EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000022239 (Gene tree)
Gene ID: -
Gene Symbol: rab12
Alias: zgc:111945
Full Name: RAB12%2C member RAS oncogene family
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 10428 bases
Position: chrPEQF01098920.1:223232-233659
Accession: 111658386
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000028786	MMR_HSR1	PF01926.23	1.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000029633	-	3396	XM_023410894	ENSSLDP00000028786	242 (aa)	XP_023266662	UPI000BBE56C9

Gene Model

Click here to download ENSSLDG00000022239's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000022239's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000022239	rab12	69	42.857	ENSSLDG00000009068	-	78	42.857
ENSSLDG00000022239	rab12	61	39.869	ENSSLDG00000008070	-	63	39.869
ENSSLDG00000022239	rab12	68	42.515	ENSSLDG00000006360	RAB39B	78	42.515
ENSSLDG00000022239	rab12	84	37.500	ENSSLDG00000020676	rab11bb	75	42.424
ENSSLDG00000022239	rab12	81	37.056	ENSSLDG00000005718	-	80	39.884
ENSSLDG00000022239	rab12	68	36.310	ENSSLDG00000000773	rab9a	83	36.310
ENSSLDG00000022239	rab12	65	34.568	ENSSLDG00000009464	rab36	59	34.568
ENSSLDG00000022239	rab12	70	41.279	ENSSLDG00000020354	rab42a	78	41.279
ENSSLDG00000022239	rab12	86	35.849	ENSSLDG00000010503	rab14	80	39.884
ENSSLDG00000022239	rab12	71	40.698	ENSSLDG00000003631	si:dkey-16l2.16	81	40.698
ENSSLDG00000022239	rab12	68	38.182	ENSSLDG00000020918	RAB17	74	38.235
ENSSLDG00000022239	rab12	84	38.028	ENSSLDG00000009438	rab11a	95	38.028
ENSSLDG00000022239	rab12	56	39.416	ENSSLDG00000014812	rab34b	65	38.971
ENSSLDG00000022239	rab12	68	33.333	ENSSLDG00000009573	rab34a	70	33.333
ENSSLDG00000022239	rab12	66	39.623	ENSSLDG00000003264	rab6ba	84	37.143
ENSSLDG00000022239	rab12	66	38.365	ENSSLDG00000022282	rab41	73	39.103
ENSSLDG00000022239	rab12	84	37.037	ENSSLDG00000005221	rab11ba	75	41.818
ENSSLDG00000022239	rab12	65	31.447	ENSSLDG00000025169	rhebl1	85	31.447
ENSSLDG00000022239	rab12	71	37.791	ENSSLDG00000017771	rab5c	76	37.791
ENSSLDG00000022239	rab12	84	39.614	ENSSLDG00000012091	rab25b	81	42.012
ENSSLDG00000022239	rab12	77	43.005	ENSSLDG00000023317	rab15	80	44.444
ENSSLDG00000022239	rab12	65	40.491	ENSSLDG00000022004	rab33a	58	40.244
ENSSLDG00000022239	rab12	79	40.104	ENSSLDG00000022555	rab2a	79	43.452
ENSSLDG00000022239	rab12	84	37.619	ENSSLDG00000012116	rab11al	76	41.818
ENSSLDG00000022239	rab12	67	48.780	ENSSLDG00000006014	rab18b	79	48.780
ENSSLDG00000022239	rab12	84	37.736	ENSSLDG00000005275	-	75	42.424
ENSSLDG00000022239	rab12	82	39.000	ENSSLDG00000009725	-	76	42.308
ENSSLDG00000022239	rab12	77	38.421	ENSSLDG00000012391	RAB7A	81	37.870
ENSSLDG00000022239	rab12	83	35.349	ENSSLDG00000002646	si:dkey-34d22.5	72	40.994
ENSSLDG00000022239	rab12	68	38.690	ENSSLDG00000011597	si:dkey-13a21.4	81	38.690
ENSSLDG00000022239	rab12	83	35.149	ENSSLDG00000015289	-	76	40.000
