EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000022046 (Gene tree)
Gene ID: -
Gene Symbol: edc3
Alias: im:7151288|lsm16|wu:fb82d07|yjdc|zgc:112006
Full Name: enhancer of mRNA-decapping protein 3-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 8092 bases
Position: chrPEQF01098437.1:25936-34027
Accession: 111652366
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000028537	FDF	PF09532.10	1.4e-10	1	1
ENSSLDP00000028525	FDF	PF09532.10	1.6e-10	1	1
ENSSLDP00000028537	LSM14	PF12701.7	1.6e-10	1	1
ENSSLDP00000028525	LSM14	PF12701.7	1.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000029380	-	1595	XM_023402613	ENSSLDP00000028537	478 (aa)	XP_023258381	UPI000C6F9430
ENSSLDT00000029370	-	2549	-	ENSSLDP00000028525	523 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000022046's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000022046's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000022046	edc3	100	69.216	ENSG00000179151	EDC3	100	79.630	Homo_sapiens
ENSSLDG00000022046	edc3	100	59.717	ENSAPOG00000008655	EDC3	100	59.514	Acanthochromis_polyacanthus
ENSSLDG00000022046	edc3	100	95.816	ENSAPOG00000010791	edc3	100	95.816	Acanthochromis_polyacanthus
ENSSLDG00000022046	edc3	100	69.608	ENSAMEG00000008963	EDC3	100	69.020	Ailuropoda_melanoleuca
ENSSLDG00000022046	edc3	99	66.064	ENSACIG00000005330	EDC3	100	65.932	Amphilophus_citrinellus
ENSSLDG00000022046	edc3	100	93.515	ENSACIG00000017751	edc3	100	93.515	Amphilophus_citrinellus
ENSSLDG00000022046	edc3	100	96.234	ENSAOCG00000005431	edc3	100	96.234	Amphiprion_ocellaris
ENSSLDG00000022046	edc3	100	65.839	ENSAOCG00000009103	-	100	65.839	Amphiprion_ocellaris
ENSSLDG00000022046	edc3	100	96.234	ENSAPEG00000000968	edc3	100	96.234	Amphiprion_percula
ENSSLDG00000022046	edc3	100	65.702	ENSAPEG00000007841	EDC3	100	65.217	Amphiprion_percula
ENSSLDG00000022046	edc3	100	67.562	ENSATEG00000004205	-	100	67.562	Anabas_testudineus
ENSSLDG00000022046	edc3	100	95.816	ENSATEG00000015505	edc3	100	95.816	Anabas_testudineus
ENSSLDG00000022046	edc3	89	69.604	ENSAPLG00000008957	EDC3	100	69.163	Anas_platyrhynchos
ENSSLDG00000022046	edc3	77	68.434	ENSACAG00000000460	-	100	68.434	Anolis_carolinensis
ENSSLDG00000022046	edc3	100	70.138	ENSANAG00000024078	EDC3	100	69.412	Aotus_nancymaae
ENSSLDG00000022046	edc3	100	92.678	ENSACLG00000007232	edc3	100	92.678	Astatotilapia_calliptera
ENSSLDG00000022046	edc3	100	66.183	ENSACLG00000018776	-	100	66.183	Astatotilapia_calliptera
ENSSLDG00000022046	edc3	100	82.143	ENSAMXG00000001589	edc3	100	81.349	Astyanax_mexicanus
ENSSLDG00000022046	edc3	100	69.941	ENSBTAG00000007308	EDC3	100	69.216	Bos_taurus
ENSSLDG00000022046	edc3	100	69.412	ENSCJAG00000017681	EDC3	100	69.412	Callithrix_jacchus
ENSSLDG00000022046	edc3	100	69.155	ENSCAFG00000017935	EDC3	100	68.824	Canis_familiaris
ENSSLDG00000022046	edc3	100	69.155	ENSCAFG00020003909	EDC3	100	68.824	Canis_lupus_dingo
