EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000022595 (Gene tree)
Gene ID: -
Gene Symbol: chd7
Alias: si:ch211-197o6.2|wu:cegs2051|wu:fb37f10|wu:fb39h04|wu:fd19h06
Full Name: chromodomain helicase DNA binding protein 7
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 51411 bases
Position: chrPEQF01098687.1:538919-590329
Accession: ZDB-GENE-070912-179
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000029318	BRK	PF07533.16	1.9e-21	1	1
ENSSLDP00000029346	BRK	PF07533.16	6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000030172	-	4842	-	ENSSLDP00000029318	1613 (aa)	-	-
ENSSLDT00000030201	-	2556	-	ENSSLDP00000029346	851 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000022595's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000022595's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000022595	chd7	90	55.665	ENSG00000171316	CHD7	84	70.370	Homo_sapiens
ENSSLDG00000022595	chd7	68	94.737	ENSAPOG00000009351	chd7	50	76.250	Acanthochromis_polyacanthus
ENSSLDG00000022595	chd7	66	72.444	ENSACIG00000001590	chd7	50	71.429	Amphilophus_citrinellus
ENSSLDG00000022595	chd7	68	90.000	ENSAOCG00000002337	chd7	51	73.136	Amphiprion_ocellaris
ENSSLDG00000022595	chd7	97	94.706	ENSAPEG00000010332	chd7	50	94.152	Amphiprion_percula
ENSSLDG00000022595	chd7	68	78.012	ENSATEG00000002590	chd7	52	78.265	Anabas_testudineus
ENSSLDG00000022595	chd7	91	54.352	ENSACAG00000005760	CHD7	50	55.766	Anolis_carolinensis
ENSSLDG00000022595	chd7	90	55.665	ENSCATG00000020229	CHD7	54	49.364	Cercocebus_atys
ENSSLDG00000022595	chd7	90	55.665	ENSCANG00000041382	CHD7	54	49.364	Colobus_angolensis_palliatus
ENSSLDG00000022595	chd7	95	54.321	ENSCGRG00001011949	Chd7	51	51.981	Cricetulus_griseus_chok1gshd
ENSSLDG00000022595	chd7	95	59.330	ENSDARG00000075211	chd7	52	58.885	Danio_rerio
ENSSLDG00000022595	chd7	95	61.558	ENSELUG00000024442	chd7	54	63.569	Esox_lucius
ENSSLDG00000022595	chd7	91	54.996	ENSGGOG00000012224	CHD7	51	51.282	Gorilla_gorilla
ENSSLDG00000022595	chd7	93	95.294	ENSHBUG00000019225	chd7	50	94.737	Haplochromis_burtoni
ENSSLDG00000022595	chd7	96	92.353	ENSHCOG00000014380	chd7	50	85.000	Hippocampus_comes
ENSSLDG00000022595	chd7	89	54.613	ENSSTOG00000011949	CHD7	53	50.336	Ictidomys_tridecemlineatus
ENSSLDG00000022595	chd7	97	85.246	ENSLBEG00000020842	chd7	50	92.982	Labrus_bergylta
ENSSLDG00000022595	chd7	90	55.665	ENSMFAG00000041825	CHD7	54	49.364	Macaca_fascicularis
ENSSLDG00000022595	chd7	90	55.665	ENSMMUG00000011584	CHD7	54	49.364	Macaca_mulatta
ENSSLDG00000022595	chd7	89	55.611	ENSMNEG00000040978	CHD7	51	51.039	Macaca_nemestrina
ENSSLDG00000022595	chd7	90	55.665	ENSMLEG00000038817	CHD7	54	49.364	Mandrillus_leucophaeus
ENSSLDG00000022595	chd7	93	95.294	ENSMZEG00005010646	chd7	50	94.737	Maylandia_zebra
ENSSLDG00000022595	chd7	89	54.229	ENSMAUG00000001000	Chd7	51	51.163	Mesocricetus_auratus
ENSSLDG00000022595	chd7	89	54.863	ENSMICG00000002430	CHD7	53	49.888	Microcebus_murinus
ENSSLDG00000022595	chd7	99	72.554	ENSMMOG00000021538	-	91	77.841	Mola_mola
ENSSLDG00000022595	chd7	93	52.405	MGP_CAROLIEiJ_G0025797	Chd7	51	51.887	Mus_caroli
ENSSLDG00000022595	chd7	99	49.304	ENSMUSG00000041235	Chd7	51	51.643	Mus_musculus
ENSSLDG00000022595	chd7	98	48.016	MGP_PahariEiJ_G0023920	Chd7	51	50.939	Mus_pahari
ENSSLDG00000022595	chd7	93	52.211	MGP_SPRETEiJ_G0026745	Chd7	51	51.643	Mus_spretus
ENSSLDG00000022595	chd7	92	53.746	ENSNGAG00000010767	Chd7	50	51.878	Nannospalax_galili
ENSSLDG00000022595	chd7	90	54.321	ENSNLEG00000002027	CHD7	50	51.163	Nomascus_leucogenys
ENSSLDG00000022595	chd7	91	77.078	ENSONIG00000016614	chd7	52	77.169	Oreochromis_niloticus
ENSSLDG00000022595	chd7	91	54.996	ENSPTRG00000020286	CHD7	51	51.282	Pan_troglodytes
ENSSLDG00000022595	chd7	90	55.665	ENSPANG00000018419	CHD7	54	49.364	Papio_anubis
ENSSLDG00000022595	chd7	92	52.967	ENSPEMG00000023028	Chd7	50	51.319	Peromyscus_maniculatus_bairdii
ENSSLDG00000022595	chd7	95	54.181	ENSPCIG00000000025	-	63	53.853	Phascolarctos_cinereus
ENSSLDG00000022595	chd7	96	95.062	ENSPFOG00000004891	chd7	83	77.916	Poecilia_formosa
ENSSLDG00000022595	chd7	90	56.158	ENSPCOG00000013850	CHD7	51	51.991	Propithecus_coquereli
ENSSLDG00000022595	chd7	90	55.665	ENSRBIG00000043575	CHD7	54	49.364	Rhinopithecus_bieti
ENSSLDG00000022595	chd7	90	55.665	ENSRROG00000008981	CHD7	54	49.364	Rhinopithecus_roxellana
ENSSLDG00000022595	chd7	100	80.907	ENSSMAG00000001030	chd7	100	81.023	Scophthalmus_maximus
ENSSLDG00000022595	chd7	98	98.571	ENSSDUG00000013773	chd7	54	100.000	Seriola_dumerili
ENSSLDG00000022595	chd7	89	52.555	ENSTTRG00000004221	CHD7	50	54.824	Tursiops_truncatus