EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000022840 (Gene tree)
Gene ID: -
Gene Symbol: YTHDC2
Alias: DKFZp564A186|FLJ10053|FLJ2194
Full Name: YTH domain containing 2
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 19554 bases
Position: chrPEQF01098963.1:903763-923316
Accession: 111659643
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000029667	R3H	PF01424.22	6.4e-12	1	1
ENSSLDP00000029712	R3H	PF01424.22	6.4e-12	1	1
ENSSLDP00000029712	DEAD	PF00270.29	2.1e-08	1	1
ENSSLDP00000029667	DEAD	PF00270.29	2.2e-08	1	1
ENSSLDP00000029712	YTH	PF04146.15	6.4e-42	1	1
ENSSLDP00000029667	YTH	PF04146.15	7.6e-42	1	1
ENSSLDP00000029712	HA2	PF04408.23	1.2e-18	1	1
ENSSLDP00000029667	HA2	PF04408.23	1.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000030529	YTHDC2-201	5101	XM_023412660	ENSSLDP00000029667	1390 (aa)	XP_023268428	-
ENSSLDT00000030574	YTHDC2-202	4146	-	ENSSLDP00000029712	1381 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000022840's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000022840's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000022840	YTHDC2	54	48.624	ENSSLDG00000003926	dhx9	62	48.624
ENSSLDG00000022840	YTHDC2	53	49.099	ENSSLDG00000006979	dhx57	58	49.099

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000022840	YTHDC2	83	69.323	ENSG00000047188	YTHDC2	96	67.507	Homo_sapiens
ENSSLDG00000022840	YTHDC2	72	78.812	ENSAPOG00000013442	YTHDC2	97	79.204	Acanthochromis_polyacanthus
ENSSLDG00000022840	YTHDC2	97	66.211	ENSAMEG00000006598	YTHDC2	97	66.714	Ailuropoda_melanoleuca
ENSSLDG00000022840	YTHDC2	98	78.624	ENSACIG00000012809	YTHDC2	99	78.624	Amphilophus_citrinellus
ENSSLDG00000022840	YTHDC2	90	81.156	ENSAOCG00000018480	YTHDC2	100	81.235	Amphiprion_ocellaris
ENSSLDG00000022840	YTHDC2	100	80.427	ENSAPEG00000014873	YTHDC2	100	80.498	Amphiprion_percula
ENSSLDG00000022840	YTHDC2	100	81.721	ENSATEG00000010847	YTHDC2	99	81.566	Anabas_testudineus
ENSSLDG00000022840	YTHDC2	83	69.111	ENSACAG00000007754	YTHDC2	98	65.563	Anolis_carolinensis
ENSSLDG00000022840	YTHDC2	98	63.584	ENSANAG00000022177	YTHDC2	97	63.923	Aotus_nancymaae
ENSSLDG00000022840	YTHDC2	99	76.420	ENSACLG00000019069	YTHDC2	99	76.297	Astatotilapia_calliptera
ENSSLDG00000022840	YTHDC2	99	67.277	ENSAMXG00000008735	YTHDC2	99	67.277	Astyanax_mexicanus
ENSSLDG00000022840	YTHDC2	98	66.930	ENSBTAG00000014099	YTHDC2	99	66.544	Bos_taurus
ENSSLDG00000022840	YTHDC2	98	64.158	ENSCJAG00000016598	YTHDC2	97	64.495	Callithrix_jacchus
ENSSLDG00000022840	YTHDC2	98	63.381	ENSCAFG00000000224	YTHDC2	97	71.326	Canis_familiaris
ENSSLDG00000022840	YTHDC2	98	66.287	ENSCAFG00020003668	YTHDC2	99	66.240	Canis_lupus_dingo
ENSSLDG00000022840	YTHDC2	98	66.427	ENSCHIG00000026651	YTHDC2	98	66.786	Capra_hircus
