EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000022850 (Gene tree)
Gene ID: -
Gene Symbol: pus1
Alias: wu:fb98h11|zgc:103516
Full Name: pseudouridine synthase 1
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 2567 bases
Position: chrPEQF01098612.1:352124-354690
Accession: 111652976
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000029618	PseudoU_synth_1	PF01416.20	6.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000030477	-	1750	XM_023403402	ENSSLDP00000029618	421 (aa)	XP_023259170	UPI000C6FB2A4

Gene Model

Click here to download ENSSLDG00000022850's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000022850's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000022850	pus1	86	68.698	ENSG00000177192	PUS1	88	71.176	Homo_sapiens
ENSSLDG00000022850	pus1	100	83.610	ENSAPOG00000007254	pus1	100	83.610	Acanthochromis_polyacanthus
ENSSLDG00000022850	pus1	89	65.241	ENSAMEG00000013715	PUS1	89	65.241	Ailuropoda_melanoleuca
ENSSLDG00000022850	pus1	95	85.464	ENSACIG00000009169	pus1	96	85.464	Amphilophus_citrinellus
ENSSLDG00000022850	pus1	100	82.660	ENSAOCG00000022207	pus1	100	82.660	Amphiprion_ocellaris
ENSSLDG00000022850	pus1	100	82.423	ENSAPEG00000006039	pus1	99	86.189	Amphiprion_percula
ENSSLDG00000022850	pus1	93	86.957	ENSATEG00000020688	pus1	100	86.957	Anabas_testudineus
ENSSLDG00000022850	pus1	84	69.638	ENSACAG00000007367	PUS1	96	69.638	Anolis_carolinensis
ENSSLDG00000022850	pus1	77	67.593	ENSANAG00000036192	PUS1	99	67.593	Aotus_nancymaae
ENSSLDG00000022850	pus1	100	84.798	ENSACLG00000020868	pus1	100	87.724	Astatotilapia_calliptera
ENSSLDG00000022850	pus1	99	67.681	ENSAMXG00000008710	pus1	97	67.681	Astyanax_mexicanus
ENSSLDG00000022850	pus1	89	66.043	ENSBTAG00000012990	PUS1	91	66.043	Bos_taurus
ENSSLDG00000022850	pus1	85	38.441	WBGene00004248	pus-1	87	37.568	Caenorhabditis_elegans
ENSSLDG00000022850	pus1	60	68.504	ENSCJAG00000003720	PUS1	72	66.917	Callithrix_jacchus
ENSSLDG00000022850	pus1	89	65.691	ENSCAFG00000006429	PUS1	88	68.451	Canis_familiaris
ENSSLDG00000022850	pus1	84	68.451	ENSCAFG00020010737	PUS1	81	68.451	Canis_lupus_dingo
ENSSLDG00000022850	pus1	93	63.728	ENSCHIG00000000487	PUS1	91	66.310	Capra_hircus
ENSSLDG00000022850	pus1	87	67.213	ENSTSYG00000032605	PUS1	98	68.033	Carlito_syrichta
ENSSLDG00000022850	pus1	71	71.906	ENSCAPG00000006421	PUS1	94	71.947	Cavia_aperea
ENSSLDG00000022850	pus1	86	66.667	ENSCPOG00000001027	PUS1	99	60.706	Cavia_porcellus
ENSSLDG00000022850	pus1	80	69.940	ENSCCAG00000015879	PUS1	90	67.791	Cebus_capucinus
ENSSLDG00000022850	pus1	86	67.867	ENSCATG00000032870	PUS1	89	68.405	Cercocebus_atys
ENSSLDG00000022850	pus1	99	61.190	ENSCLAG00000011689	PUS1	99	61.190	Chinchilla_lanigera
