EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000022863 (Gene tree)
Gene ID: -
Gene Symbol: fubp1
Alias: wu:fa92h11|wu:fb24h11|wu:fc26f06|zgc:66046
Full Name: far upstream element binding protein 1
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 11244 bases
Position: chrPEQF01098920.1:534080-545323
Accession: 111658380
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000029804	KH_1	PF00013.29	1.5e-68	1	4
ENSSLDP00000029804	KH_1	PF00013.29	1.5e-68	2	4
ENSSLDP00000029804	KH_1	PF00013.29	1.5e-68	3	4
ENSSLDP00000029804	KH_1	PF00013.29	1.5e-68	4	4
ENSSLDP00000029778	KH_1	PF00013.29	1.5e-68	1	4
ENSSLDP00000029778	KH_1	PF00013.29	1.5e-68	2	4
ENSSLDP00000029778	KH_1	PF00013.29	1.5e-68	3	4
ENSSLDP00000029778	KH_1	PF00013.29	1.5e-68	4	4
ENSSLDP00000029748	KH_1	PF00013.29	1.9e-68	1	4
ENSSLDP00000029748	KH_1	PF00013.29	1.9e-68	2	4
ENSSLDP00000029748	KH_1	PF00013.29	1.9e-68	3	4
ENSSLDP00000029748	KH_1	PF00013.29	1.9e-68	4	4
ENSSLDP00000029717	KH_1	PF00013.29	2.2e-68	1	4
ENSSLDP00000029717	KH_1	PF00013.29	2.2e-68	2	4
ENSSLDP00000029717	KH_1	PF00013.29	2.2e-68	3	4
ENSSLDP00000029717	KH_1	PF00013.29	2.2e-68	4	4
ENSSLDP00000029697	KH_1	PF00013.29	2.6e-68	1	4
ENSSLDP00000029697	KH_1	PF00013.29	2.6e-68	2	4
ENSSLDP00000029697	KH_1	PF00013.29	2.6e-68	3	4
ENSSLDP00000029697	KH_1	PF00013.29	2.6e-68	4	4
ENSSLDP00000029778	KH_2	PF07650.17	1.4e-20	1	2
ENSSLDP00000029778	KH_2	PF07650.17	1.4e-20	2	2
ENSSLDP00000029748	KH_2	PF07650.17	1.7e-20	1	2
ENSSLDP00000029748	KH_2	PF07650.17	1.7e-20	2	2
ENSSLDP00000029804	KH_2	PF07650.17	1.8e-20	1	2
ENSSLDP00000029804	KH_2	PF07650.17	1.8e-20	2	2
ENSSLDP00000029717	KH_2	PF07650.17	2e-20	1	2
ENSSLDP00000029717	KH_2	PF07650.17	2e-20	2	2
ENSSLDP00000029697	KH_2	PF07650.17	2.4e-20	1	2
ENSSLDP00000029697	KH_2	PF07650.17	2.4e-20	2	2
ENSSLDP00000029697	DUF1897	PF09005.10	1.7e-13	1	2
ENSSLDP00000029697	DUF1897	PF09005.10	1.7e-13	2	2
ENSSLDP00000029748	DUF1897	PF09005.10	6.9e-13	1	2
ENSSLDP00000029748	DUF1897	PF09005.10	6.9e-13	2	2
ENSSLDP00000029778	DUF1897	PF09005.10	2.8e-08	1	1
ENSSLDP00000029717	DUF1897	PF09005.10	6.2e-08	1	1
ENSSLDP00000029804	DUF1897	PF09005.10	2.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000030558	-	4065	XM_023410880	ENSSLDP00000029697	680 (aa)	XP_023266648	-
ENSSLDT00000030582	-	3990	XM_023410884	ENSSLDP00000029717	655 (aa)	XP_023266652	-
ENSSLDT00000030668	-	1830	-	ENSSLDP00000029804	609 (aa)	-	-
ENSSLDT00000030642	-	3864	XM_023410886	ENSSLDP00000029778	613 (aa)	XP_023266654	-
ENSSLDT00000030611	-	3939	XM_023410885	ENSSLDP00000029748	638 (aa)	XP_023266653	-

Gene Model

Click here to download ENSSLDG00000022863's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000022863's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000022863	fubp1	98	49.752	ENSSLDG00000009455	FUBP3	97	48.510
