EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000022965 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-214j24.10
Alias: wu:fe25a04|wu:fi43c10|wu:fj94e11|wu:fv36e07|zgc:136274
Full Name: uncharacterized LOC111654769
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 8179 bases
Position: chrPEQF01098768.1:3050-11228
Accession: 111654769
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000029783	NUFIP2	PF15293.6	3e-23	1	1
ENSSLDP00000029781	NUFIP2	PF15293.6	3.2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000030646	-	1021	-	ENSSLDP00000029781	273 (aa)	-	-
ENSSLDT00000030647	-	4641	XM_023405902	ENSSLDP00000029783	307 (aa)	XP_023261670	-

Gene Model

Click here to download ENSSLDG00000022965's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000022965's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000022965	si:ch211-214j24.10	99	87.085	ENSAPOG00000017055	si:ch211-214j24.10	99	85.714	Acanthochromis_polyacanthus
ENSSLDG00000022965	si:ch211-214j24.10	99	70.632	ENSACIG00000010613	si:ch211-214j24.10	98	68.493	Amphilophus_citrinellus
ENSSLDG00000022965	si:ch211-214j24.10	99	87.454	ENSAOCG00000009719	si:ch211-214j24.10	99	86.054	Amphiprion_ocellaris
ENSSLDG00000022965	si:ch211-214j24.10	99	87.454	ENSAPEG00000021403	si:ch211-214j24.10	99	86.054	Amphiprion_percula
ENSSLDG00000022965	si:ch211-214j24.10	99	84.191	ENSATEG00000002825	si:ch211-214j24.10	82	83.390	Anabas_testudineus
ENSSLDG00000022965	si:ch211-214j24.10	99	81.919	ENSACLG00000018365	si:ch211-214j24.10	99	81.633	Astatotilapia_calliptera
ENSSLDG00000022965	si:ch211-214j24.10	99	50.714	ENSAMXG00000030271	si:ch211-214j24.10	98	49.324	Astyanax_mexicanus
ENSSLDG00000022965	si:ch211-214j24.10	99	73.063	ENSCSEG00000017523	si:ch211-214j24.10	94	73.432	Cynoglossus_semilaevis
ENSSLDG00000022965	si:ch211-214j24.10	99	68.148	ENSCVAG00000022007	si:ch211-214j24.10	99	67.466	Cyprinodon_variegatus
ENSSLDG00000022965	si:ch211-214j24.10	99	52.788	ENSDARG00000045847	si:ch211-214j24.10	99	51.712	Danio_rerio
ENSSLDG00000022965	si:ch211-214j24.10	98	60.507	ENSELUG00000021832	si:ch211-214j24.10	98	60.201	Esox_lucius
ENSSLDG00000022965	si:ch211-214j24.10	99	72.119	ENSFHEG00000000763	si:ch211-214j24.10	99	71.575	Fundulus_heteroclitus
ENSSLDG00000022965	si:ch211-214j24.10	99	69.818	ENSGAFG00000005353	si:ch211-214j24.10	99	69.128	Gambusia_affinis
ENSSLDG00000022965	si:ch211-214j24.10	99	79.554	ENSGACG00000019495	si:ch211-214j24.10	99	78.049	Gasterosteus_aculeatus
ENSSLDG00000022965	si:ch211-214j24.10	99	81.550	ENSHBUG00000005808	si:ch211-214j24.10	99	81.293	Haplochromis_burtoni
ENSSLDG00000022965	si:ch211-214j24.10	99	71.795	ENSHCOG00000009918	si:ch211-214j24.10	99	73.311	Hippocampus_comes
ENSSLDG00000022965	si:ch211-214j24.10	99	48.905	ENSIPUG00000005916	si:ch211-214j24.10	98	47.945	Ictalurus_punctatus
ENSSLDG00000022965	si:ch211-214j24.10	99	68.401	ENSKMAG00000021149	si:ch211-214j24.10	99	69.178	Kryptolebias_marmoratus