ENSSLDG00000022850	pus1	86	68.144	ENSCSAG00000001879	PUS1	84	68.144	Chlorocebus_sabaeus
ENSSLDG00000022850	pus1	75	71.975	ENSCPBG00000024715	PUS1	93	69.725	Chrysemys_picta_bellii
ENSSLDG00000022850	pus1	81	44.023	ENSCING00000009426	-	91	44.023	Ciona_intestinalis
ENSSLDG00000022850	pus1	84	41.011	ENSCSAVG00000003751	-	73	41.011	Ciona_savignyi
ENSSLDG00000022850	pus1	86	60.388	ENSCANG00000035561	PUS1	89	62.006	Colobus_angolensis_palliatus
ENSSLDG00000022850	pus1	87	67.480	ENSCGRG00001019592	Pus1	86	67.480	Cricetulus_griseus_chok1gshd
ENSSLDG00000022850	pus1	87	67.480	ENSCGRG00000004048	Pus1	92	67.480	Cricetulus_griseus_crigri
ENSSLDG00000022850	pus1	100	76.247	ENSCSEG00000003629	pus1	100	76.247	Cynoglossus_semilaevis
ENSSLDG00000022850	pus1	100	81.473	ENSCVAG00000001265	pus1	100	81.473	Cyprinodon_variegatus
ENSSLDG00000022850	pus1	94	68.861	ENSDARG00000045562	pus1	97	76.471	Danio_rerio
ENSSLDG00000022850	pus1	95	61.728	ENSDNOG00000045576	PUS1	98	69.159	Dasypus_novemcinctus
ENSSLDG00000022850	pus1	77	68.827	ENSDORG00000011455	Pus1	99	68.827	Dipodomys_ordii
ENSSLDG00000022850	pus1	80	45.690	FBgn0038811	PUS1	83	45.690	Drosophila_melanogaster
ENSSLDG00000022850	pus1	87	66.129	ENSETEG00000019160	PUS1	89	66.488	Echinops_telfairi
ENSSLDG00000022850	pus1	79	43.820	ENSEBUG00000000368	-	67	42.308	Eptatretus_burgeri
ENSSLDG00000022850	pus1	82	69.653	ENSEASG00005016535	PUS1	80	69.653	Equus_asinus_asinus
ENSSLDG00000022850	pus1	82	69.653	ENSECAG00000006965	PUS1	87	69.653	Equus_caballus
ENSSLDG00000022850	pus1	93	76.215	ENSELUG00000010424	pus1	99	76.215	Esox_lucius
ENSSLDG00000022850	pus1	86	67.493	ENSFCAG00000010780	PUS1	84	67.493	Felis_catus
ENSSLDG00000022850	pus1	91	66.329	ENSFALG00000008273	PUS1	92	66.582	Ficedula_albicollis
ENSSLDG00000022850	pus1	86	67.867	ENSFDAG00000012518	PUS1	87	67.867	Fukomys_damarensis
ENSSLDG00000022850	pus1	100	81.455	ENSFHEG00000010504	pus1	100	81.455	Fundulus_heteroclitus
ENSSLDG00000022850	pus1	93	74.046	ENSGMOG00000008143	pus1	99	74.046	Gadus_morhua
ENSSLDG00000022850	pus1	90	66.579	ENSGALG00000002354	PUS1	93	66.579	Gallus_gallus
ENSSLDG00000022850	pus1	100	82.898	ENSGAFG00000006578	pus1	100	82.898	Gambusia_affinis
ENSSLDG00000022850	pus1	100	80.615	ENSGACG00000017566	pus1	99	83.969	Gasterosteus_aculeatus
ENSSLDG00000022850	pus1	78	69.301	ENSGAGG00000016730	-	94	69.301	Gopherus_agassizii
ENSSLDG00000022850	pus1	86	68.889	ENSGGOG00000009178	PUS1	87	69.632	Gorilla_gorilla
ENSSLDG00000022850	pus1	100	85.036	ENSHBUG00000001316	pus1	100	87.980	Haplochromis_burtoni
ENSSLDG00000022850	pus1	68	30.063	ENSHGLG00000015753	-	81	30.063	Heterocephalus_glaber_female
ENSSLDG00000022850	pus1	86	66.389	ENSHGLG00000016086	PUS1	91	66.389	Heterocephalus_glaber_female