ENSSLDG00000022863	fubp1	82	54.415	ENSSLDG00000013592	-	90	52.881
ENSSLDG00000022863	fubp1	52	35.802	ENSSLDG00000008518	pcbp3	66	35.802
ENSSLDG00000022863	fubp1	59	32.941	ENSSLDG00000025576	igf2bp3	68	32.164
ENSSLDG00000022863	fubp1	59	46.296	ENSSLDG00000002018	PCBP2	96	46.296
ENSSLDG00000022863	fubp1	63	30.409	ENSSLDG00000011912	igf2bp1	65	30.769
ENSSLDG00000022863	fubp1	97	51.286	ENSSLDG00000012993	khsrp	99	51.684
ENSSLDG00000022863	fubp1	93	55.287	ENSSLDG00000025625	KHSRP	97	53.353
ENSSLDG00000022863	fubp1	67	36.250	ENSSLDG00000021064	zgc:110045	63	32.215
ENSSLDG00000022863	fubp1	56	36.364	ENSSLDG00000006713	nova1	51	36.364
ENSSLDG00000022863	fubp1	61	42.857	ENSSLDG00000008839	pcbp2	96	42.857
ENSSLDG00000022863	fubp1	52	36.000	ENSSLDG00000020161	-	67	36.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000022863	fubp1	72	76.535	ENSG00000162613	FUBP1	100	69.865	Homo_sapiens
ENSSLDG00000022863	fubp1	99	94.703	ENSAPOG00000014845	fubp1	98	94.703	Acanthochromis_polyacanthus
ENSSLDG00000022863	fubp1	71	75.052	ENSAMEG00000007372	FUBP1	100	69.219	Ailuropoda_melanoleuca
ENSSLDG00000022863	fubp1	100	90.694	ENSACIG00000020024	fubp1	100	90.694	Amphilophus_citrinellus
ENSSLDG00000022863	fubp1	100	94.463	ENSAPEG00000012232	fubp1	100	94.463	Amphiprion_percula
ENSSLDG00000022863	fubp1	98	96.992	ENSATEG00000018619	fubp1	100	96.992	Anabas_testudineus
ENSSLDG00000022863	fubp1	67	78.125	ENSAPLG00000005965	FUBP1	100	70.806	Anas_platyrhynchos
ENSSLDG00000022863	fubp1	73	75.687	ENSACAG00000006310	FUBP1	96	69.666	Anolis_carolinensis
ENSSLDG00000022863	fubp1	98	96.229	ENSACLG00000006708	fubp1	100	96.096	Astatotilapia_calliptera
ENSSLDG00000022863	fubp1	84	85.586	ENSAMXG00000005525	fubp1	99	84.746	Astyanax_mexicanus
ENSSLDG00000022863	fubp1	72	76.754	ENSCJAG00000007062	FUBP1	100	70.242	Callithrix_jacchus
ENSSLDG00000022863	fubp1	72	76.754	ENSCAFG00000020361	FUBP1	100	70.015	Canis_familiaris
ENSSLDG00000022863	fubp1	67	78.125	ENSTSYG00000000148	FUBP1	100	70.016	Carlito_syrichta
ENSSLDG00000022863	fubp1	57	84.274	ENSCAPG00000011052	-	65	84.274	Cavia_aperea
ENSSLDG00000022863	fubp1	72	76.754	ENSCPOG00000002757	FUBP1	100	69.281	Cavia_porcellus
ENSSLDG00000022863	fubp1	89	62.050	ENSCCAG00000036537	FUBP1	100	62.644	Cebus_capucinus
ENSSLDG00000022863	fubp1	72	76.535	ENSCATG00000042126	FUBP1	100	69.865	Cercocebus_atys
ENSSLDG00000022863	fubp1	72	77.629	ENSCLAG00000005621	FUBP1	100	72.152	Chinchilla_lanigera
ENSSLDG00000022863	fubp1	72	76.535	ENSCSAG00000001402	FUBP1	100	69.865	Chlorocebus_sabaeus
ENSSLDG00000022863	fubp1	72	76.535	ENSCHOG00000008177	FUBP1	98	70.120	Choloepus_hoffmanni
ENSSLDG00000022863	fubp1	72	77.605	ENSCGRG00001007103	Fubp1	100	70.376	Cricetulus_griseus_chok1gshd
ENSSLDG00000022863	fubp1	67	78.125	ENSCGRG00000003372	Fubp1	100	70.159	Cricetulus_griseus_crigri
ENSSLDG00000022863	fubp1	100	93.282	ENSCSEG00000021412	fubp1	100	92.672	Cynoglossus_semilaevis