ENSSLDG00000022965	si:ch211-214j24.10	99	83.026	ENSLBEG00000010360	si:ch211-214j24.10	99	80.952	Labrus_bergylta
ENSSLDG00000022965	si:ch211-214j24.10	99	84.133	ENSMAMG00000023522	si:ch211-214j24.10	99	83.333	Mastacembelus_armatus
ENSSLDG00000022965	si:ch211-214j24.10	99	81.919	ENSMZEG00005014181	si:ch211-214j24.10	99	81.633	Maylandia_zebra
ENSSLDG00000022965	si:ch211-214j24.10	99	77.574	ENSMMOG00000010023	si:ch211-214j24.10	100	73.826	Mola_mola
ENSSLDG00000022965	si:ch211-214j24.10	99	82.657	ENSMALG00000011755	si:ch211-214j24.10	99	82.313	Monopterus_albus
ENSSLDG00000022965	si:ch211-214j24.10	95	81.226	ENSNBRG00000005384	si:ch211-214j24.10	98	78.472	Neolamprologus_brichardi
ENSSLDG00000022965	si:ch211-214j24.10	99	83.764	ENSONIG00000012083	si:ch211-214j24.10	99	83.333	Oreochromis_niloticus
ENSSLDG00000022965	si:ch211-214j24.10	99	68.266	ENSORLG00000012343	si:ch211-214j24.10	99	69.048	Oryzias_latipes
ENSSLDG00000022965	si:ch211-214j24.10	99	68.635	ENSORLG00020021390	si:ch211-214j24.10	99	69.388	Oryzias_latipes_hni
ENSSLDG00000022965	si:ch211-214j24.10	99	64.945	ENSORLG00015020102	si:ch211-214j24.10	98	63.265	Oryzias_latipes_hsok
ENSSLDG00000022965	si:ch211-214j24.10	99	69.485	ENSOMEG00000018780	si:ch211-214j24.10	99	70.169	Oryzias_melastigma
ENSSLDG00000022965	si:ch211-214j24.10	99	53.025	ENSPKIG00000000279	-	86	53.025	Paramormyrops_kingsleyae
ENSSLDG00000022965	si:ch211-214j24.10	60	72.289	ENSPMGG00000005149	si:ch211-214j24.10	88	71.856	Periophthalmus_magnuspinnatus
ENSSLDG00000022965	si:ch211-214j24.10	99	71.747	ENSPFOG00000004046	si:ch211-214j24.10	91	69.338	Poecilia_formosa
ENSSLDG00000022965	si:ch211-214j24.10	99	72.491	ENSPLAG00000012844	si:ch211-214j24.10	99	70.890	Poecilia_latipinna
ENSSLDG00000022965	si:ch211-214j24.10	99	71.747	ENSPMEG00000011245	si:ch211-214j24.10	99	70.890	Poecilia_mexicana
ENSSLDG00000022965	si:ch211-214j24.10	99	64.684	ENSPREG00000014266	si:ch211-214j24.10	98	61.644	Poecilia_reticulata
ENSSLDG00000022965	si:ch211-214j24.10	99	81.919	ENSPNYG00000023934	si:ch211-214j24.10	99	81.633	Pundamilia_nyererei
ENSSLDG00000022965	si:ch211-214j24.10	98	50.709	ENSSFOG00015001996	si:ch211-214j24.10	99	49.833	Scleropages_formosus
ENSSLDG00000022965	si:ch211-214j24.10	99	90.037	ENSSMAG00000013405	si:ch211-214j24.10	99	89.456	Scophthalmus_maximus
ENSSLDG00000022965	si:ch211-214j24.10	99	98.885	ENSSDUG00000016433	si:ch211-214j24.10	99	98.288	Seriola_dumerili
ENSSLDG00000022965	si:ch211-214j24.10	99	88.930	ENSSPAG00000000573	si:ch211-214j24.10	99	86.735	Stegastes_partitus
ENSSLDG00000022965	si:ch211-214j24.10	99	71.062	ENSTRUG00000003852	si:ch211-214j24.10	99	66.327	Takifugu_rubripes
ENSSLDG00000022965	si:ch211-214j24.10	95	66.795	ENSXCOG00000015231	si:ch211-214j24.10	97	64.211	Xiphophorus_couchianus
ENSSLDG00000022965	si:ch211-214j24.10	99	71.004	ENSXMAG00000006212	si:ch211-214j24.10	99	70.205	Xiphophorus_maculatus