ENSSLDG00000022850	pus1	86	66.111	ENSHGLG00100019362	PUS1	91	66.111	Heterocephalus_glaber_male
ENSSLDG00000022850	pus1	100	74.822	ENSHCOG00000014288	pus1	96	74.822	Hippocampus_comes
ENSSLDG00000022850	pus1	95	71.111	ENSIPUG00000010387	pus1	91	75.749	Ictalurus_punctatus
ENSSLDG00000022850	pus1	78	71.772	ENSSTOG00000011245	PUS1	83	68.644	Ictidomys_tridecemlineatus
ENSSLDG00000022850	pus1	87	66.393	ENSJJAG00000000088	Pus1	86	66.393	Jaculus_jaculus
ENSSLDG00000022850	pus1	96	77.641	ENSKMAG00000012702	pus1	96	77.641	Kryptolebias_marmoratus
ENSSLDG00000022850	pus1	95	82.294	ENSLBEG00000002845	pus1	98	82.294	Labrus_bergylta
ENSSLDG00000022850	pus1	86	66.298	ENSLACG00000018598	PUS1	94	64.380	Latimeria_chalumnae
ENSSLDG00000022850	pus1	76	57.143	ENSLACG00000016044	-	97	57.143	Latimeria_chalumnae
ENSSLDG00000022850	pus1	90	68.684	ENSLOCG00000006127	pus1	96	68.684	Lepisosteus_oculatus
ENSSLDG00000022850	pus1	83	68.362	ENSLAFG00000028731	PUS1	94	67.705	Loxodonta_africana
ENSSLDG00000022850	pus1	86	68.144	ENSMFAG00000041194	PUS1	89	68.712	Macaca_fascicularis
ENSSLDG00000022850	pus1	81	70.882	ENSMMUG00000031463	PUS1	87	71.803	Macaca_mulatta
ENSSLDG00000022850	pus1	86	68.144	ENSMNEG00000002814	PUS1	89	68.712	Macaca_nemestrina
ENSSLDG00000022850	pus1	77	68.827	ENSMLEG00000043560	PUS1	99	68.827	Mandrillus_leucophaeus
ENSSLDG00000022850	pus1	100	82.185	ENSMAMG00000007371	pus1	100	82.185	Mastacembelus_armatus
ENSSLDG00000022850	pus1	100	84.798	ENSMZEG00005017746	pus1	100	84.798	Maylandia_zebra
ENSSLDG00000022850	pus1	77	71.207	ENSMGAG00000001958	PUS1	98	71.207	Meleagris_gallopavo
ENSSLDG00000022850	pus1	87	68.306	ENSMAUG00000001482	Pus1	86	68.306	Mesocricetus_auratus
ENSSLDG00000022850	pus1	89	66.223	ENSMICG00000030980	PUS1	91	66.223	Microcebus_murinus
ENSSLDG00000022850	pus1	83	69.143	ENSMOCG00000022311	Pus1	83	68.927	Microtus_ochrogaster
ENSSLDG00000022850	pus1	93	79.028	ENSMMOG00000021022	pus1	99	79.028	Mola_mola
ENSSLDG00000022850	pus1	81	67.055	ENSMODG00000015551	PUS1	80	65.460	Monodelphis_domestica
ENSSLDG00000022850	pus1	99	81.429	ENSMALG00000013202	pus1	99	81.429	Monopterus_albus
ENSSLDG00000022850	pus1	89	67.024	MGP_CAROLIEiJ_G0027551	Pus1	92	68.033	Mus_caroli
ENSSLDG00000022850	pus1	89	67.024	ENSMUSG00000029507	Pus1	92	68.033	Mus_musculus
ENSSLDG00000022850	pus1	87	68.033	MGP_PahariEiJ_G0024133	Pus1	92	68.033	Mus_pahari
ENSSLDG00000022850	pus1	89	67.024	MGP_SPRETEiJ_G0028549	Pus1	92	68.033	Mus_spretus
ENSSLDG00000022850	pus1	81	70.468	ENSMPUG00000002314	PUS1	86	70.468	Mustela_putorius_furo
ENSSLDG00000022850	pus1	86	66.575	ENSMLUG00000015790	PUS1	99	66.575	Myotis_lucifugus
ENSSLDG00000022850	pus1	62	30.375	ENSNGAG00000013868	Pus3	56	30.375	Nannospalax_galili
