EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000022076 (Gene tree)
Gene ID: -
Gene Symbol: rcl1
Alias: zgc:109921
Full Name: RNA terminal phosphate cyclase like 1
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 13883 bases
Position: chrPEQF01098612.1:24589-38471
Accession: 111652984
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000028554	RTC	PF01137.21	3.6e-57	1	1
ENSSLDP00000028569	RTC	PF01137.21	1.8e-47	1	1
ENSSLDP00000028569	RTC_insert	PF05189.13	1.1e-35	1	1
ENSSLDP00000028554	RTC_insert	PF05189.13	1.2e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000029398	-	5547	XM_023403410	ENSSLDP00000028554	372 (aa)	XP_023259178	UPI000C6F5432
ENSSLDT00000029414	-	1083	-	ENSSLDP00000028569	360 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000022076's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000022076's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000022076	rcl1	100	78.342	ENSG00000120158	RCL1	100	81.481	Homo_sapiens
ENSSLDG00000022076	rcl1	100	92.742	ENSAPOG00000015666	rcl1	100	92.742	Acanthochromis_polyacanthus
ENSSLDG00000022076	rcl1	100	79.412	ENSAMEG00000002631	RCL1	100	79.412	Ailuropoda_melanoleuca
ENSSLDG00000022076	rcl1	100	91.398	ENSACIG00000021195	rcl1	100	91.398	Amphilophus_citrinellus
ENSSLDG00000022076	rcl1	100	91.935	ENSAOCG00000002223	rcl1	100	91.935	Amphiprion_ocellaris
ENSSLDG00000022076	rcl1	100	92.473	ENSAPEG00000006905	rcl1	100	92.473	Amphiprion_percula
ENSSLDG00000022076	rcl1	100	90.860	ENSATEG00000020026	rcl1	100	90.860	Anabas_testudineus
ENSSLDG00000022076	rcl1	88	75.988	ENSAPLG00000006031	RCL1	100	75.988	Anas_platyrhynchos
ENSSLDG00000022076	rcl1	100	73.529	ENSACAG00000003640	RCL1	100	73.529	Anolis_carolinensis
ENSSLDG00000022076	rcl1	100	78.075	ENSANAG00000037372	RCL1	100	78.075	Aotus_nancymaae
ENSSLDG00000022076	rcl1	100	91.129	ENSACLG00000021724	rcl1	100	91.129	Astatotilapia_calliptera
ENSSLDG00000022076	rcl1	99	82.337	ENSAMXG00000033394	rcl1	99	82.337	Astyanax_mexicanus
ENSSLDG00000022076	rcl1	99	45.767	WBGene00022852	ZK1127.5	99	45.767	Caenorhabditis_elegans
ENSSLDG00000022076	rcl1	100	78.075	ENSCJAG00000011202	RCL1	100	78.075	Callithrix_jacchus
ENSSLDG00000022076	rcl1	100	79.412	ENSCAFG00000002091	RCL1	100	79.412	Canis_familiaris
ENSSLDG00000022076	rcl1	100	79.679	ENSCAFG00020000638	RCL1	78	79.679	Canis_lupus_dingo
ENSSLDG00000022076	rcl1	100	78.075	ENSCHIG00000012407	RCL1	100	78.075	Capra_hircus
ENSSLDG00000022076	rcl1	88	81.098	ENSTSYG00000009592	RCL1	97	82.418	Carlito_syrichta
ENSSLDG00000022076	rcl1	70	65.537	ENSCAPG00000013575	RCL1	100	65.537	Cavia_aperea
ENSSLDG00000022076	rcl1	100	78.342	ENSCPOG00000015354	RCL1	100	78.342	Cavia_porcellus
ENSSLDG00000022076	rcl1	100	78.075	ENSCCAG00000033505	RCL1	100	78.075	Cebus_capucinus