ENSSLDG00000022239	rab12	77	38.421	ENSSLDG00000024959	-	81	37.870
ENSSLDG00000022239	rab12	74	36.872	ENSSLDG00000011069	rab5aa	81	36.872
ENSSLDG00000022239	rab12	74	40.782	ENSSLDG00000021984	RAB15	84	40.782
ENSSLDG00000022239	rab12	71	50.581	ENSSLDG00000015823	-	86	50.581
ENSSLDG00000022239	rab12	55	32.836	ENSSLDG00000021833	si:ch73-116o1.2	80	30.952
ENSSLDG00000022239	rab12	71	46.512	ENSSLDG00000022533	rab30	84	46.512
ENSSLDG00000022239	rab12	50	35.772	ENSSLDG00000015122	rras2	85	31.792
ENSSLDG00000022239	rab12	70	49.704	ENSSLDG00000018942	rab1ab	83	49.704
ENSSLDG00000022239	rab12	69	31.138	ENSSLDG00000018681	rheb	89	31.138
ENSSLDG00000022239	rab12	79	45.789	ENSSLDG00000011757	-	85	49.704
ENSSLDG00000022239	rab12	74	38.251	ENSSLDG00000019214	zgc:101559	77	38.251
ENSSLDG00000022239	rab12	73	38.764	ENSSLDG00000008584	rab33ba	80	38.764
ENSSLDG00000022239	rab12	77	32.990	ENSSLDG00000000287	rab23	78	35.329
ENSSLDG00000022239	rab12	71	45.930	ENSSLDG00000018024	zgc:171927	80	45.930
ENSSLDG00000022239	rab12	67	48.780	ENSSLDG00000006977	rab18a	79	48.780
ENSSLDG00000022239	rab12	62	31.126	ENSSLDG00000022168	kras	85	31.481
ENSSLDG00000022239	rab12	84	38.835	ENSSLDG00000010880	rab25a	85	38.587
ENSSLDG00000022239	rab12	83	31.863	ENSSLDG00000009351	rab9b	82	35.714
ENSSLDG00000022239	rab12	79	37.173	ENSSLDG00000012474	rab6bb	84	37.714
ENSSLDG00000022239	rab12	76	35.829	ENSSLDG00000004352	-	87	35.829
ENSSLDG00000022239	rab12	70	48.521	ENSSLDG00000012251	rab1ba	84	48.521
ENSSLDG00000022239	rab12	69	30.000	ENSSLDG00000003489	rasl11a	68	30.000
ENSSLDG00000022239	rab12	66	35.220	ENSSLDG00000020438	rab22a	81	35.220

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000022239	rab12	100	80.738	ENSG00000206418	RAB12	100	84.016	Homo_sapiens
ENSSLDG00000022239	rab12	90	78.082	ENSAMEG00000007452	RAB12	94	81.735	Ailuropoda_melanoleuca
ENSSLDG00000022239	rab12	100	98.361	ENSACIG00000020616	rab12	100	98.361	Amphilophus_citrinellus
ENSSLDG00000022239	rab12	100	97.942	ENSAOCG00000002130	rab12	100	97.942	Amphiprion_ocellaris
ENSSLDG00000022239	rab12	100	97.942	ENSAPEG00000013255	rab12	100	97.942	Amphiprion_percula
ENSSLDG00000022239	rab12	100	99.174	ENSATEG00000019683	rab12	100	99.174	Anabas_testudineus
ENSSLDG00000022239	rab12	83	89.500	ENSACAG00000003360	RAB12	86	87.892	Anolis_carolinensis
ENSSLDG00000022239	rab12	100	98.765	ENSACLG00000007696	rab12	100	98.765	Astatotilapia_calliptera
ENSSLDG00000022239	rab12	100	88.618	ENSAMXG00000004882	rab12	100	89.431	Astyanax_mexicanus
ENSSLDG00000022239	rab12	93	84.889	ENSBTAG00000010356	RAB12	100	84.426	Bos_taurus
ENSSLDG00000022239	rab12	93	85.398	ENSCJAG00000015468	RAB12	72	84.898	Callithrix_jacchus
ENSSLDG00000022239	rab12	93	84.444	ENSCAFG00020023721	RAB12	84	84.016	Canis_lupus_dingo
ENSSLDG00000022239	rab12	93	84.889	ENSCHIG00000016103	RAB12	100	84.426	Capra_hircus
ENSSLDG00000022239	rab12	86	85.238	ENSCPOG00000022689	RAB12	100	89.524	Cavia_porcellus