ENSSLDG00000022046	edc3	100	70.138	ENSCHIG00000023658	EDC3	100	69.412	Capra_hircus
ENSSLDG00000022046	edc3	100	69.412	ENSTSYG00000004822	EDC3	100	69.412	Carlito_syrichta
ENSSLDG00000022046	edc3	100	69.804	ENSCPOG00000015595	EDC3	100	69.804	Cavia_porcellus
ENSSLDG00000022046	edc3	100	69.216	ENSCCAG00000021663	EDC3	100	69.216	Cebus_capucinus
ENSSLDG00000022046	edc3	100	69.412	ENSCATG00000037511	EDC3	100	69.412	Cercocebus_atys
ENSSLDG00000022046	edc3	100	69.608	ENSCLAG00000005700	EDC3	100	69.608	Chinchilla_lanigera
ENSSLDG00000022046	edc3	100	69.412	ENSCSAG00000014239	EDC3	100	69.412	Chlorocebus_sabaeus
ENSSLDG00000022046	edc3	100	70.727	ENSCPBG00000024239	EDC3	100	70.588	Chrysemys_picta_bellii
ENSSLDG00000022046	edc3	100	39.370	ENSCING00000022142	-	99	39.293	Ciona_intestinalis
ENSSLDG00000022046	edc3	100	69.412	ENSCANG00000028699	EDC3	100	69.412	Colobus_angolensis_palliatus
ENSSLDG00000022046	edc3	100	69.412	ENSCGRG00001013874	Edc3	100	69.412	Cricetulus_griseus_chok1gshd
ENSSLDG00000022046	edc3	100	69.412	ENSCGRG00000011885	Edc3	100	69.412	Cricetulus_griseus_crigri
ENSSLDG00000022046	edc3	99	92.662	ENSCSEG00000012996	edc3	99	92.662	Cynoglossus_semilaevis
ENSSLDG00000022046	edc3	100	91.632	ENSCVAG00000008023	edc3	100	91.632	Cyprinodon_variegatus
ENSSLDG00000022046	edc3	99	78.218	ENSDARG00000051931	edc3	99	77.624	Danio_rerio
ENSSLDG00000022046	edc3	100	60.659	ENSDNOG00000030661	EDC3	100	60.659	Dasypus_novemcinctus
ENSSLDG00000022046	edc3	68	79.630	ENSETEG00000002398	-	64	79.630	Echinops_telfairi
ENSSLDG00000022046	edc3	100	69.608	ENSEASG00005005071	EDC3	100	69.020	Equus_asinus_asinus
ENSSLDG00000022046	edc3	100	69.608	ENSECAG00000017994	EDC3	100	69.020	Equus_caballus
ENSSLDG00000022046	edc3	100	82.851	ENSELUG00000005794	edc3	100	82.645	Esox_lucius
ENSSLDG00000022046	edc3	100	73.125	ENSELUG00000007607	EDC3	100	72.500	Esox_lucius
ENSSLDG00000022046	edc3	100	69.216	ENSFCAG00000002014	EDC3	100	69.216	Felis_catus
ENSSLDG00000022046	edc3	98	69.277	ENSFALG00000004543	EDC3	99	66.414	Ficedula_albicollis
ENSSLDG00000022046	edc3	100	69.608	ENSFDAG00000012582	EDC3	100	69.608	Fukomys_damarensis
ENSSLDG00000022046	edc3	100	92.887	ENSFHEG00000009375	edc3	100	92.887	Fundulus_heteroclitus
ENSSLDG00000022046	edc3	100	88.773	ENSGMOG00000002715	edc3	100	88.773	Gadus_morhua
ENSSLDG00000022046	edc3	100	70.414	ENSGALG00000040181	EDC3	100	70.020	Gallus_gallus
ENSSLDG00000022046	edc3	100	90.795	ENSGAFG00000014433	edc3	100	90.795	Gambusia_affinis
ENSSLDG00000022046	edc3	100	92.678	ENSGACG00000009783	edc3	100	92.678	Gasterosteus_aculeatus
ENSSLDG00000022046	edc3	99	60.861	ENSGACG00000014671	EDC3	99	60.665	Gasterosteus_aculeatus
ENSSLDG00000022046	edc3	100	71.006	ENSGAGG00000023477	EDC3	100	70.392	Gopherus_agassizii
ENSSLDG00000022046	edc3	100	69.216	ENSGGOG00000003552	EDC3	100	69.216	Gorilla_gorilla
ENSSLDG00000022046	edc3	100	66.390	ENSHBUG00000020817	EDC3	100	66.390	Haplochromis_burtoni
