EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000022841 (Gene tree)
Gene ID: -
Gene Symbol: srsf6a
Alias: fa12h12|sfrs6a|wu:fa12h12|wu:fa13e06|zgc:63770
Full Name: serine/arginine-rich splicing factor 6-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 3623 bases
Position: chrPEQF01099340.1:45703-49325
Accession: 111670719
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000029666	RRM_1	PF00076.22	4.6e-32	1	2
ENSSLDP00000029666	RRM_1	PF00076.22	4.6e-32	2	2
ENSSLDP00000029683	RRM_1	PF00076.22	1.8e-31	1	2
ENSSLDP00000029683	RRM_1	PF00076.22	1.8e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000030545	-	951	-	ENSSLDP00000029683	316 (aa)	-	-
ENSSLDT00000030527	-	1044	XM_023427565	ENSSLDP00000029666	347 (aa)	XP_023283333	-

Gene Model

Click here to download ENSSLDG00000022841's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000022841's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000022841	srsf6a	53	62.903	ENSSLDG00000009745	srsf4	60	70.779
ENSSLDG00000022841	srsf6a	57	37.500	ENSSLDG00000016868	-	81	34.404
ENSSLDG00000022841	srsf6a	52	63.536	ENSSLDG00000004146	srsf5a	61	64.641
ENSSLDG00000022841	srsf6a	52	41.753	ENSSLDG00000012305	srsf9	73	40.933
ENSSLDG00000022841	srsf6a	52	63.889	ENSSLDG00000023255	srsf5b	82	61.290

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000022841	srsf6a	54	87.634	ENSG00000124193	SRSF6	98	61.871	Homo_sapiens
ENSSLDG00000022841	srsf6a	61	79.630	ENSAPOG00000000810	srsf6a	92	77.419	Acanthochromis_polyacanthus
ENSSLDG00000022841	srsf6a	54	70.588	ENSAMEG00000003710	SRSF6	53	71.505	Ailuropoda_melanoleuca
ENSSLDG00000022841	srsf6a	71	76.800	ENSACIG00000020091	-	95	83.721	Amphilophus_citrinellus
ENSSLDG00000022841	srsf6a	93	80.805	ENSACIG00000023658	-	75	95.028	Amphilophus_citrinellus
ENSSLDG00000022841	srsf6a	80	70.397	ENSAOCG00000004309	-	57	87.027	Amphiprion_ocellaris
ENSSLDG00000022841	srsf6a	94	85.321	ENSAPEG00000013086	-	91	75.785	Amphiprion_percula
ENSSLDG00000022841	srsf6a	55	82.653	ENSAPEG00000020746	-	65	83.158	Amphiprion_percula
ENSSLDG00000022841	srsf6a	53	85.326	ENSATEG00000007255	-	71	82.065	Anabas_testudineus
ENSSLDG00000022841	srsf6a	71	74.439	ENSATEG00000010679	-	79	85.268	Anabas_testudineus
ENSSLDG00000022841	srsf6a	57	85.427	ENSACAG00000002061	SRSF6	52	88.108	Anolis_carolinensis
ENSSLDG00000022841	srsf6a	54	87.634	ENSANAG00000024080	SRSF6	98	61.871	Aotus_nancymaae
ENSSLDG00000022841	srsf6a	53	90.323	ENSAMXG00000003101	-	73	77.297	Astyanax_mexicanus
ENSSLDG00000022841	srsf6a	53	86.022	ENSAMXG00000042692	-	96	88.889	Astyanax_mexicanus
ENSSLDG00000022841	srsf6a	54	87.634	ENSBTAG00000008527	SRSF6	98	62.590	Bos_taurus
ENSSLDG00000022841	srsf6a	64	76.211	ENSCJAG00000048403	SRSF6	98	61.871	Callithrix_jacchus
ENSSLDG00000022841	srsf6a	54	87.634	ENSCAFG00000009289	SRSF6	98	62.590	Canis_familiaris
ENSSLDG00000022841	srsf6a	54	87.634	ENSCAFG00020013559	SRSF6	98	62.590	Canis_lupus_dingo
ENSSLDG00000022841	srsf6a	54	86.559	ENSCHIG00000009148	-	53	87.027	Capra_hircus
