EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000023005 (Gene tree)
Gene ID: -
Gene Symbol: apex1
Alias: hm:zehn1532|wu:fc13d11|zap1|zgc:66204
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 3979 bases
Position: chrPEQF01098768.1:17847-21825
Accession: 111654771
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000029834	Exo_endo_phos	PF03372.23	5.3e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000030698	-	3129	XM_023405904	ENSSLDP00000029834	310 (aa)	XP_023261672	UPI000C6F5184

Gene Model

Click here to download ENSSLDG00000023005's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000023005's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000023005	apex1	99	65.823	ENSG00000100823	APEX1	88	70.251	Homo_sapiens
ENSSLDG00000023005	apex1	100	88.387	ENSAPOG00000017002	apex1	100	88.387	Acanthochromis_polyacanthus
ENSSLDG00000023005	apex1	99	65.823	ENSAMEG00000005418	APEX1	99	65.823	Ailuropoda_melanoleuca
ENSSLDG00000023005	apex1	89	90.614	ENSACIG00000010653	apex1	95	90.714	Amphilophus_citrinellus
ENSSLDG00000023005	apex1	100	88.710	ENSAOCG00000009649	apex1	100	88.710	Amphiprion_ocellaris
ENSSLDG00000023005	apex1	100	89.032	ENSAPEG00000021453	apex1	100	89.032	Amphiprion_percula
ENSSLDG00000023005	apex1	99	89.968	ENSATEG00000002883	apex1	97	89.968	Anabas_testudineus
ENSSLDG00000023005	apex1	99	66.981	ENSACAG00000008099	APEX1	99	66.984	Anolis_carolinensis
ENSSLDG00000023005	apex1	99	66.456	ENSANAG00000030117	APEX1	99	66.456	Aotus_nancymaae
ENSSLDG00000023005	apex1	100	90.000	ENSACLG00000018441	apex1	100	90.000	Astatotilapia_calliptera
ENSSLDG00000023005	apex1	99	87.097	ENSAMXG00000034699	apex1	99	87.097	Astyanax_mexicanus
ENSSLDG00000023005	apex1	99	65.506	ENSBTAG00000002745	APEX1	99	65.506	Bos_taurus
ENSSLDG00000023005	apex1	91	42.657	WBGene00001372	exo-3	92	43.446	Caenorhabditis_elegans
ENSSLDG00000023005	apex1	99	66.456	ENSCJAG00000009726	APEX1	99	66.456	Callithrix_jacchus
ENSSLDG00000023005	apex1	99	66.139	ENSCAFG00000032033	APEX1	99	66.246	Canis_familiaris
ENSSLDG00000023005	apex1	99	66.139	ENSCAFG00020014377	-	99	66.246	Canis_lupus_dingo
ENSSLDG00000023005	apex1	53	58.824	ENSCAFG00020023002	-	94	59.064	Canis_lupus_dingo
ENSSLDG00000023005	apex1	99	65.506	ENSCHIG00000007298	-	99	65.506	Capra_hircus
ENSSLDG00000023005	apex1	89	54.676	ENSCHIG00000014537	-	89	53.957	Capra_hircus
ENSSLDG00000023005	apex1	99	64.873	ENSTSYG00000034813	APEX1	99	64.873	Carlito_syrichta
ENSSLDG00000023005	apex1	85	63.504	ENSCAPG00000016235	APEX1	91	69.492	Cavia_aperea
ENSSLDG00000023005	apex1	99	65.823	ENSCPOG00000030909	APEX1	88	70.251	Cavia_porcellus
ENSSLDG00000023005	apex1	99	66.456	ENSCCAG00000033056	-	99	66.456	Cebus_capucinus
ENSSLDG00000023005	apex1	99	57.911	ENSCCAG00000031931	-	87	61.290	Cebus_capucinus