ENSSLDG00000022840	YTHDC2	97	66.184	ENSTSYG00000009634	YTHDC2	98	66.715	Carlito_syrichta
ENSSLDG00000022840	YTHDC2	75	55.823	ENSCAPG00000015691	YTHDC2	85	55.556	Cavia_aperea
ENSSLDG00000022840	YTHDC2	98	66.403	ENSCPOG00000000272	YTHDC2	97	66.858	Cavia_porcellus
ENSSLDG00000022840	YTHDC2	98	66.093	ENSCCAG00000037613	YTHDC2	97	66.428	Cebus_capucinus
ENSSLDG00000022840	YTHDC2	83	69.237	ENSCATG00000031670	YTHDC2	97	66.428	Cercocebus_atys
ENSSLDG00000022840	YTHDC2	98	65.741	ENSCLAG00000014076	YTHDC2	97	66.144	Chinchilla_lanigera
ENSSLDG00000022840	YTHDC2	83	69.409	ENSCSAG00000014899	YTHDC2	97	66.643	Chlorocebus_sabaeus
ENSSLDG00000022840	YTHDC2	84	70.085	ENSCHOG00000013323	YTHDC2	87	66.176	Choloepus_hoffmanni
ENSSLDG00000022840	YTHDC2	83	69.370	ENSCPBG00000013876	YTHDC2	98	65.912	Chrysemys_picta_bellii
ENSSLDG00000022840	YTHDC2	83	69.152	ENSCANG00000025759	YTHDC2	98	65.887	Colobus_angolensis_palliatus
ENSSLDG00000022840	YTHDC2	98	66.308	ENSCGRG00001021338	Ythdc2	97	66.643	Cricetulus_griseus_chok1gshd
ENSSLDG00000022840	YTHDC2	98	65.973	ENSCGRG00000010336	Ythdc2	97	66.308	Cricetulus_griseus_crigri
ENSSLDG00000022840	YTHDC2	87	58.737	ENSCSEG00000017911	YTHDC2	99	58.893	Cynoglossus_semilaevis
ENSSLDG00000022840	YTHDC2	99	71.871	ENSCVAG00000021377	YTHDC2	99	71.871	Cyprinodon_variegatus
ENSSLDG00000022840	YTHDC2	98	60.297	ENSDARG00000103525	YTHDC2	98	60.085	Danio_rerio
ENSSLDG00000022840	YTHDC2	98	65.068	ENSDNOG00000012198	YTHDC2	97	65.407	Dasypus_novemcinctus
ENSSLDG00000022840	YTHDC2	96	63.623	ENSDORG00000007057	Ythdc2	96	64.516	Dipodomys_ordii
ENSSLDG00000022840	YTHDC2	58	37.026	FBgn0030833	CG8915	81	37.026	Drosophila_melanogaster
ENSSLDG00000022840	YTHDC2	81	70.139	ENSETEG00000013681	YTHDC2	80	70.139	Echinops_telfairi
ENSSLDG00000022840	YTHDC2	89	52.202	ENSEBUG00000014315	-	86	53.119	Eptatretus_burgeri
ENSSLDG00000022840	YTHDC2	98	66.523	ENSEASG00005015135	YTHDC2	98	66.288	Equus_asinus_asinus
ENSSLDG00000022840	YTHDC2	98	67.027	ENSECAG00000020630	YTHDC2	92	75.641	Equus_caballus
ENSSLDG00000022840	YTHDC2	81	67.737	ENSEEUG00000008580	YTHDC2	81	67.737	Erinaceus_europaeus
ENSSLDG00000022840	YTHDC2	99	68.793	ENSELUG00000015902	YTHDC2	99	68.789	Esox_lucius
ENSSLDG00000022840	YTHDC2	98	66.237	ENSFCAG00000031967	YTHDC2	92	74.359	Felis_catus
ENSSLDG00000022840	YTHDC2	92	63.282	ENSFALG00000002623	-	99	63.616	Ficedula_albicollis
ENSSLDG00000022840	YTHDC2	96	63.469	ENSFALG00000000040	-	99	63.542	Ficedula_albicollis
ENSSLDG00000022840	YTHDC2	98	65.806	ENSFDAG00000008701	YTHDC2	99	66.475	Fukomys_damarensis
ENSSLDG00000022840	YTHDC2	99	76.636	ENSFHEG00000009312	YTHDC2	99	74.676	Fundulus_heteroclitus
ENSSLDG00000022840	YTHDC2	97	63.650	ENSGALG00000000189	YTHDC2	99	63.770	Gallus_gallus
ENSSLDG00000022840	YTHDC2	92	84.884	ENSGAFG00000008158	YTHDC2	99	84.884	Gambusia_affinis
