EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSSLDG00000022111 (Gene tree)
Gene ID
-
Gene Symbol
rpf2
Alias
bxdc1|ik:tdsubc_1a3|wu:fe17d08|wu:fj16d06|xx:tdsubc_1a3|zgc:77150
Full Name
ribosome production factor 2 homolog
Gene Type
protein_coding
Species
Seriola_lalandi_dorsalis
Status
putative
Strand
Plus strand
Length
8813 bases
Position
chrPEQF01099424.1:1317185-1325997
Accession
111645187
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSLDP00000028618BrixPF04427.189.3e-4711
ENSSLDP00000028635BrixPF04427.181.1e-3711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSLDT00000029464-4473XM_023394279ENSSLDP00000028618308 (aa)XP_023250047UPI000C6FCAA2
ENSSLDT00000029481-864-ENSSLDP00000028635287 (aa)--
Gene Model
Click here to download ENSSLDG00000022111's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000022111's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSLDG00000022111rpf29973.443ENSG00000197498RPF29877.143Homo_sapiens
ENSSLDG00000022111rpf29992.834ENSAPOG00000005714rpf29992.834Acanthochromis_polyacanthus
ENSSLDG00000022111rpf29972.459ENSAMEG00000015753RPF29972.459Ailuropoda_melanoleuca
ENSSLDG00000022111rpf25889.820ENSACIG00000006659rpf210089.820Amphilophus_citrinellus
ENSSLDG00000022111rpf210092.857ENSAOCG00000005173rpf210092.857Amphiprion_ocellaris
ENSSLDG00000022111rpf210092.857ENSAPEG00000004003rpf210092.857Amphiprion_percula
ENSSLDG00000022111rpf210090.260ENSATEG00000012818rpf210090.260Anabas_testudineus
ENSSLDG00000022111rpf28975.458ENSAPLG00000008812RPF210075.458Anas_platyrhynchos
ENSSLDG00000022111rpf210074.434ENSACAG00000011270RPF210074.434Anolis_carolinensis
ENSSLDG00000022111rpf29970.492ENSANAG00000026549-9970.492Aotus_nancymaae
ENSSLDG00000022111rpf29954.934ENSANAG00000021067-9953.947Aotus_nancymaae
ENSSLDG00000022111rpf29261.798ENSANAG00000025459-9260.300Aotus_nancymaae
ENSSLDG00000022111rpf29968.197ENSANAG00000034834-9968.197Aotus_nancymaae
ENSSLDG00000022111rpf29857.426ENSANAG00000033736-9958.086Aotus_nancymaae
ENSSLDG00000022111rpf210079.545ENSAMXG00000035201rpf29979.545Astyanax_mexicanus
ENSSLDG00000022111rpf29973.770ENSBTAG00000016584RPF29973.770Bos_taurus
ENSSLDG00000022111rpf29146.619WBGene00021830Y54E10A.109546.619Caenorhabditis_elegans
ENSSLDG00000022111rpf29973.770ENSCJAG00000038330RPF29976.250Callithrix_jacchus
ENSSLDG00000022111rpf29972.131ENSCAFG00000003918RPF29972.131Canis_familiaris
ENSSLDG00000022111rpf29970.492ENSCHIG00000022499RPF29970.492Capra_hircus
ENSSLDG00000022111rpf29974.426ENSTSYG00000013924RPF29974.426Carlito_syrichta
ENSSLDG00000022111rpf29661.372ENSCAPG00000014257RPF29661.011Cavia_aperea
ENSSLDG00000022111rpf29873.267ENSCPOG00000006797RPF210074.046Cavia_porcellus
ENSSLDG00000022111rpf29954.545ENSCCAG00000028553-9953.896Cebus_capucinus
ENSSLDG00000022111rpf29973.770ENSCCAG00000030864-9973.770Cebus_capucinus
ENSSLDG00000022111rpf29972.131ENSCCAG00000030365-9972.131Cebus_capucinus
ENSSLDG00000022111rpf28565.019ENSCCAG00000028906-9764.224Cebus_capucinus