ENSSLDG00000023005	apex1	99	66.139	ENSCATG00000015580	APEX1	88	70.609	Cercocebus_atys
ENSSLDG00000023005	apex1	99	66.139	ENSCLAG00000001002	APEX1	99	66.139	Chinchilla_lanigera
ENSSLDG00000023005	apex1	99	66.456	ENSCSAG00000016670	-	88	70.968	Chlorocebus_sabaeus
ENSSLDG00000023005	apex1	99	66.456	ENSCSAG00000016685	-	88	70.968	Chlorocebus_sabaeus
ENSSLDG00000023005	apex1	99	70.886	ENSCPBG00000009567	APEX1	99	70.253	Chrysemys_picta_bellii
ENSSLDG00000023005	apex1	99	55.882	ENSCING00000008137	-	93	55.556	Ciona_intestinalis
ENSSLDG00000023005	apex1	99	49.206	ENSCSAVG00000007144	-	100	53.876	Ciona_savignyi
ENSSLDG00000023005	apex1	99	66.139	ENSCANG00000030726	APEX1	99	66.139	Colobus_angolensis_palliatus
ENSSLDG00000023005	apex1	99	65.079	ENSCGRG00001017046	Apex1	99	65.079	Cricetulus_griseus_chok1gshd
ENSSLDG00000023005	apex1	99	65.079	ENSCGRG00000008984	Apex1	99	65.079	Cricetulus_griseus_crigri
ENSSLDG00000023005	apex1	100	88.710	ENSCSEG00000017499	apex1	99	88.710	Cynoglossus_semilaevis
ENSSLDG00000023005	apex1	100	89.355	ENSCVAG00000022075	apex1	100	89.355	Cyprinodon_variegatus
ENSSLDG00000023005	apex1	99	85.113	ENSDARG00000045843	apex1	99	85.113	Danio_rerio
ENSSLDG00000023005	apex1	99	62.342	ENSDNOG00000042234	APEX1	94	62.342	Dasypus_novemcinctus
ENSSLDG00000023005	apex1	99	65.190	ENSDORG00000001616	Apex1	99	65.190	Dipodomys_ordii
ENSSLDG00000023005	apex1	99	65.823	ENSETEG00000004855	-	99	65.823	Echinops_telfairi
ENSSLDG00000023005	apex1	76	59.664	ENSEBUG00000000622	-	92	59.664	Eptatretus_burgeri
ENSSLDG00000023005	apex1	99	66.562	ENSEASG00005017489	APEX1	65	70.609	Equus_asinus_asinus
ENSSLDG00000023005	apex1	99	66.562	ENSECAG00000022325	APEX1	72	70.609	Equus_caballus
ENSSLDG00000023005	apex1	86	69.517	ENSEEUG00000012569	APEX1	93	69.517	Erinaceus_europaeus
ENSSLDG00000023005	apex1	99	82.903	ENSELUG00000021706	apex1	99	85.161	Esox_lucius
ENSSLDG00000023005	apex1	99	66.139	ENSFCAG00000030869	APEX1	99	66.139	Felis_catus
ENSSLDG00000023005	apex1	99	66.456	ENSFDAG00000006120	APEX1	99	66.456	Fukomys_damarensis
ENSSLDG00000023005	apex1	100	88.710	ENSFHEG00000009031	apex1	83	88.710	Fundulus_heteroclitus
ENSSLDG00000023005	apex1	100	76.452	ENSGMOG00000007943	apex1	99	76.452	Gadus_morhua
ENSSLDG00000023005	apex1	100	90.645	ENSGAFG00000005311	apex1	100	90.645	Gambusia_affinis
ENSSLDG00000023005	apex1	100	90.645	ENSGACG00000019497	apex1	99	91.353	Gasterosteus_aculeatus
ENSSLDG00000023005	apex1	99	70.253	ENSGAGG00000014999	APEX1	99	69.937	Gopherus_agassizii
ENSSLDG00000023005	apex1	99	65.506	ENSGGOG00000002128	APEX1	88	69.892	Gorilla_gorilla
ENSSLDG00000023005	apex1	100	89.677	ENSHBUG00000005894	apex1	100	89.677	Haplochromis_burtoni
ENSSLDG00000023005	apex1	99	66.139	ENSHGLG00000002848	APEX1	99	66.139	Heterocephalus_glaber_female
