ENSMFAG00000044884	THUMPD3	92	57.692	Macaca_fascicularis
ENSSLDG00000022028	thumpd3	91	57.692	ENSMMUG00000017307	THUMPD3	92	57.692	Macaca_mulatta
ENSSLDG00000022028	thumpd3	91	57.692	ENSMNEG00000030529	THUMPD3	92	57.692	Macaca_nemestrina
ENSSLDG00000022028	thumpd3	92	57.294	ENSMLEG00000032943	THUMPD3	93	57.294	Mandrillus_leucophaeus
ENSSLDG00000022028	thumpd3	96	84.009	ENSMAMG00000023934	thumpd3	100	82.485	Mastacembelus_armatus
ENSSLDG00000022028	thumpd3	100	84.677	ENSMZEG00005010623	thumpd3	100	84.677	Maylandia_zebra
ENSSLDG00000022028	thumpd3	78	60.599	ENSMGAG00000010182	THUMPD3	100	61.905	Meleagris_gallopavo
ENSSLDG00000022028	thumpd3	90	60.129	ENSMAUG00000012250	Thumpd3	91	60.129	Mesocricetus_auratus
ENSSLDG00000022028	thumpd3	90	56.276	ENSMICG00000010095	THUMPD3	91	56.276	Microcebus_murinus
ENSSLDG00000022028	thumpd3	89	60.832	ENSMOCG00000020148	Thumpd3	90	60.832	Microtus_ochrogaster
ENSSLDG00000022028	thumpd3	99	81.967	ENSMMOG00000021791	thumpd3	99	83.404	Mola_mola
ENSSLDG00000022028	thumpd3	89	58.531	ENSMODG00000004715	-	91	58.531	Monodelphis_domestica
ENSSLDG00000022028	thumpd3	94	84.435	ENSMALG00000017316	thumpd3	99	84.435	Monopterus_albus
ENSSLDG00000022028	thumpd3	53	55.319	MGP_CAROLIEiJ_G0028714	-	58	55.319	Mus_caroli
ENSSLDG00000022028	thumpd3	91	59.488	ENSMUSG00000030264	Thumpd3	92	59.488	Mus_musculus
ENSSLDG00000022028	thumpd3	95	57.526	MGP_PahariEiJ_G0022465	Thumpd3	92	59.315	Mus_pahari
ENSSLDG00000022028	thumpd3	91	59.915	MGP_SPRETEiJ_G0029742	Thumpd3	92	59.915	Mus_spretus
ENSSLDG00000022028	thumpd3	95	57.350	ENSMPUG00000017066	-	94	57.350	Mustela_putorius_furo
ENSSLDG00000022028	thumpd3	95	52.273	ENSMPUG00000005219	-	94	52.273	Mustela_putorius_furo
ENSSLDG00000022028	thumpd3	91	57.173	ENSMLUG00000008538	THUMPD3	92	57.806	Myotis_lucifugus
ENSSLDG00000022028	thumpd3	90	59.436	ENSNGAG00000021014	-	91	59.436	Nannospalax_galili
ENSSLDG00000022028	thumpd3	90	49.558	ENSNGAG00000001549	-	89	50.559	Nannospalax_galili
ENSSLDG00000022028	thumpd3	100	84.879	ENSNBRG00000004886	thumpd3	100	84.879	Neolamprologus_brichardi
ENSSLDG00000022028	thumpd3	94	56.875	ENSNLEG00000003863	THUMPD3	95	56.875	Nomascus_leucogenys
ENSSLDG00000022028	thumpd3	81	56.604	ENSMEUG00000009819	THUMPD3	98	58.795	Notamacropus_eugenii
ENSSLDG00000022028	thumpd3	80	60.097	ENSOPRG00000002020	THUMPD3	98	60.097	Ochotona_princeps
ENSSLDG00000022028	thumpd3	69	55.587	ENSODEG00000018242	THUMPD3	100	56.145	Octodon_degus
ENSSLDG00000022028	thumpd3	100	84.476	ENSONIG00000018977	thumpd3	100	85.081	Oreochromis_niloticus
ENSSLDG00000022028	thumpd3	80	55.904	ENSOANG00000014481	THUMPD3	97	56.867	Ornithorhynchus_anatinus