ENSSLDG00000022046	edc3	100	92.678	ENSHBUG00000003635	edc3	100	92.678	Haplochromis_burtoni
ENSSLDG00000022046	edc3	100	90.625	ENSHCOG00000016834	edc3	100	90.625	Hippocampus_comes
ENSSLDG00000022046	edc3	99	81.325	ENSIPUG00000005695	edc3	100	80.522	Ictalurus_punctatus
ENSSLDG00000022046	edc3	100	69.745	ENSSTOG00000013936	EDC3	100	69.412	Ictidomys_tridecemlineatus
ENSSLDG00000022046	edc3	100	69.745	ENSJJAG00000008074	Edc3	100	69.216	Jaculus_jaculus
ENSSLDG00000022046	edc3	100	91.858	ENSKMAG00000001243	edc3	100	92.067	Kryptolebias_marmoratus
ENSSLDG00000022046	edc3	100	64.523	ENSKMAG00000001987	EDC3	100	64.315	Kryptolebias_marmoratus
ENSSLDG00000022046	edc3	100	64.562	ENSLBEG00000017984	EDC3	100	63.951	Labrus_bergylta
ENSSLDG00000022046	edc3	100	94.979	ENSLBEG00000013435	edc3	99	94.979	Labrus_bergylta
ENSSLDG00000022046	edc3	100	72.179	ENSLACG00000014149	EDC3	100	71.595	Latimeria_chalumnae
ENSSLDG00000022046	edc3	99	74.899	ENSLOCG00000014625	edc3	99	74.899	Lepisosteus_oculatus
ENSSLDG00000022046	edc3	100	70.079	ENSLAFG00000002992	EDC3	100	69.488	Loxodonta_africana
ENSSLDG00000022046	edc3	100	69.608	ENSMFAG00000043074	EDC3	100	69.608	Macaca_fascicularis
ENSSLDG00000022046	edc3	100	69.608	ENSMMUG00000011071	EDC3	100	69.608	Macaca_mulatta
ENSSLDG00000022046	edc3	100	69.608	ENSMNEG00000035316	EDC3	100	69.608	Macaca_nemestrina
ENSSLDG00000022046	edc3	100	69.412	ENSMLEG00000030372	EDC3	100	69.412	Mandrillus_leucophaeus
ENSSLDG00000022046	edc3	100	94.351	ENSMAMG00000000505	edc3	100	94.351	Mastacembelus_armatus
ENSSLDG00000022046	edc3	99	65.904	ENSMAMG00000005423	-	99	65.904	Mastacembelus_armatus
ENSSLDG00000022046	edc3	100	92.469	ENSMZEG00005004892	edc3	100	92.469	Maylandia_zebra
ENSSLDG00000022046	edc3	100	65.714	ENSMZEG00005005654	EDC3	100	65.714	Maylandia_zebra
ENSSLDG00000022046	edc3	100	70.217	ENSMGAG00000002617	EDC3	100	69.822	Meleagris_gallopavo
ENSSLDG00000022046	edc3	100	69.412	ENSMICG00000043190	EDC3	100	69.412	Microcebus_murinus
ENSSLDG00000022046	edc3	100	69.020	ENSMOCG00000016205	Edc3	100	69.020	Microtus_ochrogaster
ENSSLDG00000022046	edc3	99	95.388	ENSMMOG00000012278	edc3	99	95.388	Mola_mola
ENSSLDG00000022046	edc3	100	69.216	ENSMODG00000009442	EDC3	100	69.216	Monodelphis_domestica
ENSSLDG00000022046	edc3	100	94.770	ENSMALG00000008658	edc3	100	94.770	Monopterus_albus
ENSSLDG00000022046	edc3	100	68.369	MGP_CAROLIEiJ_G0032280	Edc3	100	78.462	Mus_caroli
ENSSLDG00000022046	edc3	100	68.369	ENSMUSG00000038957	Edc3	100	78.462	Mus_musculus
ENSSLDG00000022046	edc3	100	68.369	MGP_PahariEiJ_G0015146	Edc3	100	78.462	Mus_pahari
ENSSLDG00000022046	edc3	100	68.369	MGP_SPRETEiJ_G0033420	Edc3	100	78.462	Mus_spretus
ENSSLDG00000022046	edc3	100	69.216	ENSMPUG00000017293	EDC3	100	69.216	Mustela_putorius_furo
ENSSLDG00000022046	edc3	100	69.727	ENSMLUG00000016382	EDC3	100	69.727	Myotis_lucifugus
ENSSLDG00000022046	edc3	100	69.941	ENSNGAG00000010923	Edc3	100	69.020	Nannospalax_galili