ENSSLDG00000022076	rcl1	100	78.075	ENSCATG00000034721	RCL1	97	81.319	Cercocebus_atys
ENSSLDG00000022076	rcl1	100	78.342	ENSCLAG00000007445	RCL1	100	78.342	Chinchilla_lanigera
ENSSLDG00000022076	rcl1	100	78.342	ENSCSAG00000008811	RCL1	100	78.342	Chlorocebus_sabaeus
ENSSLDG00000022076	rcl1	86	68.731	ENSCHOG00000007216	RCL1	100	68.731	Choloepus_hoffmanni
ENSSLDG00000022076	rcl1	100	76.471	ENSCPBG00000025481	RCL1	94	77.576	Chrysemys_picta_bellii
ENSSLDG00000022076	rcl1	100	58.400	ENSCING00000019565	-	99	58.400	Ciona_intestinalis
ENSSLDG00000022076	rcl1	100	78.342	ENSCANG00000027099	RCL1	100	78.342	Colobus_angolensis_palliatus
ENSSLDG00000022076	rcl1	100	78.610	ENSCGRG00001013748	Rcl1	100	78.610	Cricetulus_griseus_chok1gshd
ENSSLDG00000022076	rcl1	88	80.547	ENSCGRG00000005843	Rcl1	99	80.547	Cricetulus_griseus_crigri
ENSSLDG00000022076	rcl1	100	88.978	ENSCSEG00000000712	rcl1	98	88.978	Cynoglossus_semilaevis
ENSSLDG00000022076	rcl1	100	91.398	ENSCVAG00000011536	rcl1	100	91.398	Cyprinodon_variegatus
ENSSLDG00000022076	rcl1	99	79.292	ENSDARG00000038312	rcl1	100	79.292	Danio_rerio
ENSSLDG00000022076	rcl1	74	80.451	ENSDNOG00000019911	RCL1	100	81.944	Dasypus_novemcinctus
ENSSLDG00000022076	rcl1	99	78.919	ENSDORG00000015645	Rcl1	99	78.919	Dipodomys_ordii
ENSSLDG00000022076	rcl1	98	53.369	FBgn0020909	Rtc1	98	53.704	Drosophila_melanogaster
ENSSLDG00000022076	rcl1	88	55.183	ENSETEG00000014087	-	100	55.183	Echinops_telfairi
ENSSLDG00000022076	rcl1	100	54.960	ENSEBUG00000016621	-	99	54.960	Eptatretus_burgeri
ENSSLDG00000022076	rcl1	100	77.540	ENSEASG00005010653	RCL1	100	77.540	Equus_asinus_asinus
ENSSLDG00000022076	rcl1	100	77.540	ENSECAG00000015973	RCL1	100	77.540	Equus_caballus
ENSSLDG00000022076	rcl1	99	66.486	ENSEEUG00000009801	RCL1	99	66.486	Erinaceus_europaeus
ENSSLDG00000022076	rcl1	100	81.183	ENSELUG00000007353	rcl1	100	81.183	Esox_lucius
ENSSLDG00000022076	rcl1	99	78.378	ENSFCAG00000014557	RCL1	99	78.378	Felis_catus
ENSSLDG00000022076	rcl1	99	69.730	ENSFALG00000010553	RCL1	96	69.730	Ficedula_albicollis
ENSSLDG00000022076	rcl1	88	78.963	ENSFDAG00000004209	RCL1	100	78.963	Fukomys_damarensis
ENSSLDG00000022076	rcl1	100	90.591	ENSFHEG00000011228	rcl1	100	90.591	Fundulus_heteroclitus
ENSSLDG00000022076	rcl1	99	82.656	ENSGMOG00000004677	rcl1	99	82.656	Gadus_morhua
ENSSLDG00000022076	rcl1	99	74.324	ENSGALG00000015024	RCL1	99	74.324	Gallus_gallus
ENSSLDG00000022076	rcl1	100	90.860	ENSGAFG00000007257	rcl1	100	90.860	Gambusia_affinis
ENSSLDG00000022076	rcl1	100	90.323	ENSGACG00000017474	rcl1	100	90.323	Gasterosteus_aculeatus
ENSSLDG00000022076	rcl1	100	76.203	ENSGAGG00000003689	RCL1	100	76.203	Gopherus_agassizii
ENSSLDG00000022076	rcl1	100	78.075	ENSGGOG00000015041	RCL1	100	78.075	Gorilla_gorilla
ENSSLDG00000022076	rcl1	100	91.667	ENSHBUG00000001393	rcl1	100	91.667	Haplochromis_burtoni