ENSSLDG00000022239	rab12	100	81.633	ENSCCAG00000022862	RAB12	100	84.898	Cebus_capucinus
ENSSLDG00000022239	rab12	91	84.375	ENSCATG00000037784	RAB12	93	87.892	Cercocebus_atys
ENSSLDG00000022239	rab12	84	88.780	ENSCSAG00000017569	RAB12	72	83.468	Chlorocebus_sabaeus
ENSSLDG00000022239	rab12	93	82.743	ENSCPBG00000028375	RAB12	100	82.449	Chrysemys_picta_bellii
ENSSLDG00000022239	rab12	90	84.475	ENSCANG00000031453	RAB12	99	88.128	Colobus_angolensis_palliatus
ENSSLDG00000022239	rab12	93	84.513	ENSCGRG00001006958	Rab12	83	83.673	Cricetulus_griseus_chok1gshd
ENSSLDG00000022239	rab12	100	98.765	ENSCSEG00000016933	rab12	100	98.765	Cynoglossus_semilaevis
ENSSLDG00000022239	rab12	100	96.341	ENSCVAG00000003539	rab12	100	96.341	Cyprinodon_variegatus
ENSSLDG00000022239	rab12	100	87.603	ENSDARG00000089428	rab12	94	93.182	Danio_rerio
ENSSLDG00000022239	rab12	84	88.293	ENSDNOG00000046064	RAB12	51	87.444	Dasypus_novemcinctus
ENSSLDG00000022239	rab12	93	83.260	ENSDORG00000008920	Rab12	98	87.892	Dipodomys_ordii
ENSSLDG00000022239	rab12	78	65.079	ENSEBUG00000006581	rab12	89	66.484	Eptatretus_burgeri
ENSSLDG00000022239	rab12	93	84.513	ENSEASG00005002926	RAB12	83	84.082	Equus_asinus_asinus
ENSSLDG00000022239	rab12	93	84.513	ENSECAG00000007384	RAB12	71	84.082	Equus_caballus
ENSSLDG00000022239	rab12	100	91.736	ENSELUG00000007123	rab12	100	90.083	Esox_lucius
ENSSLDG00000022239	rab12	93	84.444	ENSFCAG00000027710	RAB12	72	84.016	Felis_catus
ENSSLDG00000022239	rab12	100	96.327	ENSFHEG00000004319	rab12	100	96.327	Fundulus_heteroclitus
ENSSLDG00000022239	rab12	86	92.308	ENSGMOG00000012335	rab12	87	90.385	Gadus_morhua
ENSSLDG00000022239	rab12	93	83.772	ENSGALG00000033608	RAB12	89	87.892	Gallus_gallus
ENSSLDG00000022239	rab12	90	93.548	ENSGACG00000016639	rab12	100	93.548	Gasterosteus_aculeatus
ENSSLDG00000022239	rab12	93	82.301	ENSGAGG00000007278	RAB12	100	82.041	Gopherus_agassizii
ENSSLDG00000022239	rab12	100	98.765	ENSHBUG00000008497	rab12	100	98.765	Haplochromis_burtoni
ENSSLDG00000022239	rab12	95	81.034	ENSHGLG00000006189	RAB12	86	88.235	Heterocephalus_glaber_female
ENSSLDG00000022239	rab12	100	92.593	ENSHCOG00000012376	rab12	100	92.181	Hippocampus_comes
ENSSLDG00000022239	rab12	91	92.760	ENSIPUG00000017401	rab12	90	92.727	Ictalurus_punctatus
ENSSLDG00000022239	rab12	93	81.858	ENSSTOG00000025122	RAB12	96	87.671	Ictidomys_tridecemlineatus
ENSSLDG00000022239	rab12	91	84.375	ENSJJAG00000019064	Rab12	98	87.892	Jaculus_jaculus
ENSSLDG00000022239	rab12	100	92.975	ENSKMAG00000020056	rab12	100	91.736	Kryptolebias_marmoratus
ENSSLDG00000022239	rab12	100	98.760	ENSLBEG00000013756	rab12	100	98.760	Labrus_bergylta
ENSSLDG00000022239	rab12	91	86.996	ENSLACG00000010461	RAB12	90	86.996	Latimeria_chalumnae
ENSSLDG00000022239	rab12	100	84.274	ENSLOCG00000002680	rab12	100	87.097	Lepisosteus_oculatus
ENSSLDG00000022239	rab12	100	80.894	ENSMFAG00000043551	RAB12	100	84.146	Macaca_fascicularis
