EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000023028 (Gene tree)
Gene ID: -
Gene Symbol: lrpprc
Alias: fc13c04|im:7150924|im:7151572|wu:fc13c04|wu:fj38h02
Full Name: leucine rich pentatricopeptide repeat containing
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 56875 bases
Position: chrPEQF01099425.1:589316-646190
Accession: 111645285
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000029932	PPR	PF01535.20	3.4e-27	1	4
ENSSLDP00000029932	PPR	PF01535.20	3.4e-27	2	4
ENSSLDP00000029932	PPR	PF01535.20	3.4e-27	3	4
ENSSLDP00000029932	PPR	PF01535.20	3.4e-27	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000030829	-	1599	-	ENSSLDP00000029958	532 (aa)	-	-
ENSSLDT00000030800	-	3732	XM_023394418	ENSSLDP00000029932	1243 (aa)	XP_023250186	-

Gene Model

Click here to download ENSSLDG00000023028's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000023028's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000023028	lrpprc	100	68.647	ENSAPOG00000016610	lrpprc	100	68.317	Acanthochromis_polyacanthus
ENSSLDG00000023028	lrpprc	96	45.171	ENSAMEG00000005852	LRPPRC	99	47.179	Ailuropoda_melanoleuca
ENSSLDG00000023028	lrpprc	100	62.582	ENSACIG00000009604	lrpprc	99	56.888	Amphilophus_citrinellus
ENSSLDG00000023028	lrpprc	100	69.967	ENSAOCG00000005886	lrpprc	100	68.977	Amphiprion_ocellaris
ENSSLDG00000023028	lrpprc	100	65.347	ENSAPEG00000002937	lrpprc	100	62.741	Amphiprion_percula
ENSSLDG00000023028	lrpprc	100	54.456	ENSATEG00000010555	lrpprc	100	60.599	Anabas_testudineus
ENSSLDG00000023028	lrpprc	96	48.892	ENSACAG00000029278	LRPPRC	99	47.660	Anolis_carolinensis
ENSSLDG00000023028	lrpprc	99	48.482	ENSANAG00000027440	LRPPRC	99	42.113	Aotus_nancymaae
ENSSLDG00000023028	lrpprc	97	61.926	ENSACLG00000023712	lrpprc	99	61.625	Astatotilapia_calliptera
ENSSLDG00000023028	lrpprc	99	44.043	ENSCJAG00000000794	LRPPRC	99	43.901	Callithrix_jacchus
ENSSLDG00000023028	lrpprc	99	45.657	ENSCHIG00000020173	LRPPRC	99	45.624	Capra_hircus
ENSSLDG00000023028	lrpprc	96	41.660	ENSCAPG00000013631	LRPPRC	99	41.418	Cavia_aperea
ENSSLDG00000023028	lrpprc	85	43.496	ENSCPOG00000000204	LRPPRC	99	43.270	Cavia_porcellus
ENSSLDG00000023028	lrpprc	99	46.840	ENSCCAG00000031900	LRPPRC	99	40.808	Cebus_capucinus
ENSSLDG00000023028	lrpprc	75	48.035	ENSCATG00000014187	LRPPRC	93	45.908	Cercocebus_atys
ENSSLDG00000023028	lrpprc	99	43.763	ENSCLAG00000005203	LRPPRC	99	43.621	Chinchilla_lanigera
ENSSLDG00000023028	lrpprc	75	48.134	ENSCSAG00000013233	LRPPRC	99	42.079	Chlorocebus_sabaeus
ENSSLDG00000023028	lrpprc	86	43.991	ENSCHOG00000003631	LRPPRC	84	43.941	Choloepus_hoffmanni
ENSSLDG00000023028	lrpprc	96	42.050	ENSCANG00000034961	LRPPRC	99	41.499	Colobus_angolensis_palliatus
ENSSLDG00000023028	lrpprc	99	43.808	ENSCGRG00001016261	Lrpprc	99	43.652	Cricetulus_griseus_chok1gshd
ENSSLDG00000023028	lrpprc	99	43.808	ENSCGRG00000004072	Lrpprc	99	43.652	Cricetulus_griseus_crigri
ENSSLDG00000023028	lrpprc	99	50.515	ENSCSEG00000003850	lrpprc	96	50.369	Cynoglossus_semilaevis
ENSSLDG00000023028	lrpprc	100	61.582	ENSCVAG00000012967	lrpprc	100	58.922	Cyprinodon_variegatus
ENSSLDG00000023028	lrpprc	99	48.304	ENSDARG00000043970	lrpprc	98	48.017	Danio_rerio
ENSSLDG00000023028	lrpprc	99	45.702	ENSDNOG00000012594	-	99	45.741	Dasypus_novemcinctus
ENSSLDG00000023028	lrpprc	81	35.839	ENSDNOG00000032336	-	98	34.699	Dasypus_novemcinctus