ENSSLDG00000022076	rcl1	100	78.877	ENSHGLG00000016452	RCL1	100	78.877	Heterocephalus_glaber_female
ENSSLDG00000022076	rcl1	100	66.043	ENSHGLG00000005368	-	100	66.043	Heterocephalus_glaber_female
ENSSLDG00000022076	rcl1	100	74.332	ENSHGLG00100008718	-	100	74.332	Heterocephalus_glaber_male
ENSSLDG00000022076	rcl1	100	66.845	ENSHGLG00100018010	-	100	66.845	Heterocephalus_glaber_male
ENSSLDG00000022076	rcl1	100	90.591	ENSHCOG00000020170	rcl1	100	90.591	Hippocampus_comes
ENSSLDG00000022076	rcl1	100	83.333	ENSIPUG00000018054	RCL1	100	83.333	Ictalurus_punctatus
ENSSLDG00000022076	rcl1	100	77.540	ENSSTOG00000000023	RCL1	100	77.540	Ictidomys_tridecemlineatus
ENSSLDG00000022076	rcl1	56	62.376	ENSJJAG00000000764	-	98	62.376	Jaculus_jaculus
ENSSLDG00000022076	rcl1	99	79.189	ENSJJAG00000022803	-	99	79.189	Jaculus_jaculus
ENSSLDG00000022076	rcl1	99	68.919	ENSJJAG00000015632	-	99	68.919	Jaculus_jaculus
ENSSLDG00000022076	rcl1	100	91.935	ENSKMAG00000011946	rcl1	100	91.935	Kryptolebias_marmoratus
ENSSLDG00000022076	rcl1	100	87.366	ENSLBEG00000003957	rcl1	100	87.366	Labrus_bergylta
ENSSLDG00000022076	rcl1	93	75.434	ENSLACG00000004594	RCL1	100	79.814	Latimeria_chalumnae
ENSSLDG00000022076	rcl1	100	82.796	ENSLOCG00000010148	rcl1	98	82.796	Lepisosteus_oculatus
ENSSLDG00000022076	rcl1	99	77.027	ENSLAFG00000017495	RCL1	99	77.027	Loxodonta_africana
ENSSLDG00000022076	rcl1	100	78.342	ENSMFAG00000037906	RCL1	100	78.342	Macaca_fascicularis
ENSSLDG00000022076	rcl1	100	78.342	ENSMNEG00000012288	RCL1	100	78.342	Macaca_nemestrina
ENSSLDG00000022076	rcl1	100	78.342	ENSMLEG00000043088	RCL1	100	78.342	Mandrillus_leucophaeus
ENSSLDG00000022076	rcl1	100	92.742	ENSMAMG00000008311	rcl1	100	92.742	Mastacembelus_armatus
ENSSLDG00000022076	rcl1	100	91.129	ENSMZEG00005017292	rcl1	100	91.129	Maylandia_zebra
ENSSLDG00000022076	rcl1	60	73.636	ENSMGAG00000002245	RCL1	100	73.636	Meleagris_gallopavo
ENSSLDG00000022076	rcl1	60	81.481	ENSMAUG00000008922	Rcl1	100	81.481	Mesocricetus_auratus
ENSSLDG00000022076	rcl1	100	78.610	ENSMICG00000015562	RCL1	100	78.610	Microcebus_murinus
ENSSLDG00000022076	rcl1	100	78.342	ENSMOCG00000012145	Rcl1	100	78.342	Microtus_ochrogaster
ENSSLDG00000022076	rcl1	100	87.399	ENSMMOG00000021264	rcl1	100	87.399	Mola_mola
ENSSLDG00000022076	rcl1	95	77.247	ENSMODG00000015377	RCL1	94	77.247	Monodelphis_domestica
ENSSLDG00000022076	rcl1	100	92.473	ENSMALG00000018618	rcl1	100	92.473	Monopterus_albus
ENSSLDG00000022076	rcl1	100	78.342	MGP_CAROLIEiJ_G0022853	Rcl1	100	78.342	Mus_caroli
ENSSLDG00000022076	rcl1	100	77.807	ENSMUSG00000024785	Rcl1	100	77.807	Mus_musculus
ENSSLDG00000022076	rcl1	100	78.610	MGP_PahariEiJ_G0014346	Rcl1	100	80.702	Mus_pahari
ENSSLDG00000022076	rcl1	100	77.807	MGP_SPRETEiJ_G0023771	Rcl1	100	80.117	Mus_spretus