ENSSLDG00000022841	srsf6a	54	87.634	ENSCHIG00000015890	-	98	62.590	Capra_hircus
ENSSLDG00000022841	srsf6a	54	82.258	ENSCPOG00000011761	SRSF6	98	61.871	Cavia_porcellus
ENSSLDG00000022841	srsf6a	54	87.634	ENSCCAG00000026018	-	98	61.871	Cebus_capucinus
ENSSLDG00000022841	srsf6a	54	76.471	ENSCCAG00000018540	-	60	76.344	Cebus_capucinus
ENSSLDG00000022841	srsf6a	54	87.634	ENSCATG00000030794	SRSF6	98	61.871	Cercocebus_atys
ENSSLDG00000022841	srsf6a	54	87.634	ENSCLAG00000010247	SRSF6	98	61.871	Chinchilla_lanigera
ENSSLDG00000022841	srsf6a	54	87.634	ENSCSAG00000014022	SRSF6	53	88.108	Chlorocebus_sabaeus
ENSSLDG00000022841	srsf6a	59	72.428	ENSCPBG00000018200	SRSF6	54	89.247	Chrysemys_picta_bellii
ENSSLDG00000022841	srsf6a	54	86.559	ENSCANG00000037774	-	53	87.027	Colobus_angolensis_palliatus
ENSSLDG00000022841	srsf6a	54	87.634	ENSCGRG00001022339	Srsf6	98	61.871	Cricetulus_griseus_chok1gshd
ENSSLDG00000022841	srsf6a	53	89.305	ENSDARG00000016783	srsf6b	82	96.154	Danio_rerio
ENSSLDG00000022841	srsf6a	54	87.634	ENSDNOG00000008410	SRSF6	53	88.108	Dasypus_novemcinctus
ENSSLDG00000022841	srsf6a	54	87.634	ENSDORG00000028378	Srsf6	98	61.871	Dipodomys_ordii
ENSSLDG00000022841	srsf6a	54	83.871	ENSETEG00000006221	SRSF6	53	84.324	Echinops_telfairi
ENSSLDG00000022841	srsf6a	54	87.634	ENSEASG00005023429	SRSF6	53	88.108	Equus_asinus_asinus
ENSSLDG00000022841	srsf6a	54	87.634	ENSECAG00000023932	SRSF6	56	88.108	Equus_caballus
ENSSLDG00000022841	srsf6a	94	76.758	ENSELUG00000013506	SRSF6	96	77.439	Esox_lucius
ENSSLDG00000022841	srsf6a	71	73.896	ENSELUG00000024182	SRSF6	90	87.805	Esox_lucius
ENSSLDG00000022841	srsf6a	54	87.634	ENSFCAG00000032814	SRSF6	53	88.108	Felis_catus
ENSSLDG00000022841	srsf6a	94	80.909	ENSFHEG00000023065	srsf6a	93	77.538	Fundulus_heteroclitus
ENSSLDG00000022841	srsf6a	52	74.586	ENSGMOG00000006105	srsf6a	62	73.481	Gadus_morhua
ENSSLDG00000022841	srsf6a	53	85.792	ENSGMOG00000014458	srsf6a	51	84.211	Gadus_morhua
ENSSLDG00000022841	srsf6a	53	87.701	ENSGALG00000000990	SRSF6	98	59.441	Gallus_gallus
ENSSLDG00000022841	srsf6a	61	75.000	ENSGAFG00000019087	srsf6a	91	74.107	Gambusia_affinis
ENSSLDG00000022841	srsf6a	94	76.149	ENSGACG00000006084	srsf6a	95	61.377	Gasterosteus_aculeatus
ENSSLDG00000022841	srsf6a	59	72.428	ENSGAGG00000003238	SRSF6	54	89.247	Gopherus_agassizii
ENSSLDG00000022841	srsf6a	54	87.634	ENSGGOG00000009808	SRSF6	98	61.871	Gorilla_gorilla
ENSSLDG00000022841	srsf6a	100	62.242	ENSHBUG00000006386	-	98	59.877	Haplochromis_burtoni
ENSSLDG00000022841	srsf6a	54	87.634	ENSHGLG00000007348	SRSF6	98	61.871	Heterocephalus_glaber_female
ENSSLDG00000022841	srsf6a	56	68.718	ENSHGLG00000007701	-	57	67.568	Heterocephalus_glaber_female
ENSSLDG00000022841	srsf6a	92	67.712	ENSHCOG00000002740	srsf6a	57	87.027	Hippocampus_comes
ENSSLDG00000022841	srsf6a	53	87.097	ENSIPUG00000004776	-	92	56.426	Ictalurus_punctatus
ENSSLDG00000022841	srsf6a	54	87.634	ENSSTOG00000010866	SRSF6	98	61.871	Ictidomys_tridecemlineatus