ENSSLDG00000022111rpf28365.504ENSCATG00000034352-9958.170Cercocebus_atys
ENSSLDG00000022111rpf28760.517ENSCATG00000029725-9874.419Cercocebus_atys
ENSSLDG00000022111rpf28654.924ENSCLAG00000013252-9654.924Chinchilla_lanigera
ENSSLDG00000022111rpf29658.333ENSCLAG00000010874-9958.000Chinchilla_lanigera
ENSSLDG00000022111rpf29872.937ENSCLAG00000010393-10073.664Chinchilla_lanigera
ENSSLDG00000022111rpf29968.078ENSCHOG00000005865RPF210068.078Choloepus_hoffmanni
ENSSLDG00000022111rpf29875.166ENSCPBG00000006504RPF29875.166Chrysemys_picta_bellii
ENSSLDG00000022111rpf29160.854ENSCING00000008090-9758.194Ciona_intestinalis
ENSSLDG00000022111rpf29259.507ENSCSAVG00000010672-9659.507Ciona_savignyi
ENSSLDG00000022111rpf29974.426ENSCANG00000030665RPF29974.426Colobus_angolensis_palliatus
ENSSLDG00000022111rpf29973.115ENSCGRG00001007331-9973.115Cricetulus_griseus_chok1gshd
ENSSLDG00000022111rpf29660.473ENSCGRG00001005262-9560.473Cricetulus_griseus_chok1gshd
ENSSLDG00000022111rpf29674.074ENSCGRG00000006083Rpf210074.046Cricetulus_griseus_crigri
ENSSLDG00000022111rpf29982.623ENSCSEG00000015725rpf210082.623Cynoglossus_semilaevis
ENSSLDG00000022111rpf210087.338ENSCVAG00000001072rpf210087.338Cyprinodon_variegatus
ENSSLDG00000022111rpf210075.974ENSDARG00000043960rpf210075.974Danio_rerio
ENSSLDG00000022111rpf27171.078ENSDNOG00000039270RPF29971.078Dasypus_novemcinctus
ENSSLDG00000022111rpf26077.419ENSDORG00000026915Rpf29978.261Dipodomys_ordii
ENSSLDG00000022111rpf29150.178FBgn0038585Non39348.829Drosophila_melanogaster
ENSSLDG00000022111rpf29955.882ENSEBUG00000003640rpf29355.882Eptatretus_burgeri
ENSSLDG00000022111rpf25369.536ENSEASG00005002363-9769.536Equus_asinus_asinus
ENSSLDG00000022111rpf29672.727ENSEASG00005006927-9971.475Equus_asinus_asinus
ENSSLDG00000022111rpf29675.758ENSECAG00000017121RPF29974.426Equus_caballus
ENSSLDG00000022111rpf29657.627ENSEEUG00000006169RPF29957.627Erinaceus_europaeus
ENSSLDG00000022111rpf29884.718ENSELUG00000018518rpf29984.718Esox_lucius
ENSSLDG00000022111rpf29972.787ENSFCAG00000001527RPF29972.787Felis_catus
ENSSLDG00000022111rpf29973.770ENSFALG00000010816RPF29973.770Ficedula_albicollis
ENSSLDG00000022111rpf28762.151ENSFDAG00000016721-10062.151Fukomys_damarensis
ENSSLDG00000022111rpf29973.115ENSFDAG00000005811-10074.427Fukomys_damarensis
ENSSLDG00000022111rpf210087.662ENSFHEG00000011243rpf210087.662Fundulus_heteroclitus
ENSSLDG00000022111rpf29572.603ENSGMOG00000002521rpf29872.603Gadus_morhua
ENSSLDG00000022111rpf29876.080ENSGALG00000037087RPF29676.610Gallus_gallus
ENSSLDG00000022111rpf210087.338ENSGAFG00000009537rpf210087.338Gambusia_affinis
ENSSLDG00000022111rpf29985.342ENSGACG00000006507rpf29985.342Gasterosteus_aculeatus
ENSSLDG00000022111rpf29871.192ENSGAGG00000016221RPF29871.192Gopherus_agassizii
ENSSLDG00000022111rpf29270.318ENSGGOG00000024187-9970.318Gorilla_gorilla
ENSSLDG00000022111rpf29960.000ENSGGOG00000001469RPF29960.000Gorilla_gorilla
ENSSLDG00000022111rpf210090.584ENSHBUG00000021805rpf210090.584Haplochromis_burtoni
ENSSLDG00000022111rpf29567.918ENSHGLG00000012500-7768.942Heterocephalus_glaber_female