ENSSLDG00000022850	pus1	81	71.681	ENSNGAG00000012976	Pus1	80	71.681	Nannospalax_galili
ENSSLDG00000022850	pus1	93	87.468	ENSNBRG00000020502	pus1	99	88.770	Neolamprologus_brichardi
ENSSLDG00000022850	pus1	86	66.759	ENSNLEG00000008505	PUS1	99	69.206	Nomascus_leucogenys
ENSSLDG00000022850	pus1	81	61.404	ENSMEUG00000002825	PUS1	92	61.404	Notamacropus_eugenii
ENSSLDG00000022850	pus1	78	62.385	ENSOPRG00000002701	-	86	62.385	Ochotona_princeps
ENSSLDG00000022850	pus1	89	66.043	ENSODEG00000008248	PUS1	96	67.123	Octodon_degus
ENSSLDG00000022850	pus1	93	86.650	ENSONIG00000003803	pus1	100	86.650	Oreochromis_niloticus
ENSSLDG00000022850	pus1	94	63.433	ENSOANG00000010619	PUS1	92	63.930	Ornithorhynchus_anatinus
ENSSLDG00000022850	pus1	86	65.591	ENSOCUG00000007310	PUS1	81	65.426	Oryctolagus_cuniculus
ENSSLDG00000022850	pus1	100	80.095	ENSORLG00000010787	pus1	100	80.095	Oryzias_latipes
ENSSLDG00000022850	pus1	100	79.621	ENSORLG00020011483	pus1	100	79.621	Oryzias_latipes_hni
ENSSLDG00000022850	pus1	100	79.858	ENSORLG00015023012	pus1	99	83.077	Oryzias_latipes_hsok
ENSSLDG00000022850	pus1	98	79.075	ENSOMEG00000022655	pus1	96	79.075	Oryzias_melastigma
ENSSLDG00000022850	pus1	85	67.787	ENSOGAG00000008720	PUS1	92	68.627	Otolemur_garnettii
ENSSLDG00000022850	pus1	89	66.043	ENSOARG00000013316	PUS1	84	66.043	Ovis_aries
ENSSLDG00000022850	pus1	86	68.975	ENSPPAG00000040971	PUS1	87	69.632	Pan_paniscus
ENSSLDG00000022850	pus1	84	68.451	ENSPPRG00000015456	PUS1	88	68.451	Panthera_pardus
ENSSLDG00000022850	pus1	84	68.182	ENSPTIG00000004201	PUS1	90	68.451	Panthera_tigris_altaica
ENSSLDG00000022850	pus1	86	68.975	ENSPTRG00000005643	PUS1	87	69.632	Pan_troglodytes
ENSSLDG00000022850	pus1	86	68.144	ENSPANG00000000376	PUS1	89	68.712	Papio_anubis
ENSSLDG00000022850	pus1	87	68.937	ENSPKIG00000019369	pus1	87	66.927	Paramormyrops_kingsleyae
ENSSLDG00000022850	pus1	89	66.844	ENSPSIG00000016432	PUS1	88	66.579	Pelodiscus_sinensis
ENSSLDG00000022850	pus1	63	30.000	ENSPSIG00000013961	PUS3	52	30.314	Pelodiscus_sinensis
ENSSLDG00000022850	pus1	88	78.495	ENSPMGG00000004522	pus1	96	78.495	Periophthalmus_magnuspinnatus
ENSSLDG00000022850	pus1	87	67.760	ENSPEMG00000013448	Pus1	86	67.760	Peromyscus_maniculatus_bairdii
ENSSLDG00000022850	pus1	78	59.639	ENSPMAG00000004636	pus1	99	59.639	Petromyzon_marinus
ENSSLDG00000022850	pus1	71	58.804	ENSPCIG00000022609	-	77	56.966	Phascolarctos_cinereus
ENSSLDG00000022850	pus1	100	81.235	ENSPFOG00000019669	pus1	100	81.235	Poecilia_formosa
ENSSLDG00000022850	pus1	100	80.998	ENSPLAG00000002692	-	100	80.998	Poecilia_latipinna
ENSSLDG00000022850	pus1	100	80.998	ENSPLAG00000007185	pus1	100	80.998	Poecilia_latipinna
ENSSLDG00000022850	pus1	98	81.752	ENSPMEG00000006038	pus1	98	84.091	Poecilia_mexicana