ENSSLDG00000022863	fubp1	98	93.967	ENSCVAG00000014487	fubp1	99	93.967	Cyprinodon_variegatus
ENSSLDG00000022863	fubp1	98	82.749	ENSDARG00000029248	fubp1	100	82.456	Danio_rerio
ENSSLDG00000022863	fubp1	88	52.222	ENSDNOG00000034565	-	87	48.465	Dasypus_novemcinctus
ENSSLDG00000022863	fubp1	73	76.190	ENSDORG00000016534	Fubp1	98	69.970	Dipodomys_ordii
ENSSLDG00000022863	fubp1	79	75.921	ENSETEG00000000948	-	58	76.232	Echinops_telfairi
ENSSLDG00000022863	fubp1	70	65.625	ENSEBUG00000016143	fubp1	64	63.235	Eptatretus_burgeri
ENSSLDG00000022863	fubp1	78	82.432	ENSEEUG00000001287	FUBP1	87	71.575	Erinaceus_europaeus
ENSSLDG00000022863	fubp1	98	84.332	ENSELUG00000007990	fubp1	100	84.911	Esox_lucius
ENSSLDG00000022863	fubp1	72	77.093	ENSFALG00000005768	FUBP1	97	70.517	Ficedula_albicollis
ENSSLDG00000022863	fubp1	72	76.535	ENSFDAG00000014210	FUBP1	100	70.270	Fukomys_damarensis
ENSSLDG00000022863	fubp1	98	94.586	ENSFHEG00000005230	fubp1	100	94.586	Fundulus_heteroclitus
ENSSLDG00000022863	fubp1	98	84.544	ENSGMOG00000003370	fubp1	100	83.437	Gadus_morhua
ENSSLDG00000022863	fubp1	72	77.582	ENSGALG00000008939	FUBP1	100	71.558	Gallus_gallus
ENSSLDG00000022863	fubp1	98	96.406	ENSGAFG00000020972	fubp1	100	96.406	Gambusia_affinis
ENSSLDG00000022863	fubp1	98	91.231	ENSGACG00000016563	fubp1	100	90.615	Gasterosteus_aculeatus
ENSSLDG00000022863	fubp1	98	96.391	ENSHBUG00000009835	fubp1	100	96.518	Haplochromis_burtoni
ENSSLDG00000022863	fubp1	72	76.754	ENSHGLG00000008415	-	100	72.152	Heterocephalus_glaber_female
ENSSLDG00000022863	fubp1	75	72.152	ENSHGLG00000002808	-	100	64.264	Heterocephalus_glaber_female
ENSSLDG00000022863	fubp1	72	76.754	ENSHGLG00100003417	-	100	69.552	Heterocephalus_glaber_male
ENSSLDG00000022863	fubp1	75	72.785	ENSHGLG00100001414	-	100	64.865	Heterocephalus_glaber_male
ENSSLDG00000022863	fubp1	98	95.672	ENSHCOG00000000910	fubp1	100	95.672	Hippocampus_comes
ENSSLDG00000022863	fubp1	98	82.116	ENSIPUG00000009896	fubp1	100	83.159	Ictalurus_punctatus
ENSSLDG00000022863	fubp1	72	77.405	ENSSTOG00000014312	FUBP1	100	70.015	Ictidomys_tridecemlineatus
ENSSLDG00000022863	fubp1	72	77.181	ENSJJAG00000020069	Fubp1	100	70.376	Jaculus_jaculus
ENSSLDG00000022863	fubp1	98	94.012	ENSKMAG00000018897	fubp1	100	92.515	Kryptolebias_marmoratus
ENSSLDG00000022863	fubp1	99	95.044	ENSLBEG00000012700	fubp1	99	95.044	Labrus_bergylta
ENSSLDG00000022863	fubp1	96	81.409	ENSLOCG00000003745	fubp1	99	80.617	Lepisosteus_oculatus
ENSSLDG00000022863	fubp1	71	75.681	ENSLAFG00000003273	FUBP1	99	72.093	Loxodonta_africana
ENSSLDG00000022863	fubp1	72	76.535	ENSMFAG00000031825	FUBP1	100	70.091	Macaca_fascicularis
ENSSLDG00000022863	fubp1	72	77.181	ENSMMUG00000002899	FUBP1	100	69.865	Macaca_mulatta
ENSSLDG00000022863	fubp1	72	76.535	ENSMNEG00000045212	FUBP1	100	69.865	Macaca_nemestrina
