EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000022256 (Gene tree)
Gene ID: -
Gene Symbol: rbfox1l
Alias: Fox-1|ZFmu1A11s|a2bp1l|hm:zeh0082|zeh0082
Full Name: RNA binding protein fox-1 homolog 1-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 11380 bases
Position: chrPEQF01099304.1:19019-30398
Accession: 111669841
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000028841	Fox-1_C	PF12414.8	4.2e-27	1	1
ENSSLDP00000028841	RRM_1	PF00076.22	9.9e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000029688	-	1158	XM_023426294	ENSSLDP00000028841	385 (aa)	XP_023282062	-

Gene Model

Click here to download ENSSLDG00000022256's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000022256's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000022256	rbfox1l	89	54.416	ENSSLDG00000016098	-	68	67.984
ENSSLDG00000022256	rbfox1l	96	51.733	ENSSLDG00000000149	rbfox3b	81	56.452
ENSSLDG00000022256	rbfox1l	63	57.414	ENSSLDG00000018052	-	56	57.678
ENSSLDG00000022256	rbfox1l	83	52.744	ENSSLDG00000009353	rbfox1	76	55.705

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000022256	rbfox1l	97	87.766	ENSAPOG00000016304	rbfox1l	98	88.830	Acanthochromis_polyacanthus
ENSSLDG00000022256	rbfox1l	100	83.463	ENSACIG00000006441	rbfox1l	100	83.463	Amphilophus_citrinellus
ENSSLDG00000022256	rbfox1l	83	86.378	ENSAOCG00000020938	rbfox1l	94	83.077	Amphiprion_ocellaris
ENSSLDG00000022256	rbfox1l	100	88.402	ENSAPEG00000008232	rbfox1l	100	89.433	Amphiprion_percula
ENSSLDG00000022256	rbfox1l	100	90.649	ENSATEG00000022649	rbfox1l	100	90.649	Anabas_testudineus
ENSSLDG00000022256	rbfox1l	64	70.980	ENSACAG00000011931	-	89	69.600	Anolis_carolinensis
ENSSLDG00000022256	rbfox1l	100	87.113	ENSACLG00000021394	rbfox1l	100	87.371	Astatotilapia_calliptera
ENSSLDG00000022256	rbfox1l	100	85.825	ENSAMXG00000010470	rbfox1l	100	83.505	Astyanax_mexicanus
ENSSLDG00000022256	rbfox1l	100	52.645	ENSCPBG00000010944	-	100	54.453	Chrysemys_picta_bellii
ENSSLDG00000022256	rbfox1l	100	87.824	ENSCSEG00000018898	rbfox1l	100	88.083	Cynoglossus_semilaevis
ENSSLDG00000022256	rbfox1l	100	86.082	ENSCVAG00000007986	rbfox1l	100	86.082	Cyprinodon_variegatus
ENSSLDG00000022256	rbfox1l	100	81.347	ENSDARG00000021184	rbfox1l	100	81.959	Danio_rerio
ENSSLDG00000022256	rbfox1l	100	81.425	ENSELUG00000015077	rbfox1l	100	81.425	Esox_lucius
ENSSLDG00000022256	rbfox1l	78	95.122	ENSFHEG00000016557	rbfox1l	95	95.122	Fundulus_heteroclitus
ENSSLDG00000022256	rbfox1l	100	81.701	ENSGMOG00000005040	rbfox1l	100	81.959	Gadus_morhua
ENSSLDG00000022256	rbfox1l	92	84.401	ENSGAFG00000013211	rbfox1l	97	84.401	Gambusia_affinis
ENSSLDG00000022256	rbfox1l	100	87.113	ENSGACG00000010757	rbfox1l	100	87.113	Gasterosteus_aculeatus
ENSSLDG00000022256	rbfox1l	66	65.882	ENSGAGG00000012440	-	84	68.699	Gopherus_agassizii