ENSSLDG00000022111rpf29269.858ENSHGLG00000012697-9869.858Heterocephalus_glaber_female
ENSSLDG00000022111rpf29972.787ENSHGLG00000001322RPF210074.046Heterocephalus_glaber_female
ENSSLDG00000022111rpf29265.660ENSHGLG00100002981-10065.660Heterocephalus_glaber_male
ENSSLDG00000022111rpf29269.858ENSHGLG00100000462-9869.858Heterocephalus_glaber_male
ENSSLDG00000022111rpf29567.577ENSHGLG00100012473-9468.601Heterocephalus_glaber_male
ENSSLDG00000022111rpf29972.787ENSHGLG00100012131RPF210074.046Heterocephalus_glaber_male
ENSSLDG00000022111rpf28861.481ENSHGLG00100009310-9960.741Heterocephalus_glaber_male
ENSSLDG00000022111rpf210087.662ENSHCOG00000000225rpf210087.662Hippocampus_comes
ENSSLDG00000022111rpf29969.608ENSIPUG00000016288rpf29969.677Ictalurus_punctatus
ENSSLDG00000022111rpf29957.377ENSSTOG00000013114RPF210057.358Ictidomys_tridecemlineatus
ENSSLDG00000022111rpf29770.714ENSJJAG00000009092Rpf29975.591Jaculus_jaculus
ENSSLDG00000022111rpf29988.925ENSKMAG00000014609rpf29988.925Kryptolebias_marmoratus
ENSSLDG00000022111rpf29987.948ENSLBEG00000011907rpf29985.664Labrus_bergylta
ENSSLDG00000022111rpf29974.110ENSLACG00000003942RPF210074.110Latimeria_chalumnae
ENSSLDG00000022111rpf29485.274ENSLOCG00000016992rpf29585.274Lepisosteus_oculatus
ENSSLDG00000022111rpf29975.082ENSLAFG00000018219RPF29975.082Loxodonta_africana
ENSSLDG00000022111rpf29974.426ENSMFAG00000000417RPF29974.426Macaca_fascicularis
ENSSLDG00000022111rpf28758.456ENSMFAG00000036119-9958.456Macaca_fascicularis
ENSSLDG00000022111rpf29974.426ENSMMUG00000021532RPF29877.619Macaca_mulatta
ENSSLDG00000022111rpf29856.494ENSMMUG00000042376-10056.494Macaca_mulatta
ENSSLDG00000022111rpf29961.311ENSMNEG00000031683RPF29961.311Macaca_nemestrina
ENSSLDG00000022111rpf29858.746ENSMLEG00000042472-10058.746Mandrillus_leucophaeus
ENSSLDG00000022111rpf210088.312ENSMAMG00000004267rpf210088.312Mastacembelus_armatus
ENSSLDG00000022111rpf210090.584ENSMZEG00005015632rpf210090.584Maylandia_zebra
ENSSLDG00000022111rpf29875.415ENSMGAG00000013429RPF29675.932Meleagris_gallopavo
ENSSLDG00000022111rpf28055.022ENSMAUG00000005049Rpf29955.263Mesocricetus_auratus
ENSSLDG00000022111rpf29861.716ENSMICG00000028979-9961.716Microcebus_murinus
ENSSLDG00000022111rpf29665.993ENSMICG00000038169-9964.590Microcebus_murinus
ENSSLDG00000022111rpf29973.443ENSMICG00000032086-9973.443Microcebus_murinus
ENSSLDG00000022111rpf29772.333ENSMOCG00000005634Rpf210073.282Microtus_ochrogaster
ENSSLDG00000022111rpf29781.605ENSMMOG00000014844rpf29981.605Mola_mola
ENSSLDG00000022111rpf29672.727ENSMODG00000017919RPF29872.727Monodelphis_domestica
ENSSLDG00000022111rpf29988.599ENSMALG00000019046rpf29988.599Monopterus_albus
ENSSLDG00000022111rpf29973.443MGP_CAROLIEiJ_G0015254Rpf210078.218Mus_caroli
ENSSLDG00000022111rpf29972.787ENSMUSG00000038510Rpf210077.228Mus_musculus
ENSSLDG00000022111rpf29972.131MGP_PahariEiJ_G0030671Rpf210075.472Mus_pahari
ENSSLDG00000022111rpf29972.459MGP_SPRETEiJ_G0016063Rpf210077.228Mus_spretus