ENSSLDG00000022076	rcl1	100	79.144	ENSMPUG00000004998	RCL1	100	79.144	Mustela_putorius_furo
ENSSLDG00000022076	rcl1	100	77.005	ENSMLUG00000009654	RCL1	100	77.005	Myotis_lucifugus
ENSSLDG00000022076	rcl1	100	78.342	ENSNGAG00000015327	Rcl1	100	78.342	Nannospalax_galili
ENSSLDG00000022076	rcl1	92	88.630	ENSNBRG00000019854	rcl1	99	84.848	Neolamprologus_brichardi
ENSSLDG00000022076	rcl1	100	75.668	ENSNLEG00000008891	RCL1	100	75.668	Nomascus_leucogenys
ENSSLDG00000022076	rcl1	100	71.123	ENSMEUG00000007653	RCL1	100	71.123	Notamacropus_eugenii
ENSSLDG00000022076	rcl1	100	76.471	ENSOPRG00000010965	RCL1	100	76.471	Ochotona_princeps
ENSSLDG00000022076	rcl1	88	66.565	ENSODEG00000004151	RCL1	96	66.565	Octodon_degus
ENSSLDG00000022076	rcl1	100	91.667	ENSONIG00000003871	rcl1	100	91.667	Oreochromis_niloticus
ENSSLDG00000022076	rcl1	69	76.285	ENSOANG00000013193	-	99	76.285	Ornithorhynchus_anatinus
ENSSLDG00000022076	rcl1	100	77.807	ENSOCUG00000008161	RCL1	100	77.807	Oryctolagus_cuniculus
ENSSLDG00000022076	rcl1	100	87.634	ENSORLG00000010443	rcl1	100	87.634	Oryzias_latipes
ENSSLDG00000022076	rcl1	100	87.903	ENSORLG00020012211	rcl1	100	87.903	Oryzias_latipes_hni
ENSSLDG00000022076	rcl1	100	87.366	ENSORLG00015001122	rcl1	100	87.366	Oryzias_latipes_hsok
ENSSLDG00000022076	rcl1	100	90.323	ENSOMEG00000022976	rcl1	88	90.323	Oryzias_melastigma
ENSSLDG00000022076	rcl1	99	78.378	ENSOGAG00000007480	RCL1	99	78.378	Otolemur_garnettii
ENSSLDG00000022076	rcl1	100	78.075	ENSOARG00000013463	RCL1	100	78.075	Ovis_aries
ENSSLDG00000022076	rcl1	100	78.075	ENSPPAG00000037958	RCL1	100	78.075	Pan_paniscus
ENSSLDG00000022076	rcl1	99	77.838	ENSPPRG00000022645	RCL1	96	81.006	Panthera_pardus
ENSSLDG00000022076	rcl1	88	79.817	ENSPTIG00000019031	RCL1	100	80.556	Panthera_tigris_altaica
ENSSLDG00000022076	rcl1	100	77.807	ENSPTRG00000020743	RCL1	97	81.319	Pan_troglodytes
ENSSLDG00000022076	rcl1	100	78.342	ENSPANG00000025151	RCL1	100	78.342	Papio_anubis
ENSSLDG00000022076	rcl1	100	81.452	ENSPKIG00000021022	rcl1	100	81.452	Paramormyrops_kingsleyae
ENSSLDG00000022076	rcl1	88	77.812	ENSPSIG00000012302	RCL1	100	77.812	Pelodiscus_sinensis
ENSSLDG00000022076	rcl1	100	88.441	ENSPMGG00000024007	rcl1	100	88.441	Periophthalmus_magnuspinnatus
ENSSLDG00000022076	rcl1	100	78.610	ENSPEMG00000023275	Rcl1	100	78.610	Peromyscus_maniculatus_bairdii
ENSSLDG00000022076	rcl1	100	77.273	ENSPCIG00000000188	RCL1	100	77.273	Phascolarctos_cinereus
ENSSLDG00000022076	rcl1	100	90.860	ENSPFOG00000019682	rcl1	99	90.860	Poecilia_formosa
ENSSLDG00000022076	rcl1	100	90.860	ENSPLAG00000022354	rcl1	100	90.860	Poecilia_latipinna
ENSSLDG00000022076	rcl1	100	90.860	ENSPMEG00000008131	rcl1	100	90.860	Poecilia_mexicana
ENSSLDG00000022076	rcl1	100	90.323	ENSPREG00000008032	rcl1	100	90.323	Poecilia_reticulata
ENSSLDG00000022076	rcl1	100	78.610	ENSPPYG00000019244	RCL1	100	78.610	Pongo_abelii