ENSSLDG00000023005	apex1	99	66.139	ENSHGLG00100017878	APEX1	99	66.139	Heterocephalus_glaber_male
ENSSLDG00000023005	apex1	100	88.424	ENSHCOG00000009961	apex1	100	88.424	Hippocampus_comes
ENSSLDG00000023005	apex1	99	84.516	ENSIPUG00000005799	apex1	99	83.172	Ictalurus_punctatus
ENSSLDG00000023005	apex1	99	66.139	ENSSTOG00000010096	APEX1	99	66.139	Ictidomys_tridecemlineatus
ENSSLDG00000023005	apex1	99	64.873	ENSJJAG00000012067	-	88	69.176	Jaculus_jaculus
ENSSLDG00000023005	apex1	90	62.007	ENSJJAG00000020465	-	90	62.007	Jaculus_jaculus
ENSSLDG00000023005	apex1	99	57.911	ENSJJAG00000003660	-	88	61.290	Jaculus_jaculus
ENSSLDG00000023005	apex1	100	89.677	ENSKMAG00000021171	apex1	100	89.677	Kryptolebias_marmoratus
ENSSLDG00000023005	apex1	100	89.677	ENSLBEG00000010248	apex1	100	89.677	Labrus_bergylta
ENSSLDG00000023005	apex1	99	73.077	ENSLACG00000008617	APEX1	99	71.795	Latimeria_chalumnae
ENSSLDG00000023005	apex1	99	77.955	ENSLOCG00000015516	apex1	99	77.955	Lepisosteus_oculatus
ENSSLDG00000023005	apex1	99	66.772	ENSLAFG00000021872	APEX1	99	66.772	Loxodonta_africana
ENSSLDG00000023005	apex1	99	65.823	ENSMFAG00000002565	APEX1	88	70.609	Macaca_fascicularis
ENSSLDG00000023005	apex1	99	65.823	ENSMMUG00000048039	APEX1	88	70.609	Macaca_mulatta
ENSSLDG00000023005	apex1	99	65.931	ENSMNEG00000036944	APEX1	88	70.609	Macaca_nemestrina
ENSSLDG00000023005	apex1	99	66.139	ENSMLEG00000042125	APEX1	88	70.609	Mandrillus_leucophaeus
ENSSLDG00000023005	apex1	100	92.258	ENSMAMG00000023526	apex1	100	92.258	Mastacembelus_armatus
ENSSLDG00000023005	apex1	100	90.000	ENSMZEG00005014187	apex1	100	90.000	Maylandia_zebra
ENSSLDG00000023005	apex1	99	65.397	ENSMAUG00000013994	Apex1	88	69.176	Mesocricetus_auratus
ENSSLDG00000023005	apex1	99	64.873	ENSMICG00000043554	APEX1	88	69.534	Microcebus_murinus
ENSSLDG00000023005	apex1	99	66.667	ENSMOCG00000013721	Apex1	99	66.667	Microtus_ochrogaster
ENSSLDG00000023005	apex1	100	86.495	ENSMMOG00000010031	apex1	97	86.495	Mola_mola
ENSSLDG00000023005	apex1	91	68.198	ENSMODG00000007125	APEX1	99	63.836	Monodelphis_domestica
ENSSLDG00000023005	apex1	90	85.000	ENSMALG00000011699	apex1	75	85.000	Monopterus_albus
ENSSLDG00000023005	apex1	99	67.197	MGP_CAROLIEiJ_G0019209	Apex1	99	67.197	Mus_caroli
ENSSLDG00000023005	apex1	99	67.302	ENSMUSG00000035960	Apex1	99	67.302	Mus_musculus
ENSSLDG00000023005	apex1	99	66.667	MGP_PahariEiJ_G0030232	Apex1	99	66.667	Mus_pahari
ENSSLDG00000023005	apex1	99	67.302	MGP_SPRETEiJ_G0020101	Apex1	99	67.302	Mus_spretus
ENSSLDG00000023005	apex1	99	65.204	ENSMLUG00000028957	APEX1	87	69.534	Myotis_lucifugus
ENSSLDG00000023005	apex1	87	51.986	ENSNGAG00000021748	-	85	51.986	Nannospalax_galili
ENSSLDG00000023005	apex1	99	65.190	ENSNGAG00000002725	-	99	65.190	Nannospalax_galili
ENSSLDG00000023005	apex1	100	90.323	ENSNBRG00000005334	apex1	91	90.323	Neolamprologus_brichardi