ENSSLDG00000022256	rbfox1l	100	87.113	ENSHBUG00000013406	rbfox1l	100	87.371	Haplochromis_burtoni
ENSSLDG00000022256	rbfox1l	100	84.319	ENSHCOG00000020771	rbfox1l	100	82.519	Hippocampus_comes
ENSSLDG00000022256	rbfox1l	99	77.083	ENSIPUG00000000065	rbfox1l	99	76.731	Ictalurus_punctatus
ENSSLDG00000022256	rbfox1l	100	85.128	ENSKMAG00000005146	rbfox1l	100	84.143	Kryptolebias_marmoratus
ENSSLDG00000022256	rbfox1l	100	90.464	ENSLBEG00000017089	rbfox1l	100	90.722	Labrus_bergylta
ENSSLDG00000022256	rbfox1l	100	88.918	ENSMAMG00000019480	rbfox1l	100	89.175	Mastacembelus_armatus
ENSSLDG00000022256	rbfox1l	100	87.113	ENSMZEG00005016374	rbfox1l	100	87.371	Maylandia_zebra
ENSSLDG00000022256	rbfox1l	100	88.312	ENSMMOG00000016530	rbfox1l	100	86.494	Mola_mola
ENSSLDG00000022256	rbfox1l	100	86.494	ENSMALG00000009384	rbfox1l	100	86.494	Monopterus_albus
ENSSLDG00000022256	rbfox1l	100	88.052	ENSNBRG00000003346	rbfox1l	100	88.312	Neolamprologus_brichardi
ENSSLDG00000022256	rbfox1l	100	87.629	ENSONIG00000012754	rbfox1l	100	87.887	Oreochromis_niloticus
ENSSLDG00000022256	rbfox1l	100	85.861	ENSORLG00000011269	rbfox1l	100	86.856	Oryzias_latipes
ENSSLDG00000022256	rbfox1l	100	86.598	ENSORLG00020000162	rbfox1l	100	87.629	Oryzias_latipes_hni
ENSSLDG00000022256	rbfox1l	100	86.340	ENSORLG00015013464	rbfox1l	100	87.371	Oryzias_latipes_hsok
ENSSLDG00000022256	rbfox1l	100	87.371	ENSOMEG00000010584	rbfox1l	100	88.402	Oryzias_melastigma
ENSSLDG00000022256	rbfox1l	100	87.047	ENSPKIG00000012029	rbfox1l	100	84.935	Paramormyrops_kingsleyae
ENSSLDG00000022256	rbfox1l	100	77.778	ENSPMGG00000012082	rbfox1l	100	76.227	Periophthalmus_magnuspinnatus
ENSSLDG00000022256	rbfox1l	100	86.082	ENSPFOG00000009338	rbfox1l	100	86.340	Poecilia_formosa
ENSSLDG00000022256	rbfox1l	85	76.506	ENSPLAG00000012816	rbfox1l	99	76.506	Poecilia_latipinna
ENSSLDG00000022256	rbfox1l	100	85.052	ENSPMEG00000017597	rbfox1l	100	84.021	Poecilia_mexicana
ENSSLDG00000022256	rbfox1l	100	85.052	ENSPREG00000007940	rbfox1l	100	84.021	Poecilia_reticulata
ENSSLDG00000022256	rbfox1l	100	86.856	ENSPNYG00000002098	rbfox1l	100	87.113	Pundamilia_nyererei
ENSSLDG00000022256	rbfox1l	100	84.576	ENSPNAG00000001620	rbfox1l	100	81.748	Pygocentrus_nattereri
ENSSLDG00000022256	rbfox1l	100	81.088	ENSSFOG00015000675	rbfox1l	100	81.347	Scleropages_formosus
ENSSLDG00000022256	rbfox1l	100	88.660	ENSSMAG00000013090	rbfox1l	100	88.918	Scophthalmus_maximus
ENSSLDG00000022256	rbfox1l	100	99.223	ENSSDUG00000008705	rbfox1l	100	99.223	Seriola_dumerili
ENSSLDG00000022256	rbfox1l	100	88.918	ENSSPAG00000016620	rbfox1l	100	89.948	Stegastes_partitus
ENSSLDG00000022256	rbfox1l	96	83.333	ENSTRUG00000015905	rbfox1l	100	83.333	Takifugu_rubripes
ENSSLDG00000022256	rbfox1l	65	77.860	ENSTNIG00000008088	rbfox1l	97	78.409	Tetraodon_nigroviridis
ENSSLDG00000022256	rbfox1l	100	86.082	ENSXMAG00000023471	rbfox1l	100	86.340	Xiphophorus_maculatus