ENSSLDG00000022046	edc3	100	66.460	ENSNBRG00000007881	EDC3	100	66.460	Neolamprologus_brichardi
ENSSLDG00000022046	edc3	100	92.259	ENSNBRG00000002434	edc3	100	92.259	Neolamprologus_brichardi
ENSSLDG00000022046	edc3	100	60.000	ENSNLEG00000014577	EDC3	100	60.000	Nomascus_leucogenys
ENSSLDG00000022046	edc3	100	69.034	ENSMEUG00000009077	EDC3	100	69.034	Notamacropus_eugenii
ENSSLDG00000022046	edc3	84	79.630	ENSOPRG00000009540	-	79	79.630	Ochotona_princeps
ENSSLDG00000022046	edc3	100	92.887	ENSONIG00000008434	edc3	100	92.887	Oreochromis_niloticus
ENSSLDG00000022046	edc3	100	62.209	ENSONIG00000002932	-	100	62.209	Oreochromis_niloticus
ENSSLDG00000022046	edc3	77	67.254	ENSOCUG00000017740	EDC3	86	66.834	Oryctolagus_cuniculus
ENSSLDG00000022046	edc3	100	64.108	ENSORLG00000014399	-	98	64.108	Oryzias_latipes
ENSSLDG00000022046	edc3	100	89.144	ENSORLG00000004883	edc3	100	89.144	Oryzias_latipes
ENSSLDG00000022046	edc3	100	89.353	ENSORLG00020012262	edc3	100	89.353	Oryzias_latipes_hni
ENSSLDG00000022046	edc3	100	64.108	ENSORLG00020019446	-	100	64.108	Oryzias_latipes_hni
ENSSLDG00000022046	edc3	100	89.144	ENSORLG00015005634	edc3	100	89.144	Oryzias_latipes_hsok
ENSSLDG00000022046	edc3	100	64.108	ENSORLG00015017635	-	96	64.108	Oryzias_latipes_hsok
ENSSLDG00000022046	edc3	100	89.540	ENSOMEG00000014026	edc3	100	89.540	Oryzias_melastigma
ENSSLDG00000022046	edc3	100	65.217	ENSOMEG00000017354	EDC3	100	65.217	Oryzias_melastigma
ENSSLDG00000022046	edc3	100	68.369	ENSOGAG00000014441	EDC3	100	69.216	Otolemur_garnettii
ENSSLDG00000022046	edc3	100	69.412	ENSOARG00000003476	EDC3	100	69.080	Ovis_aries
ENSSLDG00000022046	edc3	100	69.216	ENSPPAG00000040143	EDC3	100	69.216	Pan_paniscus
ENSSLDG00000022046	edc3	100	69.216	ENSPPRG00000006257	EDC3	100	69.216	Panthera_pardus
ENSSLDG00000022046	edc3	100	69.216	ENSPTIG00000017424	EDC3	100	69.216	Panthera_tigris_altaica
ENSSLDG00000022046	edc3	100	69.216	ENSPTRG00000007279	EDC3	100	69.216	Pan_troglodytes
ENSSLDG00000022046	edc3	100	69.412	ENSPANG00000015997	EDC3	100	69.412	Papio_anubis
ENSSLDG00000022046	edc3	100	75.494	ENSPKIG00000004416	edc3	100	75.296	Paramormyrops_kingsleyae
ENSSLDG00000022046	edc3	100	77.374	ENSPKIG00000019810	EDC3	100	77.419	Paramormyrops_kingsleyae
ENSSLDG00000022046	edc3	100	66.601	ENSPSIG00000008474	EDC3	100	67.059	Pelodiscus_sinensis
ENSSLDG00000022046	edc3	100	90.417	ENSPMGG00000007223	edc3	100	90.000	Periophthalmus_magnuspinnatus
ENSSLDG00000022046	edc3	100	69.412	ENSPEMG00000015260	Edc3	100	69.412	Peromyscus_maniculatus_bairdii
ENSSLDG00000022046	edc3	100	68.959	ENSPCIG00000006276	EDC3	71	68.421	Phascolarctos_cinereus
ENSSLDG00000022046	edc3	100	92.259	ENSPFOG00000012204	edc3	100	92.259	Poecilia_formosa
ENSSLDG00000022046	edc3	100	92.259	ENSPLAG00000014420	edc3	100	92.259	Poecilia_latipinna
ENSSLDG00000022046	edc3	100	92.259	ENSPMEG00000023289	edc3	100	92.259	Poecilia_mexicana
ENSSLDG00000022046	edc3	100	92.050	ENSPREG00000016022	edc3	100	92.050	Poecilia_reticulata