ENSSLDG00000022111rpf29973.115ENSMPUG00000010183RPF28773.115Mustela_putorius_furo
ENSSLDG00000022111rpf28277.075ENSMLUG00000005676RPF29977.075Myotis_lucifugus
ENSSLDG00000022111rpf29872.277ENSNGAG00000009701Rpf210072.901Nannospalax_galili
ENSSLDG00000022111rpf210090.260ENSNBRG00000011087rpf210090.260Neolamprologus_brichardi
ENSSLDG00000022111rpf27774.153ENSNLEG00000011848-9673.707Nomascus_leucogenys
ENSSLDG00000022111rpf29973.115ENSNLEG00000027819RPF29973.115Nomascus_leucogenys
ENSSLDG00000022111rpf29367.719ENSNLEG00000033597-8572.308Nomascus_leucogenys
ENSSLDG00000022111rpf29656.902ENSMEUG00000006421RPF29956.902Notamacropus_eugenii
ENSSLDG00000022111rpf29868.647ENSODEG00000019144-9968.647Octodon_degus
ENSSLDG00000022111rpf28961.455ENSODEG00000002442-9461.455Octodon_degus
ENSSLDG00000022111rpf29865.017ENSODEG00000006584-9965.017Octodon_degus
ENSSLDG00000022111rpf29673.559ENSODEG00000013529-10074.046Octodon_degus
ENSSLDG00000022111rpf28961.455ENSODEG00000003531-10061.455Octodon_degus
ENSSLDG00000022111rpf28663.258ENSODEG00000006939-9663.710Octodon_degus
ENSSLDG00000022111rpf210090.909ENSONIG00000011383rpf210090.909Oreochromis_niloticus
ENSSLDG00000022111rpf29973.770ENSOCUG00000016028RPF29973.770Oryctolagus_cuniculus
ENSSLDG00000022111rpf210085.065ENSORLG00000015183rpf210085.065Oryzias_latipes
ENSSLDG00000022111rpf210084.740ENSORLG00020008756rpf29781.667Oryzias_latipes_hni
ENSSLDG00000022111rpf210085.065ENSORLG00015003841RPF210085.065Oryzias_latipes_hsok
ENSSLDG00000022111rpf210086.688ENSOMEG00000011508rpf210086.688Oryzias_melastigma
ENSSLDG00000022111rpf29972.787ENSOGAG00000007438RPF29972.787Otolemur_garnettii
ENSSLDG00000022111rpf29973.770ENSOARG00000009886-9973.770Ovis_aries
ENSSLDG00000022111rpf29973.770ENSOARG00000015548-9973.770Ovis_aries
ENSSLDG00000022111rpf29973.443ENSPPAG00000035622RPF29973.443Pan_paniscus
ENSSLDG00000022111rpf29070.652ENSPPAG00000032089-9970.652Pan_paniscus
ENSSLDG00000022111rpf29263.732ENSPPRG00000008363-9463.732Panthera_pardus
ENSSLDG00000022111rpf29973.115ENSPPRG00000000320-9973.115Panthera_pardus
ENSSLDG00000022111rpf29973.115ENSPTIG00000002060RPF29973.115Panthera_tigris_altaica
ENSSLDG00000022111rpf29973.443ENSPTRG00000018503RPF29973.443Pan_troglodytes
ENSSLDG00000022111rpf29974.426ENSPANG00000018834RPF29974.426Papio_anubis
ENSSLDG00000022111rpf29679.661ENSPKIG00000019506rpf29679.661Paramormyrops_kingsleyae
ENSSLDG00000022111rpf29974.426ENSPSIG00000014887RPF29974.426Pelodiscus_sinensis
ENSSLDG00000022111rpf29173.664ENSPEMG00000011413Rpf210073.664Peromyscus_maniculatus_bairdii
ENSSLDG00000022111rpf29773.490ENSPCIG00000028172RPF29971.935Phascolarctos_cinereus
ENSSLDG00000022111rpf210087.338ENSPFOG00000003396rpf210087.338Poecilia_formosa
ENSSLDG00000022111rpf210086.688ENSPLAG00000001226rpf210086.688Poecilia_latipinna
ENSSLDG00000022111rpf210087.338ENSPMEG00000007781rpf210087.338Poecilia_mexicana
ENSSLDG00000022111rpf210086.364ENSPREG00000020525rpf210086.364Poecilia_reticulata
ENSSLDG00000022111rpf29973.770ENSPPYG00000016925RPF29973.770Pongo_abelii