ENSSLDG00000022863	fubp1	98	98.190	ENSMAMG00000007489	fubp1	99	98.190	Mastacembelus_armatus
ENSSLDG00000022863	fubp1	98	96.241	ENSMZEG00005024298	fubp1	100	96.241	Maylandia_zebra
ENSSLDG00000022863	fubp1	67	78.177	ENSMGAG00000009424	FUBP1	100	71.108	Meleagris_gallopavo
ENSSLDG00000022863	fubp1	72	76.754	ENSMAUG00000016428	Fubp1	98	70.946	Mesocricetus_auratus
ENSSLDG00000022863	fubp1	72	77.434	ENSMOCG00000014751	Fubp1	100	70.274	Microtus_ochrogaster
ENSSLDG00000022863	fubp1	86	90.826	ENSMMOG00000019463	fubp1	99	92.896	Mola_mola
ENSSLDG00000022863	fubp1	69	69.933	ENSMODG00000020804	FUBP1	100	65.084	Monodelphis_domestica
ENSSLDG00000022863	fubp1	98	96.391	ENSMALG00000015173	fubp1	100	96.391	Monopterus_albus
ENSSLDG00000022863	fubp1	73	77.391	MGP_CAROLIEiJ_G0025740	Fubp1	99	74.484	Mus_caroli
ENSSLDG00000022863	fubp1	73	77.174	ENSMUSG00000028034	Fubp1	99	74.296	Mus_musculus
ENSSLDG00000022863	fubp1	73	77.223	MGP_PahariEiJ_G0027191	Fubp1	99	74.345	Mus_pahari
ENSSLDG00000022863	fubp1	73	77.391	MGP_SPRETEiJ_G0026693	Fubp1	99	74.484	Mus_spretus
ENSSLDG00000022863	fubp1	71	74.896	ENSMLUG00000014802	FUBP1	100	68.768	Myotis_lucifugus
ENSSLDG00000022863	fubp1	72	74.273	ENSNGAG00000014302	Fubp1	100	68.627	Nannospalax_galili
ENSSLDG00000022863	fubp1	100	92.951	ENSNBRG00000015099	fubp1	100	93.115	Neolamprologus_brichardi
ENSSLDG00000022863	fubp1	72	71.834	ENSNLEG00000009772	FUBP1	100	68.421	Nomascus_leucogenys
ENSSLDG00000022863	fubp1	55	83.824	ENSMEUG00000007917	-	59	83.824	Notamacropus_eugenii
ENSSLDG00000022863	fubp1	68	88.679	ENSOPRG00000001175	FUBP1	98	59.337	Ochotona_princeps
ENSSLDG00000022863	fubp1	99	53.420	ENSODEG00000003657	-	99	51.204	Octodon_degus
ENSSLDG00000022863	fubp1	72	76.754	ENSODEG00000002600	-	100	70.270	Octodon_degus
ENSSLDG00000022863	fubp1	98	96.380	ENSONIG00000018381	fubp1	99	95.490	Oreochromis_niloticus
ENSSLDG00000022863	fubp1	63	79.949	ENSOANG00000009777	FUBP1	100	70.560	Ornithorhynchus_anatinus
ENSSLDG00000022863	fubp1	99	90.344	ENSORLG00000003540	fubp1	99	89.362	Oryzias_latipes
ENSSLDG00000022863	fubp1	99	91.471	ENSORLG00020005908	fubp1	99	89.593	Oryzias_latipes_hni
ENSSLDG00000022863	fubp1	98	92.964	ENSORLG00015008779	fubp1	100	92.248	Oryzias_latipes_hsok
ENSSLDG00000022863	fubp1	99	91.016	ENSOMEG00000021943	fubp1	99	91.016	Oryzias_melastigma
ENSSLDG00000022863	fubp1	71	74.741	ENSOGAG00000014233	FUBP1	100	68.960	Otolemur_garnettii
ENSSLDG00000022863	fubp1	73	76.724	ENSOARG00000013259	FUBP1	100	71.449	Ovis_aries
ENSSLDG00000022863	fubp1	72	76.754	ENSPPRG00000000413	FUBP1	100	70.015	Panthera_pardus
ENSSLDG00000022863	fubp1	72	76.754	ENSPTIG00000019450	FUBP1	100	70.015	Panthera_tigris_altaica
ENSSLDG00000022863	fubp1	68	77.069	ENSPSIG00000012965	FUBP1	100	70.159	Pelodiscus_sinensis
ENSSLDG00000022863	fubp1	97	82.743	ENSPMGG00000009060	fubp1	99	81.356	Periophthalmus_magnuspinnatus