ENSSLDG00000022840	YTHDC2	55	86.123	ENSGACG00000018569	YTHDC2	98	86.123	Gasterosteus_aculeatus
ENSSLDG00000022840	YTHDC2	81	69.054	ENSGAGG00000010063	YTHDC2	99	66.544	Gopherus_agassizii
ENSSLDG00000022840	YTHDC2	83	69.323	ENSGGOG00000014407	YTHDC2	97	66.500	Gorilla_gorilla
ENSSLDG00000022840	YTHDC2	84	78.043	ENSHBUG00000007492	YTHDC2	94	78.043	Haplochromis_burtoni
ENSSLDG00000022840	YTHDC2	98	65.976	ENSHGLG00000019014	YTHDC2	97	66.619	Heterocephalus_glaber_female
ENSSLDG00000022840	YTHDC2	98	65.976	ENSHGLG00100008192	YTHDC2	97	66.619	Heterocephalus_glaber_male
ENSSLDG00000022840	YTHDC2	98	66.376	ENSHCOG00000014281	YTHDC2	99	66.304	Hippocampus_comes
ENSSLDG00000022840	YTHDC2	99	66.175	ENSIPUG00000019561	ythdc2	98	66.385	Ictalurus_punctatus
ENSSLDG00000022840	YTHDC2	98	65.090	ENSSTOG00000013239	YTHDC2	98	64.965	Ictidomys_tridecemlineatus
ENSSLDG00000022840	YTHDC2	83	67.376	ENSJJAG00000017908	Ythdc2	97	64.815	Jaculus_jaculus
ENSSLDG00000022840	YTHDC2	99	77.754	ENSKMAG00000015969	YTHDC2	99	77.825	Kryptolebias_marmoratus
ENSSLDG00000022840	YTHDC2	99	78.129	ENSLBEG00000027926	YTHDC2	99	74.135	Labrus_bergylta
ENSSLDG00000022840	YTHDC2	99	65.046	ENSLACG00000010991	YTHDC2	99	65.771	Latimeria_chalumnae
ENSSLDG00000022840	YTHDC2	99	67.277	ENSLOCG00000009001	YTHDC2	99	66.947	Lepisosteus_oculatus
ENSSLDG00000022840	YTHDC2	89	67.009	ENSLAFG00000003538	YTHDC2	99	67.645	Loxodonta_africana
ENSSLDG00000022840	YTHDC2	83	69.409	ENSMNEG00000040900	YTHDC2	97	66.571	Macaca_nemestrina
ENSSLDG00000022840	YTHDC2	83	69.409	ENSMLEG00000043185	YTHDC2	97	66.571	Mandrillus_leucophaeus
ENSSLDG00000022840	YTHDC2	100	83.663	ENSMAMG00000019193	YTHDC2	100	83.439	Mastacembelus_armatus
ENSSLDG00000022840	YTHDC2	99	77.484	ENSMZEG00005009153	YTHDC2	99	77.484	Maylandia_zebra
ENSSLDG00000022840	YTHDC2	98	55.190	ENSMGAG00000006674	YTHDC2	97	60.511	Meleagris_gallopavo
ENSSLDG00000022840	YTHDC2	98	66.165	ENSMAUG00000016179	Ythdc2	96	66.571	Mesocricetus_auratus
ENSSLDG00000022840	YTHDC2	89	75.641	ENSMICG00000004030	YTHDC2	92	75.641	Microcebus_murinus
ENSSLDG00000022840	YTHDC2	98	66.093	ENSMOCG00000011740	Ythdc2	97	66.428	Microtus_ochrogaster
ENSSLDG00000022840	YTHDC2	89	76.244	ENSMMOG00000011758	YTHDC2	99	76.244	Mola_mola
ENSSLDG00000022840	YTHDC2	83	69.513	ENSMODG00000015671	YTHDC2	96	67.001	Monodelphis_domestica
ENSSLDG00000022840	YTHDC2	89	79.776	ENSMALG00000002782	YTHDC2	99	79.584	Monopterus_albus
ENSSLDG00000022840	YTHDC2	98	66.308	MGP_CAROLIEiJ_G0022248	Ythdc2	95	72.939	Mus_caroli
ENSSLDG00000022840	YTHDC2	98	66.308	ENSMUSG00000034653	Ythdc2	95	72.939	Mus_musculus
ENSSLDG00000022840	YTHDC2	98	66.237	MGP_PahariEiJ_G0018981	Ythdc2	95	72.939	Mus_pahari
ENSSLDG00000022840	YTHDC2	98	66.452	MGP_SPRETEiJ_G0023159	Ythdc2	95	72.939	Mus_spretus