ENSSLDG00000022111rpf26377.949ENSPCAG00000002562RPF27777.487Procavia_capensis
ENSSLDG00000022111rpf29662.007ENSPCOG00000012785RPF29762.143Propithecus_coquereli
ENSSLDG00000022111rpf28079.592ENSPVAG00000003446RPF28377.470Pteropus_vampyrus
ENSSLDG00000022111rpf29881.457ENSPNAG00000000082rpf29881.457Pygocentrus_nattereri
ENSSLDG00000022111rpf29972.459ENSRNOG00000000587Rpf29972.459Rattus_norvegicus
ENSSLDG00000022111rpf29674.324ENSRBIG00000038389RPF29973.780Rhinopithecus_bieti
ENSSLDG00000022111rpf28667.041ENSRROG00000039510-9967.041Rhinopithecus_roxellana
ENSSLDG00000022111rpf28168.254ENSRROG00000028992-8468.254Rhinopithecus_roxellana
ENSSLDG00000022111rpf28172.289ENSRROG00000036685-9372.428Rhinopithecus_roxellana
ENSSLDG00000022111rpf29675.421ENSRROG00000036457RPF29775.421Rhinopithecus_roxellana
ENSSLDG00000022111rpf29645.307YKR081C-8945.307Saccharomyces_cerevisiae
ENSSLDG00000022111rpf28059.109ENSSBOG00000029182-9359.259Saimiri_boliviensis_boliviensis
ENSSLDG00000022111rpf29852.797ENSSBOG00000034420-9951.399Saimiri_boliviensis_boliviensis
ENSSLDG00000022111rpf29658.586ENSSBOG00000025434-9957.239Saimiri_boliviensis_boliviensis
ENSSLDG00000022111rpf29458.889ENSSBOG00000022486-8968.217Saimiri_boliviensis_boliviensis
ENSSLDG00000022111rpf28155.823ENSSBOG00000030264-8755.417Saimiri_boliviensis_boliviensis
ENSSLDG00000022111rpf29972.787ENSSHAG00000002212RPF29972.787Sarcophilus_harrisii
ENSSLDG00000022111rpf29979.221ENSSFOG00015020916rpf210079.221Scleropages_formosus
ENSSLDG00000022111rpf210091.234ENSSMAG00000017499rpf210091.234Scophthalmus_maximus
ENSSLDG00000022111rpf29895.205ENSSDUG00000010383rpf29695.205Seriola_dumerili
ENSSLDG00000022111rpf29852.805ENSSARG00000012063RPF29952.805Sorex_araneus
ENSSLDG00000022111rpf29970.588ENSSPUG00000005108RPF29970.588Sphenodon_punctatus
ENSSLDG00000022111rpf210091.558ENSSPAG00000008035rpf210091.558Stegastes_partitus
ENSSLDG00000022111rpf29972.787ENSSSCG00000004394RPF29972.787Sus_scrofa
ENSSLDG00000022111rpf29674.915ENSTGUG00000012034RPF29674.915Taeniopygia_guttata
ENSSLDG00000022111rpf210086.688ENSTRUG00000018264rpf210086.688Takifugu_rubripes
ENSSLDG00000022111rpf29681.481ENSTNIG00000002749rpf29781.481Tetraodon_nigroviridis
ENSSLDG00000022111rpf27975.771ENSTBEG00000017151RPF28371.146Tupaia_belangeri
ENSSLDG00000022111rpf29974.426ENSTTRG00000012357RPF29974.426Tursiops_truncatus
ENSSLDG00000022111rpf29973.443ENSUAMG00000013497RPF29973.443Ursus_americanus
ENSSLDG00000022111rpf29973.115ENSUMAG00000025488RPF29973.115Ursus_maritimus
ENSSLDG00000022111rpf29675.758ENSVPAG00000009562RPF29775.758Vicugna_pacos
ENSSLDG00000022111rpf29968.662ENSVVUG00000006593-9968.662Vulpes_vulpes
ENSSLDG00000022111rpf29167.816ENSVVUG00000021231-9967.816Vulpes_vulpes
ENSSLDG00000022111rpf29874.751ENSXETG00000021335rpf29874.751Xenopus_tropicalis
ENSSLDG00000022111rpf210082.792ENSXCOG00000001590rpf210082.792Xiphophorus_couchianus
ENSSLDG00000022111rpf210082.927ENSXMAG00000021706rpf210082.927Xiphophorus_maculatus

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