ENSSLDG00000022850	pus1	100	81.473	ENSPMEG00000011115	PUS1	100	81.473	Poecilia_mexicana
ENSSLDG00000022850	pus1	94	84.304	ENSPREG00000007231	pus1	99	86.351	Poecilia_reticulata
ENSSLDG00000022850	pus1	94	63.409	ENSPPYG00000005132	PUS1	93	63.409	Pongo_abelii
ENSSLDG00000022850	pus1	62	65.779	ENSPCAG00000009110	-	64	65.779	Procavia_capensis
ENSSLDG00000022850	pus1	76	65.831	ENSPCOG00000015595	PUS1	91	59.043	Propithecus_coquereli
ENSSLDG00000022850	pus1	100	84.561	ENSPNYG00000013571	pus1	100	84.561	Pundamilia_nyererei
ENSSLDG00000022850	pus1	100	68.235	ENSPNAG00000003938	pus1	98	68.235	Pygocentrus_nattereri
ENSSLDG00000022850	pus1	87	67.486	ENSRNOG00000037500	Pus1	86	66.488	Rattus_norvegicus
ENSSLDG00000022850	pus1	86	68.698	ENSRBIG00000043177	PUS1	90	69.325	Rhinopithecus_bieti
ENSSLDG00000022850	pus1	86	68.698	ENSRROG00000039744	PUS1	88	68.874	Rhinopithecus_roxellana
ENSSLDG00000022850	pus1	81	41.447	YPL212C	-	65	40.244	Saccharomyces_cerevisiae
ENSSLDG00000022850	pus1	86	68.144	ENSSBOG00000023593	PUS1	92	68.421	Saimiri_boliviensis_boliviensis
ENSSLDG00000022850	pus1	85	67.222	ENSSHAG00000013193	PUS1	85	68.481	Sarcophilus_harrisii
ENSSLDG00000022850	pus1	87	70.000	ENSSFOG00015003463	pus1	87	69.110	Scleropages_formosus
ENSSLDG00000022850	pus1	100	83.135	ENSSMAG00000019075	pus1	100	83.135	Scophthalmus_maximus
ENSSLDG00000022850	pus1	100	99.525	ENSSDUG00000007102	pus1	100	99.525	Seriola_dumerili
ENSSLDG00000022850	pus1	72	61.716	ENSSARG00000008367	PUS1	98	61.716	Sorex_araneus
ENSSLDG00000022850	pus1	89	66.227	ENSSPUG00000010009	PUS1	95	66.227	Sphenodon_punctatus
ENSSLDG00000022850	pus1	93	87.212	ENSSPAG00000006272	pus1	99	87.212	Stegastes_partitus
ENSSLDG00000022850	pus1	89	66.489	ENSSSCG00000009741	PUS1	91	68.306	Sus_scrofa
ENSSLDG00000022850	pus1	78	74.242	ENSTGUG00000008068	PUS1	100	74.622	Taeniopygia_guttata
ENSSLDG00000022850	pus1	89	78.723	ENSTRUG00000002198	pus1	92	80.609	Takifugu_rubripes
ENSSLDG00000022850	pus1	93	74.046	ENSTNIG00000003942	pus1	98	74.809	Tetraodon_nigroviridis
ENSSLDG00000022850	pus1	92	64.781	ENSTTRG00000000632	PUS1	91	64.781	Tursiops_truncatus
ENSSLDG00000022850	pus1	81	69.883	ENSUAMG00000017197	PUS1	86	69.883	Ursus_americanus
ENSSLDG00000022850	pus1	93	64.103	ENSUMAG00000002831	PUS1	94	72.293	Ursus_maritimus
ENSSLDG00000022850	pus1	84	68.732	ENSVVUG00000004199	PUS1	80	68.732	Vulpes_vulpes
ENSSLDG00000022850	pus1	76	48.297	ENSXETG00000033640	-	99	48.297	Xenopus_tropicalis
ENSSLDG00000022850	pus1	88	65.041	ENSXETG00000002030	pus1	91	65.041	Xenopus_tropicalis
ENSSLDG00000022850	pus1	94	86.364	ENSXCOG00000004722	pus1	98	87.632	Xiphophorus_couchianus
ENSSLDG00000022850	pus1	100	82.898	ENSXMAG00000000988	pus1	100	82.898	Xiphophorus_maculatus