ENSSLDG00000023005	apex1	99	66.559	ENSNLEG00000010839	APEX1	99	65.506	Nomascus_leucogenys
ENSSLDG00000023005	apex1	99	65.605	ENSMEUG00000014519	APEX1	99	65.176	Notamacropus_eugenii
ENSSLDG00000023005	apex1	99	65.823	ENSOPRG00000014029	APEX1	99	65.823	Ochotona_princeps
ENSSLDG00000023005	apex1	99	51.863	ENSODEG00000006583	-	87	54.737	Octodon_degus
ENSSLDG00000023005	apex1	95	51.186	ENSODEG00000004777	-	83	56.917	Octodon_degus
ENSSLDG00000023005	apex1	99	66.139	ENSODEG00000001703	-	99	66.139	Octodon_degus
ENSSLDG00000023005	apex1	100	90.000	ENSONIG00000012089	apex1	100	90.000	Oreochromis_niloticus
ENSSLDG00000023005	apex1	92	67.719	ENSOANG00000008836	APEX1	68	69.091	Ornithorhynchus_anatinus
ENSSLDG00000023005	apex1	99	66.456	ENSOCUG00000005022	APEX1	99	66.456	Oryctolagus_cuniculus
ENSSLDG00000023005	apex1	100	91.318	ENSORLG00000012378	apex1	100	91.318	Oryzias_latipes
ENSSLDG00000023005	apex1	100	91.318	ENSORLG00020021371	apex1	100	91.318	Oryzias_latipes_hni
ENSSLDG00000023005	apex1	100	91.318	ENSORLG00015020089	apex1	100	91.318	Oryzias_latipes_hsok
ENSSLDG00000023005	apex1	100	91.961	ENSOMEG00000018876	apex1	100	91.961	Oryzias_melastigma
ENSSLDG00000023005	apex1	99	66.456	ENSOGAG00000013335	-	88	71.326	Otolemur_garnettii
ENSSLDG00000023005	apex1	90	63.082	ENSOGAG00000029355	-	89	63.082	Otolemur_garnettii
ENSSLDG00000023005	apex1	96	62.745	ENSOARG00000001876	-	99	62.745	Ovis_aries
ENSSLDG00000023005	apex1	99	65.506	ENSOARG00000019740	-	99	65.506	Ovis_aries
ENSSLDG00000023005	apex1	96	56.291	ENSOARG00000014424	-	89	57.706	Ovis_aries
ENSSLDG00000023005	apex1	99	66.881	ENSPPAG00000038760	APEX1	89	70.251	Pan_paniscus
ENSSLDG00000023005	apex1	99	66.456	ENSPPRG00000011794	APEX1	99	66.456	Panthera_pardus
ENSSLDG00000023005	apex1	99	66.139	ENSPTIG00000014829	APEX1	99	66.139	Panthera_tigris_altaica
ENSSLDG00000023005	apex1	99	66.881	ENSPTRG00000006093	APEX1	89	70.251	Pan_troglodytes
ENSSLDG00000023005	apex1	99	66.139	ENSPANG00000022757	APEX1	88	70.609	Papio_anubis
ENSSLDG00000023005	apex1	89	85.507	ENSPKIG00000003504	apex1	99	83.333	Paramormyrops_kingsleyae
ENSSLDG00000023005	apex1	86	77.323	ENSPMGG00000016596	apex1	79	77.323	Periophthalmus_magnuspinnatus
ENSSLDG00000023005	apex1	99	66.349	ENSPEMG00000019097	Apex1	99	66.349	Peromyscus_maniculatus_bairdii
ENSSLDG00000023005	apex1	93	71.478	ENSPMAG00000007275	-	95	72.401	Petromyzon_marinus
ENSSLDG00000023005	apex1	90	68.459	ENSPCIG00000023274	APEX1	87	68.459	Phascolarctos_cinereus
ENSSLDG00000023005	apex1	100	91.290	ENSPFOG00000004178	apex1	100	91.290	Poecilia_formosa
ENSSLDG00000023005	apex1	100	90.968	ENSPLAG00000012779	apex1	100	90.968	Poecilia_latipinna
ENSSLDG00000023005	apex1	100	91.290	ENSPMEG00000019623	apex1	100	91.290	Poecilia_mexicana
