EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000022573 (Gene tree)
Gene ID: -
Gene Symbol: zbtb18
Alias: si:ch211-221n23.1|znf238
Full Name: zinc finger and BTB domain containing 18
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 1698 bases
Position: chrPEQF01099425.1:220916-222613
Accession: 111645273
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000029233	zf-C2H2	PF00096.26	3.1e-12	1	3
ENSSLDP00000029233	zf-C2H2	PF00096.26	3.1e-12	2	3
ENSSLDP00000029233	zf-C2H2	PF00096.26	3.1e-12	3	3
ENSSLDP00000029233	zf-met	PF12874.7	1.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000030087	-	1698	XM_023394395	ENSSLDP00000029233	565 (aa)	XP_023250163	UPI000C6F85C0

Gene Model

Click here to download ENSSLDG00000022573's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000022573's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000022573	zbtb18	63	36.220	ENSSLDG00000018959	znf131	74	36.220
ENSSLDG00000022573	zbtb18	95	41.026	ENSSLDG00000002956	zbtb16a	54	41.026
ENSSLDG00000022573	zbtb18	54	34.513	ENSSLDG00000007826	ZBTB14	68	34.513
ENSSLDG00000022573	zbtb18	56	34.109	ENSSLDG00000021148	bcl6b	82	34.109