ENSSLDG00000022028	thumpd3	92	59.275	ENSOCUG00000010921	THUMPD3	92	59.275	Oryctolagus_cuniculus
ENSSLDG00000022028	thumpd3	99	79.424	ENSORLG00000000676	thumpd3	99	79.424	Oryzias_latipes
ENSSLDG00000022028	thumpd3	99	80.041	ENSORLG00020007509	thumpd3	99	80.041	Oryzias_latipes_hni
ENSSLDG00000022028	thumpd3	99	80.041	ENSORLG00015003615	thumpd3	99	80.041	Oryzias_latipes_hsok
ENSSLDG00000022028	thumpd3	99	76.386	ENSOMEG00000014115	thumpd3	99	77.664	Oryzias_melastigma
ENSSLDG00000022028	thumpd3	79	58.621	ENSOGAG00000017111	THUMPD3	99	58.621	Otolemur_garnettii
ENSSLDG00000022028	thumpd3	94	60.543	ENSOARG00000007139	THUMPD3	91	60.543	Ovis_aries
ENSSLDG00000022028	thumpd3	94	56.875	ENSPPAG00000025852	THUMPD3	94	56.875	Pan_paniscus
ENSSLDG00000022028	thumpd3	93	59.197	ENSPPRG00000008071	THUMPD3	92	59.197	Panthera_pardus
ENSSLDG00000022028	thumpd3	93	59.408	ENSPTIG00000017923	THUMPD3	92	58.985	Panthera_tigris_altaica
ENSSLDG00000022028	thumpd3	73	31.510	ENSPTIG00000004118	THUMPD2	76	32.292	Panthera_tigris_altaica
ENSSLDG00000022028	thumpd3	94	56.667	ENSPTRG00000014585	THUMPD3	94	56.667	Pan_troglodytes
ENSSLDG00000022028	thumpd3	92	57.082	ENSPANG00000016253	THUMPD3	93	57.082	Papio_anubis
ENSSLDG00000022028	thumpd3	92	66.883	ENSPKIG00000014009	thumpd3	94	66.883	Paramormyrops_kingsleyae
ENSSLDG00000022028	thumpd3	92	57.350	ENSPSIG00000007370	THUMPD3	95	59.213	Pelodiscus_sinensis
ENSSLDG00000022028	thumpd3	97	76.471	ENSPMGG00000017563	thumpd3	99	76.471	Periophthalmus_magnuspinnatus
ENSSLDG00000022028	thumpd3	89	61.369	ENSPEMG00000022411	Thumpd3	90	61.369	Peromyscus_maniculatus_bairdii
ENSSLDG00000022028	thumpd3	89	52.889	ENSPMAG00000001291	thumpd3	99	53.319	Petromyzon_marinus
ENSSLDG00000022028	thumpd3	90	56.871	ENSPCIG00000002049	THUMPD3	91	57.505	Phascolarctos_cinereus
ENSSLDG00000022028	thumpd3	99	82.294	ENSPFOG00000002318	thumpd3	99	82.294	Poecilia_formosa
ENSSLDG00000022028	thumpd3	99	82.294	ENSPLAG00000014804	thumpd3	99	82.294	Poecilia_latipinna
ENSSLDG00000022028	thumpd3	99	82.294	ENSPMEG00000000582	thumpd3	99	82.294	Poecilia_mexicana
ENSSLDG00000022028	thumpd3	99	82.400	ENSPREG00000009176	thumpd3	99	82.400	Poecilia_reticulata
ENSSLDG00000022028	thumpd3	88	43.707	ENSPPYG00000017616	-	89	43.707	Pongo_abelii
ENSSLDG00000022028	thumpd3	94	56.667	ENSPPYG00000029461	THUMPD3	95	56.667	Pongo_abelii
ENSSLDG00000022028	thumpd3	73	30.155	ENSPPYG00000012470	THUMPD2	77	30.155	Pongo_abelii
ENSSLDG00000022028	thumpd3	82	59.102	ENSPCAG00000015398	THUMPD3	99	59.102	Procavia_capensis
ENSSLDG00000022028	thumpd3	81	52.998	ENSPCOG00000023618	-	94	52.998	Propithecus_coquereli
ENSSLDG00000022028	thumpd3	94	49.686	ENSPCOG00000018095	-	94	51.153	Propithecus_coquereli