ENSSLDG00000023005	apex1	100	90.645	ENSPREG00000014298	apex1	99	90.645	Poecilia_reticulata
ENSSLDG00000023005	apex1	99	65.190	ENSPPYG00000005565	APEX1	88	69.892	Pongo_abelii
ENSSLDG00000023005	apex1	99	64.557	ENSPCAG00000010376	APEX1	99	64.557	Procavia_capensis
ENSSLDG00000023005	apex1	99	65.190	ENSPCOG00000021564	APEX1	99	65.190	Propithecus_coquereli
ENSSLDG00000023005	apex1	99	64.465	ENSPVAG00000010736	APEX1	87	69.892	Pteropus_vampyrus
ENSSLDG00000023005	apex1	100	90.323	ENSPNYG00000023940	apex1	100	90.323	Pundamilia_nyererei
ENSSLDG00000023005	apex1	92	85.315	ENSPNAG00000020897	apex1	96	85.263	Pygocentrus_nattereri
ENSSLDG00000023005	apex1	99	66.667	ENSRNOG00000009663	Apex1	99	66.667	Rattus_norvegicus
ENSSLDG00000023005	apex1	99	65.823	ENSRBIG00000038325	APEX1	87	70.251	Rhinopithecus_bieti
ENSSLDG00000023005	apex1	99	58.710	ENSSBOG00000031372	-	91	61.290	Saimiri_boliviensis_boliviensis
ENSSLDG00000023005	apex1	99	66.456	ENSSBOG00000018921	-	99	66.456	Saimiri_boliviensis_boliviensis
ENSSLDG00000023005	apex1	100	63.057	ENSSHAG00000013524	APEX1	97	63.057	Sarcophilus_harrisii
ENSSLDG00000023005	apex1	99	78.710	ENSSFOG00015001948	apex1	99	81.290	Scleropages_formosus
ENSSLDG00000023005	apex1	100	89.524	ENSSMAG00000013348	apex1	100	90.159	Scophthalmus_maximus
ENSSLDG00000023005	apex1	100	98.387	ENSSDUG00000016377	apex1	99	98.387	Seriola_dumerili
ENSSLDG00000023005	apex1	90	73.571	ENSSPUG00000000531	APEX1	94	73.477	Sphenodon_punctatus
ENSSLDG00000023005	apex1	100	87.742	ENSSPAG00000000458	apex1	100	87.742	Stegastes_partitus
ENSSLDG00000023005	apex1	99	66.139	ENSSSCG00000040060	-	99	66.139	Sus_scrofa
ENSSLDG00000023005	apex1	95	39.274	ENSSSCG00000039705	-	89	40.794	Sus_scrofa
ENSSLDG00000023005	apex1	76	57.872	ENSTGUG00000014378	APEX1	100	57.872	Taeniopygia_guttata
ENSSLDG00000023005	apex1	100	83.067	ENSTRUG00000004268	apex1	95	84.345	Takifugu_rubripes
ENSSLDG00000023005	apex1	100	84.839	ENSTNIG00000005778	apex1	100	84.839	Tetraodon_nigroviridis
ENSSLDG00000023005	apex1	99	62.975	ENSTBEG00000006405	APEX1	99	62.975	Tupaia_belangeri
ENSSLDG00000023005	apex1	76	68.511	ENSTTRG00000007860	APEX1	100	68.511	Tursiops_truncatus
ENSSLDG00000023005	apex1	99	65.506	ENSUAMG00000010457	APEX1	99	65.506	Ursus_americanus
ENSSLDG00000023005	apex1	99	65.506	ENSUMAG00000009178	APEX1	99	65.506	Ursus_maritimus
ENSSLDG00000023005	apex1	76	64.681	ENSVPAG00000005083	APEX1	100	64.681	Vicugna_pacos
ENSSLDG00000023005	apex1	99	65.823	ENSVVUG00000009010	APEX1	99	65.823	Vulpes_vulpes
ENSSLDG00000023005	apex1	99	68.471	ENSXETG00000024773	apex1	99	68.153	Xenopus_tropicalis
ENSSLDG00000023005	apex1	100	91.290	ENSXCOG00000015233	apex1	99	91.290	Xiphophorus_couchianus
ENSSLDG00000023005	apex1	100	91.290	ENSXMAG00000006195	apex1	100	91.290	Xiphophorus_maculatus