ENSSLDG00000022841	srsf6a	94	74.434	ENSKMAG00000011934	srsf6a	91	76.606	Kryptolebias_marmoratus
ENSSLDG00000022841	srsf6a	93	82.090	ENSLBEG00000007356	srsf6a	51	94.565	Labrus_bergylta
ENSSLDG00000022841	srsf6a	54	87.634	ENSMFAG00000036925	SRSF6	98	61.871	Macaca_fascicularis
ENSSLDG00000022841	srsf6a	54	87.634	ENSMMUG00000006742	SRSF6	98	61.871	Macaca_mulatta
ENSSLDG00000022841	srsf6a	54	87.097	ENSMNEG00000038270	-	53	87.568	Macaca_nemestrina
ENSSLDG00000022841	srsf6a	54	87.097	ENSMNEG00000027392	-	98	61.151	Macaca_nemestrina
ENSSLDG00000022841	srsf6a	94	97.239	ENSMAMG00000017161	srsf6a	94	97.248	Mastacembelus_armatus
ENSSLDG00000022841	srsf6a	97	65.179	ENSMZEG00005008032	-	57	86.486	Maylandia_zebra
ENSSLDG00000022841	srsf6a	77	70.522	ENSMZEG00005020658	-	60	86.885	Maylandia_zebra
ENSSLDG00000022841	srsf6a	54	87.097	ENSMICG00000008537	SRSF6	98	61.871	Microcebus_murinus
ENSSLDG00000022841	srsf6a	54	86.559	ENSMODG00000003107	SRSF6	54	88.108	Monodelphis_domestica
ENSSLDG00000022841	srsf6a	93	69.275	ENSMALG00000003702	srsf6a	100	72.980	Monopterus_albus
ENSSLDG00000022841	srsf6a	54	87.634	MGP_CAROLIEiJ_G0024606	Srsf6	98	61.871	Mus_caroli
ENSSLDG00000022841	srsf6a	54	87.634	ENSMUSG00000016921	Srsf6	98	61.871	Mus_musculus
ENSSLDG00000022841	srsf6a	54	87.634	MGP_PahariEiJ_G0026050	Srsf6	98	61.871	Mus_pahari
ENSSLDG00000022841	srsf6a	54	87.634	MGP_SPRETEiJ_G0025528	Srsf6	98	61.871	Mus_spretus
ENSSLDG00000022841	srsf6a	54	87.634	ENSMPUG00000017692	SRSF6	64	88.108	Mustela_putorius_furo
ENSSLDG00000022841	srsf6a	50	66.129	ENSMLUG00000016618	SRSF6	52	65.574	Myotis_lucifugus
ENSSLDG00000022841	srsf6a	54	87.634	ENSNGAG00000017560	Srsf6	98	61.871	Nannospalax_galili
ENSSLDG00000022841	srsf6a	53	85.946	ENSNBRG00000014709	-	98	59.877	Neolamprologus_brichardi
ENSSLDG00000022841	srsf6a	93	76.852	ENSNBRG00000001846	-	91	85.627	Neolamprologus_brichardi
ENSSLDG00000022841	srsf6a	54	87.634	ENSNLEG00000006524	SRSF6	98	61.871	Nomascus_leucogenys
ENSSLDG00000022841	srsf6a	50	76.757	ENSMEUG00000014615	SRSF6	61	88.108	Notamacropus_eugenii
ENSSLDG00000022841	srsf6a	53	85.946	ENSONIG00000020247	-	98	60.882	Oreochromis_niloticus
ENSSLDG00000022841	srsf6a	97	76.923	ENSONIG00000001925	-	88	77.538	Oreochromis_niloticus
ENSSLDG00000022841	srsf6a	64	61.441	ENSOCUG00000009785	-	63	68.750	Oryctolagus_cuniculus
ENSSLDG00000022841	srsf6a	52	52.486	ENSOCUG00000023999	-	70	57.233	Oryctolagus_cuniculus
ENSSLDG00000022841	srsf6a	50	87.898	ENSOMEG00000006001	srsf6a	62	75.439	Oryzias_melastigma
ENSSLDG00000022841	srsf6a	54	87.097	ENSOGAG00000014468	SRSF6	53	87.568	Otolemur_garnettii
ENSSLDG00000022841	srsf6a	54	80.729	ENSOARG00000003117	SRSF6	53	84.324	Ovis_aries
ENSSLDG00000022841	srsf6a	68	62.869	ENSPPAG00000043131	-	57	72.487	Pan_paniscus
ENSSLDG00000022841	srsf6a	54	87.097	ENSPPAG00000034327	-	53	87.568	Pan_paniscus
ENSSLDG00000022841	srsf6a	54	87.634	ENSPPRG00000008917	SRSF6	53	88.108	Panthera_pardus
ENSSLDG00000022841	srsf6a	68	62.869	ENSPTRG00000046274	-	57	72.487	Pan_troglodytes