ENSSLDG00000022863	fubp1	72	77.827	ENSPEMG00000021802	Fubp1	100	70.270	Peromyscus_maniculatus_bairdii
ENSSLDG00000022863	fubp1	65	58.696	ENSPMAG00000001644	-	93	58.696	Petromyzon_marinus
ENSSLDG00000022863	fubp1	98	95.038	ENSPFOG00000000238	fubp1	100	95.038	Poecilia_formosa
ENSSLDG00000022863	fubp1	100	91.993	ENSPLAG00000021170	fubp1	100	92.188	Poecilia_latipinna
ENSSLDG00000022863	fubp1	99	89.855	ENSPMEG00000004747	fubp1	99	95.567	Poecilia_mexicana
ENSSLDG00000022863	fubp1	98	94.887	ENSPREG00000017911	fubp1	100	94.887	Poecilia_reticulata
ENSSLDG00000022863	fubp1	76	76.000	ENSPPYG00000001219	-	68	77.056	Pongo_abelii
ENSSLDG00000022863	fubp1	72	76.703	ENSPCAG00000012617	FUBP1	98	69.925	Procavia_capensis
ENSSLDG00000022863	fubp1	90	74.569	ENSPCOG00000024974	FUBP1	100	70.015	Propithecus_coquereli
ENSSLDG00000022863	fubp1	72	70.614	ENSPVAG00000014637	FUBP1	98	65.766	Pteropus_vampyrus
ENSSLDG00000022863	fubp1	98	96.241	ENSPNYG00000004552	fubp1	100	96.241	Pundamilia_nyererei
ENSSLDG00000022863	fubp1	98	85.587	ENSPNAG00000016207	fubp1	100	85.736	Pygocentrus_nattereri
ENSSLDG00000022863	fubp1	72	77.162	ENSRNOG00000043370	Fubp1	100	70.499	Rattus_norvegicus
ENSSLDG00000022863	fubp1	72	76.535	ENSRBIG00000042950	FUBP1	100	69.865	Rhinopithecus_bieti
ENSSLDG00000022863	fubp1	72	76.535	ENSRROG00000043534	FUBP1	100	69.865	Rhinopithecus_roxellana
ENSSLDG00000022863	fubp1	72	76.754	ENSSBOG00000027299	FUBP1	98	72.862	Saimiri_boliviensis_boliviensis
ENSSLDG00000022863	fubp1	67	76.611	ENSSHAG00000005367	FUBP1	99	72.777	Sarcophilus_harrisii
ENSSLDG00000022863	fubp1	97	83.258	ENSSFOG00015010213	fubp1	99	83.107	Scleropages_formosus
ENSSLDG00000022863	fubp1	100	89.828	ENSSMAG00000012029	fubp1	100	89.828	Scophthalmus_maximus
ENSSLDG00000022863	fubp1	100	100.000	ENSSDUG00000007383	fubp1	100	100.000	Seriola_dumerili
ENSSLDG00000022863	fubp1	72	87.356	ENSSARG00000011730	FUBP1	56	88.372	Sorex_araneus
ENSSLDG00000022863	fubp1	98	67.737	ENSSPUG00000008389	FUBP1	100	68.162	Sphenodon_punctatus
ENSSLDG00000022863	fubp1	98	97.744	ENSSPAG00000010161	fubp1	100	97.744	Stegastes_partitus
ENSSLDG00000022863	fubp1	67	77.251	ENSTGUG00000006841	FUBP1	100	70.288	Taeniopygia_guttata
ENSSLDG00000022863	fubp1	98	88.389	ENSTRUG00000004615	fubp1	100	87.954	Takifugu_rubripes
ENSSLDG00000022863	fubp1	50	86.310	ENSTNIG00000019815	-	99	86.310	Tetraodon_nigroviridis
ENSSLDG00000022863	fubp1	79	82.143	ENSTBEG00000017333	FUBP1	64	88.095	Tupaia_belangeri
ENSSLDG00000022863	fubp1	72	76.754	ENSTTRG00000000096	FUBP1	98	69.820	Tursiops_truncatus
ENSSLDG00000022863	fubp1	72	76.754	ENSVPAG00000004709	FUBP1	99	69.820	Vicugna_pacos
ENSSLDG00000022863	fubp1	100	83.413	ENSXCOG00000019354	fubp1	100	81.734	Xiphophorus_couchianus
ENSSLDG00000022863	fubp1	96	89.590	ENSXMAG00000007168	fubp1	99	95.238	Xiphophorus_maculatus