ENSSLDG00000022076	rcl1	99	72.973	ENSPCAG00000001440	RCL1	99	72.973	Procavia_capensis
ENSSLDG00000022076	rcl1	100	78.877	ENSPCOG00000009611	RCL1	100	78.877	Propithecus_coquereli
ENSSLDG00000022076	rcl1	100	77.807	ENSPVAG00000015752	RCL1	100	77.807	Pteropus_vampyrus
ENSSLDG00000022076	rcl1	100	91.129	ENSPNYG00000012910	rcl1	100	91.129	Pundamilia_nyererei
ENSSLDG00000022076	rcl1	99	82.880	ENSPNAG00000028307	rcl1	91	82.880	Pygocentrus_nattereri
ENSSLDG00000022076	rcl1	100	77.807	ENSRNOG00000015491	Rcl1	100	77.807	Rattus_norvegicus
ENSSLDG00000022076	rcl1	100	78.075	ENSRBIG00000035818	RCL1	100	78.075	Rhinopithecus_bieti
ENSSLDG00000022076	rcl1	100	78.342	ENSRROG00000029781	RCL1	100	78.342	Rhinopithecus_roxellana
ENSSLDG00000022076	rcl1	99	37.701	YOL010W	-	99	37.701	Saccharomyces_cerevisiae
ENSSLDG00000022076	rcl1	100	78.342	ENSSBOG00000026369	RCL1	97	81.421	Saimiri_boliviensis_boliviensis
ENSSLDG00000022076	rcl1	89	77.946	ENSSHAG00000014086	RCL1	100	77.946	Sarcophilus_harrisii
ENSSLDG00000022076	rcl1	100	82.527	ENSSFOG00015023020	rcl1	100	82.527	Scleropages_formosus
ENSSLDG00000022076	rcl1	100	94.086	ENSSMAG00000019751	rcl1	86	94.086	Scophthalmus_maximus
ENSSLDG00000022076	rcl1	100	99.194	ENSSDUG00000006349	rcl1	100	99.194	Seriola_dumerili
ENSSLDG00000022076	rcl1	100	77.807	ENSSARG00000009260	RCL1	100	77.807	Sorex_araneus
ENSSLDG00000022076	rcl1	99	76.757	ENSSPUG00000016330	RCL1	99	76.757	Sphenodon_punctatus
ENSSLDG00000022076	rcl1	100	93.011	ENSSPAG00000018038	rcl1	100	93.011	Stegastes_partitus
ENSSLDG00000022076	rcl1	100	78.342	ENSSSCG00000005217	RCL1	83	78.342	Sus_scrofa
ENSSLDG00000022076	rcl1	99	74.462	ENSTGUG00000005138	RCL1	99	74.462	Taeniopygia_guttata
ENSSLDG00000022076	rcl1	100	87.366	ENSTRUG00000010493	rcl1	100	87.366	Takifugu_rubripes
ENSSLDG00000022076	rcl1	100	85.484	ENSTNIG00000013214	rcl1	99	85.484	Tetraodon_nigroviridis
ENSSLDG00000022076	rcl1	100	73.262	ENSTBEG00000016339	RCL1	100	73.262	Tupaia_belangeri
ENSSLDG00000022076	rcl1	100	78.342	ENSTTRG00000016525	RCL1	100	78.342	Tursiops_truncatus
ENSSLDG00000022076	rcl1	100	79.412	ENSUAMG00000005598	RCL1	100	80.556	Ursus_americanus
ENSSLDG00000022076	rcl1	88	80.793	ENSUMAG00000017890	RCL1	97	80.793	Ursus_maritimus
ENSSLDG00000022076	rcl1	88	80.183	ENSVPAG00000009188	RCL1	100	80.183	Vicugna_pacos
ENSSLDG00000022076	rcl1	88	81.763	ENSVVUG00000007304	RCL1	89	81.763	Vulpes_vulpes
ENSSLDG00000022076	rcl1	100	72.267	ENSXETG00000000592	rcl1	100	72.267	Xenopus_tropicalis
ENSSLDG00000022076	rcl1	100	91.129	ENSXCOG00000004922	rcl1	100	91.129	Xiphophorus_couchianus
ENSSLDG00000022076	rcl1	56	30.698	ENSXCOG00000008002	rtca	62	30.698	Xiphophorus_couchianus
ENSSLDG00000022076	rcl1	100	91.129	ENSXMAG00000022366	RCL1	100	91.129	Xiphophorus_maculatus