ENSSLDG00000022028	thumpd3	94	59.329	ENSPVAG00000008721	THUMPD3	93	59.329	Pteropus_vampyrus
ENSSLDG00000022028	thumpd3	100	84.677	ENSPNYG00000006918	thumpd3	100	84.677	Pundamilia_nyererei
ENSSLDG00000022028	thumpd3	97	68.815	ENSPNAG00000014936	thumpd3	99	68.815	Pygocentrus_nattereri
ENSSLDG00000022028	thumpd3	89	61.233	ENSRNOG00000006941	Thumpd3	90	61.233	Rattus_norvegicus
ENSSLDG00000022028	thumpd3	92	57.384	ENSRBIG00000035954	THUMPD3	94	57.384	Rhinopithecus_bieti
ENSSLDG00000022028	thumpd3	73	30.026	ENSRROG00000031707	THUMPD2	77	30.026	Rhinopithecus_roxellana
ENSSLDG00000022028	thumpd3	92	57.173	ENSRROG00000035734	THUMPD3	94	57.173	Rhinopithecus_roxellana
ENSSLDG00000022028	thumpd3	94	55.992	ENSSBOG00000023567	THUMPD3	95	56.198	Saimiri_boliviensis_boliviensis
ENSSLDG00000022028	thumpd3	94	55.918	ENSSHAG00000014467	THUMPD3	93	58.526	Sarcophilus_harrisii
ENSSLDG00000022028	thumpd3	94	70.064	ENSSFOG00015019210	thumpd3	95	70.064	Scleropages_formosus
ENSSLDG00000022028	thumpd3	99	84.274	ENSSMAG00000000609	thumpd3	97	86.882	Scophthalmus_maximus
ENSSLDG00000022028	thumpd3	100	98.571	ENSSDUG00000012179	thumpd3	100	98.571	Seriola_dumerili
ENSSLDG00000022028	thumpd3	76	67.532	ENSSARG00000002239	THUMPD3	77	67.532	Sorex_araneus
ENSSLDG00000022028	thumpd3	90	59.623	ENSSPUG00000017461	THUMPD3	93	59.623	Sphenodon_punctatus
ENSSLDG00000022028	thumpd3	99	84.211	ENSSPAG00000008345	thumpd3	98	84.211	Stegastes_partitus
ENSSLDG00000022028	thumpd3	94	59.290	ENSSSCG00000011542	THUMPD3	94	59.290	Sus_scrofa
ENSSLDG00000022028	thumpd3	88	60.714	ENSTGUG00000010440	THUMPD3	100	60.938	Taeniopygia_guttata
ENSSLDG00000022028	thumpd3	97	73.695	ENSTRUG00000004420	thumpd3	99	73.695	Takifugu_rubripes
ENSSLDG00000022028	thumpd3	94	80.172	ENSTNIG00000014627	thumpd3	99	80.172	Tetraodon_nigroviridis
ENSSLDG00000022028	thumpd3	94	54.772	ENSTBEG00000003450	THUMPD3	94	54.772	Tupaia_belangeri
ENSSLDG00000022028	thumpd3	90	60.784	ENSTTRG00000009694	THUMPD3	91	61.002	Tursiops_truncatus
ENSSLDG00000022028	thumpd3	94	59.044	ENSUAMG00000009412	THUMPD3	93	59.044	Ursus_americanus
ENSSLDG00000022028	thumpd3	73	30.729	ENSUMAG00000013316	THUMPD2	77	30.333	Ursus_maritimus
ENSSLDG00000022028	thumpd3	94	60.738	ENSUMAG00000019241	THUMPD3	93	60.954	Ursus_maritimus
ENSSLDG00000022028	thumpd3	74	58.268	ENSVPAG00000002855	THUMPD3	91	58.268	Vicugna_pacos
ENSSLDG00000022028	thumpd3	89	60.521	ENSVVUG00000025278	THUMPD3	90	60.521	Vulpes_vulpes
ENSSLDG00000022028	thumpd3	91	58.369	ENSXETG00000001447	thumpd3	91	58.369	Xenopus_tropicalis
ENSSLDG00000022028	thumpd3	97	83.505	ENSXCOG00000000159	thumpd3	99	84.355	Xiphophorus_couchianus
ENSSLDG00000022028	thumpd3	99	82.164	ENSXMAG00000001423	thumpd3	99	82.164	Xiphophorus_maculatus