ENSSLDG00000022239	rab12	84	88.780	ENSMNEG00000040853	RAB12	88	87.892	Macaca_nemestrina
ENSSLDG00000022239	rab12	100	99.174	ENSMAMG00000006862	rab12	100	99.174	Mastacembelus_armatus
ENSSLDG00000022239	rab12	100	98.765	ENSMZEG00005024316	rab12	100	98.765	Maylandia_zebra
ENSSLDG00000022239	rab12	83	84.804	ENSMGAG00000009197	RAB12	100	88.725	Meleagris_gallopavo
ENSSLDG00000022239	rab12	93	84.513	ENSMAUG00000008371	Rab12	83	83.673	Mesocricetus_auratus
ENSSLDG00000022239	rab12	91	83.929	ENSMICG00000030661	RAB12	93	87.444	Microcebus_murinus
ENSSLDG00000022239	rab12	90	84.018	ENSMOCG00000000452	Rab12	100	87.671	Microtus_ochrogaster
ENSSLDG00000022239	rab12	86	88.517	ENSMODG00000021452	RAB12	66	88.341	Monodelphis_domestica
ENSSLDG00000022239	rab12	100	96.281	ENSMALG00000015762	rab12	100	96.281	Monopterus_albus
ENSSLDG00000022239	rab12	93	85.398	MGP_CAROLIEiJ_G0021839	Rab12	84	84.490	Mus_caroli
ENSSLDG00000022239	rab12	93	85.398	ENSMUSG00000023460	Rab12	100	84.490	Mus_musculus
ENSSLDG00000022239	rab12	93	85.398	MGP_PahariEiJ_G0020826	Rab12	100	84.490	Mus_pahari
ENSSLDG00000022239	rab12	93	85.398	MGP_SPRETEiJ_G0022750	Rab12	83	84.490	Mus_spretus
ENSSLDG00000022239	rab12	100	80.816	ENSMLUG00000002883	RAB12	100	84.082	Myotis_lucifugus
ENSSLDG00000022239	rab12	91	76.786	ENSNGAG00000019722	-	91	76.682	Nannospalax_galili
ENSSLDG00000022239	rab12	95	81.545	ENSNGAG00000024103	-	95	87.444	Nannospalax_galili
ENSSLDG00000022239	rab12	100	98.765	ENSNBRG00000014428	rab12	100	98.765	Neolamprologus_brichardi
ENSSLDG00000022239	rab12	100	80.328	ENSNLEG00000006939	RAB12	100	83.607	Nomascus_leucogenys
ENSSLDG00000022239	rab12	100	80.894	ENSMEUG00000000493	RAB12	91	88.341	Notamacropus_eugenii
ENSSLDG00000022239	rab12	90	85.388	ENSODEG00000006414	RAB12	100	89.041	Octodon_degus
ENSSLDG00000022239	rab12	100	98.354	ENSONIG00000018469	rab12	100	98.354	Oreochromis_niloticus
ENSSLDG00000022239	rab12	100	97.521	ENSORLG00000003902	rab12	100	97.521	Oryzias_latipes
ENSSLDG00000022239	rab12	100	97.107	ENSORLG00020005131	rab12	100	97.107	Oryzias_latipes_hni
ENSSLDG00000022239	rab12	100	97.107	ENSORLG00015007869	rab12	100	97.107	Oryzias_latipes_hsok
ENSSLDG00000022239	rab12	100	98.347	ENSOMEG00000008191	rab12	100	98.347	Oryzias_melastigma
ENSSLDG00000022239	rab12	86	84.762	ENSOGAG00000028002	RAB12	99	88.571	Otolemur_garnettii
ENSSLDG00000022239	rab12	79	89.529	ENSOARG00000000728	RAB12	88	87.442	Ovis_aries
ENSSLDG00000022239	rab12	85	84.541	ENSPPAG00000009152	RAB12	97	88.835	Pan_paniscus
ENSSLDG00000022239	rab12	100	80.738	ENSPPRG00000024521	RAB12	100	84.016	Panthera_pardus
ENSSLDG00000022239	rab12	100	80.738	ENSPTRG00000009853	RAB12	100	84.016	Pan_troglodytes
ENSSLDG00000022239	rab12	100	80.972	ENSPANG00000009320	RAB12	90	88.341	Papio_anubis
ENSSLDG00000022239	rab12	100	89.712	ENSPKIG00000008579	rab12	100	89.300	Paramormyrops_kingsleyae
ENSSLDG00000022239	rab12	100	92.562	ENSPMGG00000001890	rab12	100	92.562	Periophthalmus_magnuspinnatus