ENSSLDG00000022841	srsf6a	54	87.634	ENSPTRG00000044686	-	98	61.871	Pan_troglodytes
ENSSLDG00000022841	srsf6a	54	87.634	ENSPANG00000035224	SRSF6	98	61.871	Papio_anubis
ENSSLDG00000022841	srsf6a	52	73.370	ENSPKIG00000015703	-	95	60.927	Paramormyrops_kingsleyae
ENSSLDG00000022841	srsf6a	100	76.075	ENSPKIG00000018463	-	77	94.872	Paramormyrops_kingsleyae
ENSSLDG00000022841	srsf6a	94	78.593	ENSPMGG00000014963	srsf6a	55	97.838	Periophthalmus_magnuspinnatus
ENSSLDG00000022841	srsf6a	54	86.559	ENSPCIG00000003820	SRSF6	98	61.871	Phascolarctos_cinereus
ENSSLDG00000022841	srsf6a	94	74.857	ENSPFOG00000006437	srsf6a	94	74.373	Poecilia_formosa
ENSSLDG00000022841	srsf6a	94	82.822	ENSPLAG00000009243	srsf6a	79	96.032	Poecilia_latipinna
ENSSLDG00000022841	srsf6a	61	73.500	ENSPMEG00000006056	SRSF6	89	73.500	Poecilia_mexicana
ENSSLDG00000022841	srsf6a	94	82.282	ENSPMEG00000006042	SRSF6	94	76.364	Poecilia_mexicana
ENSSLDG00000022841	srsf6a	54	87.634	ENSPPYG00000011019	SRSF6	53	88.108	Pongo_abelii
ENSSLDG00000022841	srsf6a	54	86.022	ENSPCAG00000010954	SRSF6	55	86.486	Procavia_capensis
ENSSLDG00000022841	srsf6a	54	87.097	ENSPCOG00000026364	SRSF6	98	61.871	Propithecus_coquereli
ENSSLDG00000022841	srsf6a	54	87.097	ENSPVAG00000015232	SRSF6	53	88.043	Pteropus_vampyrus
ENSSLDG00000022841	srsf6a	100	64.265	ENSPNYG00000004944	-	98	59.877	Pundamilia_nyererei
ENSSLDG00000022841	srsf6a	94	89.264	ENSPNYG00000011272	-	90	89.297	Pundamilia_nyererei
ENSSLDG00000022841	srsf6a	54	87.634	ENSRNOG00000006380	Srsf6	54	88.108	Rattus_norvegicus
ENSSLDG00000022841	srsf6a	54	86.559	ENSRBIG00000041414	SRSF6	98	60.432	Rhinopithecus_bieti
ENSSLDG00000022841	srsf6a	54	87.634	ENSRROG00000029989	SRSF6	98	61.871	Rhinopithecus_roxellana
ENSSLDG00000022841	srsf6a	54	87.634	ENSSBOG00000033708	-	98	61.871	Saimiri_boliviensis_boliviensis
ENSSLDG00000022841	srsf6a	54	86.559	ENSSHAG00000012805	SRSF6	54	88.108	Sarcophilus_harrisii
ENSSLDG00000022841	srsf6a	93	71.605	ENSSFOG00015015169	SRSF6	59	92.973	Scleropages_formosus
ENSSLDG00000022841	srsf6a	94	71.387	ENSSFOG00015019681	-	68	80.702	Scleropages_formosus
ENSSLDG00000022841	srsf6a	74	74.576	ENSSMAG00000014819	-	83	72.768	Scophthalmus_maximus
ENSSLDG00000022841	srsf6a	68	76.667	ENSSMAG00000017447	-	92	62.379	Scophthalmus_maximus
ENSSLDG00000022841	srsf6a	100	98.854	ENSSDUG00000016097	srsf6a	100	98.854	Seriola_dumerili
ENSSLDG00000022841	srsf6a	53	89.189	ENSSPUG00000004967	SRSF6	98	59.441	Sphenodon_punctatus
ENSSLDG00000022841	srsf6a	91	90.741	ENSSPAG00000002362	srsf6a	87	97.872	Stegastes_partitus
ENSSLDG00000022841	srsf6a	54	87.634	ENSSSCG00000007362	SRSF6	61	88.108	Sus_scrofa
ENSSLDG00000022841	srsf6a	53	88.108	ENSTGUG00000003455	SRSF6	53	88.649	Taeniopygia_guttata
ENSSLDG00000022841	srsf6a	93	76.780	ENSTNIG00000001692	srsf6a	56	94.595	Tetraodon_nigroviridis
ENSSLDG00000022841	srsf6a	54	87.634	ENSUAMG00000003559	SRSF6	98	62.590	Ursus_americanus
ENSSLDG00000022841	srsf6a	94	79.880	ENSXMAG00000021849	srsf6a	93	75.229	Xiphophorus_maculatus