ENSSLDG00000022046	edc3	100	68.431	ENSPPYG00000006642	EDC3	100	68.431	Pongo_abelii
ENSSLDG00000022046	edc3	93	79.630	ENSPCAG00000002802	EDC3	88	79.630	Procavia_capensis
ENSSLDG00000022046	edc3	100	69.608	ENSPCOG00000013364	EDC3	100	69.608	Propithecus_coquereli
ENSSLDG00000022046	edc3	100	70.000	ENSPVAG00000014733	EDC3	100	69.412	Pteropus_vampyrus
ENSSLDG00000022046	edc3	100	92.678	ENSPNYG00000021797	edc3	100	92.678	Pundamilia_nyererei
ENSSLDG00000022046	edc3	100	66.390	ENSPNYG00000009669	EDC3	100	66.390	Pundamilia_nyererei
ENSSLDG00000022046	edc3	100	81.548	ENSPNAG00000019657	edc3	100	81.151	Pygocentrus_nattereri
ENSSLDG00000022046	edc3	99	68.379	ENSRNOG00000019579	Edc3	99	69.231	Rattus_norvegicus
ENSSLDG00000022046	edc3	100	69.412	ENSRBIG00000019488	EDC3	100	69.412	Rhinopithecus_bieti
ENSSLDG00000022046	edc3	100	69.412	ENSRROG00000034959	EDC3	100	69.412	Rhinopithecus_roxellana
ENSSLDG00000022046	edc3	100	69.216	ENSSBOG00000004896	EDC3	100	69.216	Saimiri_boliviensis_boliviensis
ENSSLDG00000022046	edc3	96	68.852	ENSSHAG00000015075	EDC3	95	68.238	Sarcophilus_harrisii
ENSSLDG00000022046	edc3	100	80.716	ENSSFOG00015016939	edc3	100	79.920	Scleropages_formosus
ENSSLDG00000022046	edc3	100	74.948	ENSSFOG00015002439	edc3	100	75.362	Scleropages_formosus
ENSSLDG00000022046	edc3	99	66.183	ENSSMAG00000010176	-	99	66.183	Scophthalmus_maximus
ENSSLDG00000022046	edc3	100	95.816	ENSSMAG00000010695	edc3	100	95.816	Scophthalmus_maximus
ENSSLDG00000022046	edc3	100	68.737	ENSSDUG00000007671	EDC3	100	68.737	Seriola_dumerili
ENSSLDG00000022046	edc3	100	99.791	ENSSDUG00000021844	edc3	100	99.791	Seriola_dumerili
ENSSLDG00000022046	edc3	79	79.435	ENSSARG00000003907	EDC3	80	79.435	Sorex_araneus
ENSSLDG00000022046	edc3	100	69.155	ENSSPUG00000008232	EDC3	100	68.762	Sphenodon_punctatus
ENSSLDG00000022046	edc3	100	66.046	ENSSPAG00000020327	EDC3	100	66.460	Stegastes_partitus
ENSSLDG00000022046	edc3	100	96.234	ENSSPAG00000010009	edc3	100	96.234	Stegastes_partitus
ENSSLDG00000022046	edc3	100	71.757	ENSSSCG00000001903	EDC3	100	71.757	Sus_scrofa
ENSSLDG00000022046	edc3	100	71.006	ENSTGUG00000004007	EDC3	100	70.217	Taeniopygia_guttata
ENSSLDG00000022046	edc3	100	92.050	ENSTRUG00000017078	edc3	100	91.841	Takifugu_rubripes
ENSSLDG00000022046	edc3	100	92.083	ENSTNIG00000016047	edc3	100	92.083	Tetraodon_nigroviridis
ENSSLDG00000022046	edc3	100	69.745	ENSTTRG00000007990	EDC3	100	69.745	Tursiops_truncatus
ENSSLDG00000022046	edc3	100	69.608	ENSUAMG00000026710	-	100	69.020	Ursus_americanus
ENSSLDG00000022046	edc3	100	69.608	ENSUMAG00000005006	EDC3	98	67.557	Ursus_maritimus
ENSSLDG00000022046	edc3	84	70.370	ENSVPAG00000003499	-	79	70.370	Vicugna_pacos
ENSSLDG00000022046	edc3	100	69.412	ENSVVUG00000018601	EDC3	100	68.824	Vulpes_vulpes
ENSSLDG00000022046	edc3	72	75.645	ENSXETG00000010622	edc3	99	77.077	Xenopus_tropicalis
ENSSLDG00000022046	edc3	100	92.050	ENSXMAG00000007377	edc3	100	92.050	Xiphophorus_maculatus