ENSSLDG00000022840	YTHDC2	96	66.179	ENSMPUG00000000755	YTHDC2	98	66.716	Mustela_putorius_furo
ENSSLDG00000022840	YTHDC2	98	65.901	ENSMLUG00000006106	YTHDC2	98	65.767	Myotis_lucifugus
ENSSLDG00000022840	YTHDC2	84	69.277	ENSNGAG00000017798	Ythdc2	98	66.905	Nannospalax_galili
ENSSLDG00000022840	YTHDC2	99	71.632	ENSNBRG00000000762	YTHDC2	98	71.286	Neolamprologus_brichardi
ENSSLDG00000022840	YTHDC2	82	69.531	ENSNLEG00000011648	YTHDC2	97	66.428	Nomascus_leucogenys
ENSSLDG00000022840	YTHDC2	78	62.500	ENSMEUG00000004414	YTHDC2	77	62.500	Notamacropus_eugenii
ENSSLDG00000022840	YTHDC2	76	94.118	ENSOPRG00000000462	YTHDC2	76	94.118	Ochotona_princeps
ENSSLDG00000022840	YTHDC2	98	66.356	ENSODEG00000007804	YTHDC2	97	66.762	Octodon_degus
ENSSLDG00000022840	YTHDC2	98	77.348	ENSONIG00000011601	YTHDC2	99	77.348	Oreochromis_niloticus
ENSSLDG00000022840	YTHDC2	96	66.227	ENSOCUG00000012096	YTHDC2	99	66.765	Oryctolagus_cuniculus
ENSSLDG00000022840	YTHDC2	81	79.091	ENSORLG00000019098	YTHDC2	92	78.761	Oryzias_latipes
ENSSLDG00000022840	YTHDC2	99	64.651	ENSORLG00015000390	YTHDC2	99	64.651	Oryzias_latipes_hsok
ENSSLDG00000022840	YTHDC2	99	67.317	ENSOMEG00000014221	YTHDC2	99	66.931	Oryzias_melastigma
ENSSLDG00000022840	YTHDC2	98	66.308	ENSOGAG00000001618	YTHDC2	98	66.099	Otolemur_garnettii
ENSSLDG00000022840	YTHDC2	97	65.365	ENSOARG00000016223	YTHDC2	96	65.919	Ovis_aries
ENSSLDG00000022840	YTHDC2	83	69.237	ENSPPAG00000018854	YTHDC2	97	66.429	Pan_paniscus
ENSSLDG00000022840	YTHDC2	98	66.237	ENSPPRG00000001595	YTHDC2	98	66.571	Panthera_pardus
ENSSLDG00000022840	YTHDC2	96	65.788	ENSPTIG00000021801	YTHDC2	95	66.324	Panthera_tigris_altaica
ENSSLDG00000022840	YTHDC2	83	69.237	ENSPTRG00000017143	YTHDC2	97	66.429	Pan_troglodytes
ENSSLDG00000022840	YTHDC2	98	64.869	ENSPANG00000024470	YTHDC2	97	64.655	Papio_anubis
ENSSLDG00000022840	YTHDC2	99	66.076	ENSPKIG00000016010	YTHDC2	99	66.265	Paramormyrops_kingsleyae
ENSSLDG00000022840	YTHDC2	96	66.154	ENSPSIG00000014798	YTHDC2	99	66.691	Pelodiscus_sinensis
ENSSLDG00000022840	YTHDC2	53	72.988	ENSPMGG00000020677	YTHDC2	100	73.533	Periophthalmus_magnuspinnatus
ENSSLDG00000022840	YTHDC2	98	66.237	ENSPEMG00000018062	Ythdc2	97	66.643	Peromyscus_maniculatus_bairdii
ENSSLDG00000022840	YTHDC2	98	56.125	ENSPMAG00000003218	-	98	56.125	Petromyzon_marinus
ENSSLDG00000022840	YTHDC2	98	67.266	ENSPCIG00000004342	YTHDC2	98	67.073	Phascolarctos_cinereus
ENSSLDG00000022840	YTHDC2	100	74.082	ENSPFOG00000003895	YTHDC2	100	78.959	Poecilia_formosa
ENSSLDG00000022840	YTHDC2	100	78.174	ENSPLAG00000007558	YTHDC2	100	78.016	Poecilia_latipinna
ENSSLDG00000022840	YTHDC2	100	78.388	ENSPMEG00000015205	YTHDC2	100	79.139	Poecilia_mexicana
ENSSLDG00000022840	YTHDC2	100	77.675	ENSPREG00000012096	YTHDC2	99	77.516	Poecilia_reticulata
ENSSLDG00000022840	YTHDC2	83	68.606	ENSPPYG00000015691	YTHDC2	97	65.904	Pongo_abelii