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000022573	zbtb18	100	97.887	ENSAPOG00000005168	zbtb18	98	97.887	Acanthochromis_polyacanthus
ENSSLDG00000022573	zbtb18	100	86.372	ENSACIG00000008655	zbtb18	98	86.372	Amphilophus_citrinellus
ENSSLDG00000022573	zbtb18	100	97.887	ENSAOCG00000014105	zbtb18	98	97.887	Amphiprion_ocellaris
ENSSLDG00000022573	zbtb18	100	97.373	ENSAPEG00000003817	zbtb18	77	97.373	Amphiprion_percula
ENSSLDG00000022573	zbtb18	100	96.991	ENSATEG00000010192	zbtb18	98	96.991	Anabas_testudineus
ENSSLDG00000022573	zbtb18	100	97.168	ENSACLG00000022978	zbtb18	97	97.168	Astatotilapia_calliptera
ENSSLDG00000022573	zbtb18	100	73.621	ENSAMXG00000042119	zbtb18	98	73.103	Astyanax_mexicanus
ENSSLDG00000022573	zbtb18	100	93.097	ENSCSEG00000003083	zbtb18	98	93.097	Cynoglossus_semilaevis
ENSSLDG00000022573	zbtb18	100	94.867	ENSCVAG00000016785	zbtb18	98	94.867	Cyprinodon_variegatus
ENSSLDG00000022573	zbtb18	100	72.426	ENSDARG00000028228	zbtb18	100	74.346	Danio_rerio
ENSSLDG00000022573	zbtb18	100	75.439	ENSELUG00000013471	zbtb18	98	75.088	Esox_lucius
ENSSLDG00000022573	zbtb18	100	94.876	ENSFHEG00000020005	zbtb18	98	94.876	Fundulus_heteroclitus
ENSSLDG00000022573	zbtb18	56	95.238	ENSGMOG00000018718	zbtb18	58	91.241	Gadus_morhua
ENSSLDG00000022573	zbtb18	100	92.933	ENSGAFG00000000619	zbtb18	98	92.933	Gambusia_affinis
ENSSLDG00000022573	zbtb18	100	92.212	ENSGACG00000010518	zbtb18	96	92.920	Gasterosteus_aculeatus
ENSSLDG00000022573	zbtb18	100	97.168	ENSHBUG00000013654	zbtb18	98	97.168	Haplochromis_burtoni
ENSSLDG00000022573	zbtb18	62	82.105	ENSHCOG00000002345	zbtb18	94	82.105	Hippocampus_comes
ENSSLDG00000022573	zbtb18	100	66.899	ENSIPUG00000008912	zbtb18	98	66.608	Ictalurus_punctatus
ENSSLDG00000022573	zbtb18	100	95.752	ENSKMAG00000002780	zbtb18	98	95.752	Kryptolebias_marmoratus
ENSSLDG00000022573	zbtb18	100	95.398	ENSLBEG00000014796	zbtb18	98	95.398	Labrus_bergylta
ENSSLDG00000022573	zbtb18	85	60.526	ENSMFAG00000033326	ZBTB18	98	59.432	Macaca_fascicularis
ENSSLDG00000022573	zbtb18	85	60.729	ENSMMUG00000015664	ZBTB18	100	59.635	Macaca_mulatta
ENSSLDG00000022573	zbtb18	100	97.699	ENSMAMG00000021720	zbtb18	98	97.699	Mastacembelus_armatus
ENSSLDG00000022573	zbtb18	100	97.168	ENSMZEG00005027394	zbtb18	98	97.168	Maylandia_zebra
ENSSLDG00000022573	zbtb18	96	51.013	ENSMGAG00000015389	-	100	50.832	Meleagris_gallopavo
ENSSLDG00000022573	zbtb18	100	87.788	ENSMMOG00000007888	zbtb18	99	87.788	Mola_mola
ENSSLDG00000022573	zbtb18	100	96.283	ENSMALG00000000725	zbtb18	98	96.283	Monopterus_albus
ENSSLDG00000022573	zbtb18	100	97.699	ENSNBRG00000013796	zbtb18	100	97.699	Neolamprologus_brichardi
ENSSLDG00000022573	zbtb18	100	97.522	ENSONIG00000000862	zbtb18	98	97.522	Oreochromis_niloticus
ENSSLDG00000022573	zbtb18	100	95.575	ENSORLG00000027425	zbtb18	97	95.575	Oryzias_latipes
ENSSLDG00000022573	zbtb18	100	95.752	ENSORLG00020011988	zbtb18	97	95.752	Oryzias_latipes_hni
ENSSLDG00000022573	zbtb18	100	95.575	ENSORLG00015017457	zbtb18	97	95.575	Oryzias_latipes_hsok
ENSSLDG00000022573	zbtb18	100	95.752	ENSOMEG00000011249	zbtb18	97	95.752	Oryzias_melastigma
ENSSLDG00000022573	zbtb18	100	70.455	ENSPKIG00000021964	zbtb18	95	71.107	Paramormyrops_kingsleyae
ENSSLDG00000022573	zbtb18	100	55.613	ENSPKIG00000008787	-	100	55.613	Paramormyrops_kingsleyae
ENSSLDG00000022573	zbtb18	100	83.363	ENSPMGG00000008020	zbtb18	100	83.363	Periophthalmus_magnuspinnatus
ENSSLDG00000022573	zbtb18	100	92.580	ENSPFOG00000022080	zbtb18	100	92.580	Poecilia_formosa
ENSSLDG00000022573	zbtb18	100	86.926	ENSPLAG00000011299	-	100	87.102	Poecilia_latipinna
ENSSLDG00000022573	zbtb18	100	86.926	ENSPLAG00000020960	zbtb18	100	87.102	Poecilia_latipinna
ENSSLDG00000022573	zbtb18	100	93.463	ENSPMEG00000007554	zbtb18	100	93.463	Poecilia_mexicana
ENSSLDG00000022573	zbtb18	100	93.816	ENSPREG00000008576	zbtb18	98	93.816	Poecilia_reticulata
ENSSLDG00000022573	zbtb18	100	97.168	ENSPNYG00000001530	zbtb18	98	97.168	Pundamilia_nyererei
ENSSLDG00000022573	zbtb18	86	72.177	ENSPNAG00000014066	zbtb18	86	71.371	Pygocentrus_nattereri
ENSSLDG00000022573	zbtb18	100	95.398	ENSSMAG00000018041	zbtb18	100	95.398	Scophthalmus_maximus
ENSSLDG00000022573	zbtb18	100	99.646	ENSSDUG00000018660	zbtb18	100	99.646	Seriola_dumerili
ENSSLDG00000022573	zbtb18	54	49.515	ENSSPUG00000010554	-	100	50.549	Sphenodon_punctatus
ENSSLDG00000022573	zbtb18	100	97.876	ENSSPAG00000002691	zbtb18	98	97.876	Stegastes_partitus
ENSSLDG00000022573	zbtb18	100	94.690	ENSTRUG00000020604	zbtb18	100	94.690	Takifugu_rubripes
ENSSLDG00000022573	zbtb18	100	86.396	ENSTNIG00000000430	zbtb18	98	86.396	Tetraodon_nigroviridis
ENSSLDG00000022573	zbtb18	100	87.633	ENSXCOG00000013308	zbtb18	100	88.516	Xiphophorus_couchianus
ENSSLDG00000022573	zbtb18	100	83.746	ENSXMAG00000018241	zbtb18	99	83.922	Xiphophorus_maculatus