ENSSLDG00000022239	rab12	93	84.956	ENSPEMG00000021032	Rab12	84	84.082	Peromyscus_maniculatus_bairdii
ENSSLDG00000022239	rab12	93	84.581	ENSPCIG00000010453	RAB12	56	88.341	Phascolarctos_cinereus
ENSSLDG00000022239	rab12	100	94.672	ENSPFOG00000001579	rab12	100	94.672	Poecilia_formosa
ENSSLDG00000022239	rab12	100	94.672	ENSPLAG00000013594	rab12	100	94.672	Poecilia_latipinna
ENSSLDG00000022239	rab12	100	94.672	ENSPMEG00000010417	rab12	100	94.672	Poecilia_mexicana
ENSSLDG00000022239	rab12	100	95.492	ENSPREG00000017487	rab12	100	95.492	Poecilia_reticulata
ENSSLDG00000022239	rab12	93	84.444	ENSPPYG00000009015	-	72	84.016	Pongo_abelii
ENSSLDG00000022239	rab12	100	80.328	ENSPCAG00000015007	RAB12	100	83.607	Procavia_capensis
ENSSLDG00000022239	rab12	100	80.738	ENSPCOG00000019816	RAB12	100	84.016	Propithecus_coquereli
ENSSLDG00000022239	rab12	100	80.328	ENSPVAG00000002757	RAB12	100	83.607	Pteropus_vampyrus
ENSSLDG00000022239	rab12	100	98.765	ENSPNYG00000023905	rab12	100	98.765	Pundamilia_nyererei
ENSSLDG00000022239	rab12	100	98.765	ENSPNYG00000005654	rab12	100	98.765	Pundamilia_nyererei
ENSSLDG00000022239	rab12	100	88.618	ENSPNAG00000015031	rab12	100	89.431	Pygocentrus_nattereri
ENSSLDG00000022239	rab12	93	83.260	ENSRNOG00000019295	Rab12	91	82.819	Rattus_norvegicus
ENSSLDG00000022239	rab12	91	84.375	ENSRBIG00000028760	RAB12	96	87.892	Rhinopithecus_bieti
ENSSLDG00000022239	rab12	91	84.375	ENSRROG00000019249	RAB12	93	87.892	Rhinopithecus_roxellana
ENSSLDG00000022239	rab12	95	79.654	ENSSBOG00000021125	RAB12	80	88.517	Saimiri_boliviensis_boliviensis
ENSSLDG00000022239	rab12	93	84.071	ENSSHAG00000001489	RAB12	90	88.670	Sarcophilus_harrisii
ENSSLDG00000022239	rab12	100	97.934	ENSSMAG00000012678	rab12	100	97.934	Scophthalmus_maximus
ENSSLDG00000022239	rab12	100	100.000	ENSSDUG00000008505	rab12	100	100.000	Seriola_dumerili
ENSSLDG00000022239	rab12	91	85.202	ENSSPUG00000003222	RAB12	91	88.789	Sphenodon_punctatus
ENSSLDG00000022239	rab12	100	98.354	ENSSPAG00000010822	rab12	100	98.354	Stegastes_partitus
ENSSLDG00000022239	rab12	93	84.444	ENSSSCG00000038026	RAB12	100	84.426	Sus_scrofa
ENSSLDG00000022239	rab12	86	88.517	ENSTGUG00000009889	RAB12	89	88.341	Taeniopygia_guttata
ENSSLDG00000022239	rab12	100	94.215	ENSTRUG00000024455	rab12	100	94.215	Takifugu_rubripes
ENSSLDG00000022239	rab12	100	95.041	ENSTNIG00000014859	rab12	100	95.041	Tetraodon_nigroviridis
ENSSLDG00000022239	rab12	90	84.475	ENSTTRG00000008711	RAB12	99	88.128	Tursiops_truncatus
ENSSLDG00000022239	rab12	100	80.738	ENSUAMG00000018092	RAB12	100	84.016	Ursus_americanus
ENSSLDG00000022239	rab12	90	83.710	ENSVVUG00000011748	RAB12	99	87.330	Vulpes_vulpes
ENSSLDG00000022239	rab12	89	88.532	ENSXETG00000004289	rab12	72	88.393	Xenopus_tropicalis
ENSSLDG00000022239	rab12	100	94.262	ENSXCOG00000019310	rab12	100	94.672	Xiphophorus_couchianus
ENSSLDG00000022239	rab12	100	95.492	ENSXMAG00000023617	rab12	100	95.492	Xiphophorus_maculatus