ENSSLDG00000022840	YTHDC2	88	58.352	ENSPCAG00000007733	YTHDC2	88	58.388	Procavia_capensis
ENSSLDG00000022840	YTHDC2	98	59.211	ENSPCOG00000017526	YTHDC2	97	59.685	Propithecus_coquereli
ENSSLDG00000022840	YTHDC2	88	70.139	ENSPVAG00000012364	YTHDC2	86	70.139	Pteropus_vampyrus
ENSSLDG00000022840	YTHDC2	99	75.324	ENSPNYG00000006908	YTHDC2	99	75.324	Pundamilia_nyererei
ENSSLDG00000022840	YTHDC2	99	68.403	ENSPNAG00000010128	YTHDC2	99	68.759	Pygocentrus_nattereri
ENSSLDG00000022840	YTHDC2	84	68.136	ENSRNOG00000039241	Ythdc2	93	67.758	Rattus_norvegicus
ENSSLDG00000022840	YTHDC2	83	67.091	ENSRBIG00000040291	YTHDC2	97	64.656	Rhinopithecus_bieti
ENSSLDG00000022840	YTHDC2	83	69.323	ENSRROG00000039477	YTHDC2	97	66.500	Rhinopithecus_roxellana
ENSSLDG00000022840	YTHDC2	98	66.093	ENSSBOG00000023829	YTHDC2	97	66.428	Saimiri_boliviensis_boliviensis
ENSSLDG00000022840	YTHDC2	83	69.666	ENSSHAG00000003101	YTHDC2	98	67.001	Sarcophilus_harrisii
ENSSLDG00000022840	YTHDC2	98	63.525	ENSSFOG00015003572	ythdc2	99	63.545	Scleropages_formosus
ENSSLDG00000022840	YTHDC2	87	63.940	ENSSMAG00000011225	YTHDC2	98	63.940	Scophthalmus_maximus
ENSSLDG00000022840	YTHDC2	100	97.125	ENSSDUG00000021389	YTHDC2	100	97.125	Seriola_dumerili
ENSSLDG00000022840	YTHDC2	83	75.758	ENSSARG00000000924	YTHDC2	85	70.833	Sorex_araneus
ENSSLDG00000022840	YTHDC2	51	67.373	ENSSPUG00000015912	-	98	67.083	Sphenodon_punctatus
ENSSLDG00000022840	YTHDC2	99	79.286	ENSSPAG00000014889	YTHDC2	99	79.286	Stegastes_partitus
ENSSLDG00000022840	YTHDC2	98	66.452	ENSSSCG00000014211	YTHDC2	99	66.489	Sus_scrofa
ENSSLDG00000022840	YTHDC2	93	63.671	ENSTGUG00000003755	-	99	63.746	Taeniopygia_guttata
ENSSLDG00000022840	YTHDC2	70	61.747	ENSTGUG00000014992	-	93	64.693	Taeniopygia_guttata
ENSSLDG00000022840	YTHDC2	98	69.281	ENSTRUG00000006717	YTHDC2	99	69.208	Takifugu_rubripes
ENSSLDG00000022840	YTHDC2	94	69.398	ENSTNIG00000003707	YTHDC2	99	69.398	Tetraodon_nigroviridis
ENSSLDG00000022840	YTHDC2	85	63.519	ENSTBEG00000006872	YTHDC2	88	64.183	Tupaia_belangeri
ENSSLDG00000022840	YTHDC2	84	69.863	ENSTTRG00000003116	YTHDC2	82	69.863	Tursiops_truncatus
ENSSLDG00000022840	YTHDC2	75	70.504	ENSUAMG00000003688	YTHDC2	97	70.227	Ursus_americanus
ENSSLDG00000022840	YTHDC2	96	66.084	ENSUMAG00000023877	YTHDC2	99	66.618	Ursus_maritimus
ENSSLDG00000022840	YTHDC2	98	60.272	ENSVPAG00000007516	YTHDC2	98	59.816	Vicugna_pacos
ENSSLDG00000022840	YTHDC2	98	66.380	ENSVVUG00000000281	YTHDC2	92	74.359	Vulpes_vulpes
ENSSLDG00000022840	YTHDC2	98	61.127	ENSXETG00000021517	ythdc2	98	61.056	Xenopus_tropicalis
ENSSLDG00000022840	YTHDC2	100	74.642	ENSXCOG00000016406	YTHDC2	100	74.156	Xiphophorus_couchianus
ENSSLDG00000022840	YTHDC2	100	78.174	ENSXMAG00000007618	YTHDC2	100	78.016	Xiphophorus_maculatus