ENSSLDG00000023028	lrpprc	99	44.713	ENSDORG00000012233	Lrpprc	99	43.001	Dipodomys_ordii
ENSSLDG00000023028	lrpprc	99	44.756	ENSETEG00000006657	LRPPRC	99	44.524	Echinops_telfairi
ENSSLDG00000023028	lrpprc	79	43.896	ENSEEUG00000012340	LRPPRC	71	56.684	Erinaceus_europaeus
ENSSLDG00000023028	lrpprc	97	56.977	ENSELUG00000012803	lrpprc	92	72.078	Esox_lucius
ENSSLDG00000023028	lrpprc	99	45.487	ENSFCAG00000013468	LRPPRC	99	45.143	Felis_catus
ENSSLDG00000023028	lrpprc	95	43.139	ENSFALG00000012738	LRPPRC	98	42.803	Ficedula_albicollis
ENSSLDG00000023028	lrpprc	99	42.867	ENSFDAG00000015328	LRPPRC	99	42.705	Fukomys_damarensis
ENSSLDG00000023028	lrpprc	100	60.504	ENSFHEG00000019604	lrpprc	100	56.025	Fundulus_heteroclitus
ENSSLDG00000023028	lrpprc	99	55.693	ENSGMOG00000008337	lrpprc	99	55.402	Gadus_morhua
ENSSLDG00000023028	lrpprc	99	66.781	ENSGAFG00000001455	lrpprc	99	65.753	Gambusia_affinis
ENSSLDG00000023028	lrpprc	99	56.901	ENSGACG00000010679	lrpprc	99	57.195	Gasterosteus_aculeatus
ENSSLDG00000023028	lrpprc	100	58.270	ENSHBUG00000000393	lrpprc	98	58.062	Haplochromis_burtoni
ENSSLDG00000023028	lrpprc	99	44.124	ENSHGLG00000006123	LRPPRC	99	44.171	Heterocephalus_glaber_female
ENSSLDG00000023028	lrpprc	60	47.590	ENSHGLG00100005960	-	99	47.222	Heterocephalus_glaber_male
ENSSLDG00000023028	lrpprc	97	59.438	ENSHCOG00000002107	lrpprc	100	66.667	Hippocampus_comes
ENSSLDG00000023028	lrpprc	99	50.522	ENSIPUG00000009406	lrpprc	98	53.968	Ictalurus_punctatus
ENSSLDG00000023028	lrpprc	99	44.882	ENSSTOG00000011185	LRPPRC	99	44.864	Ictidomys_tridecemlineatus
ENSSLDG00000023028	lrpprc	99	44.500	ENSJJAG00000020475	Lrpprc	99	44.000	Jaculus_jaculus
ENSSLDG00000023028	lrpprc	98	52.137	ENSKMAG00000003287	lrpprc	85	52.660	Kryptolebias_marmoratus
ENSSLDG00000023028	lrpprc	100	58.148	ENSLBEG00000023225	lrpprc	97	62.575	Labrus_bergylta
ENSSLDG00000023028	lrpprc	100	47.536	ENSLACG00000014030	LRPPRC	100	47.157	Latimeria_chalumnae
ENSSLDG00000023028	lrpprc	98	53.846	ENSLOCG00000016390	lrpprc	97	52.797	Lepisosteus_oculatus
ENSSLDG00000023028	lrpprc	99	39.958	ENSLAFG00000008614	LRPPRC	99	40.098	Loxodonta_africana
ENSSLDG00000023028	lrpprc	55	73.874	ENSMFAG00000041560	LRPPRC	99	73.874	Macaca_fascicularis
ENSSLDG00000023028	lrpprc	55	72.973	ENSMMUG00000019841	LRPPRC	99	72.973	Macaca_mulatta
ENSSLDG00000023028	lrpprc	99	44.750	ENSMNEG00000031613	LRPPRC	99	44.573	Macaca_nemestrina
ENSSLDG00000023028	lrpprc	97	54.129	ENSMAMG00000021835	lrpprc	98	53.675	Mastacembelus_armatus
ENSSLDG00000023028	lrpprc	100	57.498	ENSMZEG00005027379	lrpprc	99	57.291	Maylandia_zebra
ENSSLDG00000023028	lrpprc	99	43.692	ENSMAUG00000012118	Lrpprc	99	44.687	Mesocricetus_auratus
ENSSLDG00000023028	lrpprc	99	44.214	ENSMICG00000010486	LRPPRC	98	47.801	Microcebus_murinus
ENSSLDG00000023028	lrpprc	99	43.948	ENSMOCG00000006048	Lrpprc	99	43.372	Microtus_ochrogaster
ENSSLDG00000023028	lrpprc	100	64.955	ENSMMOG00000007830	lrpprc	93	78.049	Mola_mola
ENSSLDG00000023028	lrpprc	96	41.813	ENSMODG00000000648	LRPPRC	99	41.520	Monodelphis_domestica
ENSSLDG00000023028	lrpprc	100	61.056	ENSMALG00000001271	lrpprc	93	74.882	Monopterus_albus
ENSSLDG00000023028	lrpprc	99	44.855	ENSMPUG00000011800	LRPPRC	99	46.205	Mustela_putorius_furo
ENSSLDG00000023028	lrpprc	99	44.452	ENSMLUG00000010575	LRPPRC	99	44.539	Myotis_lucifugus
ENSSLDG00000023028	lrpprc	99	44.437	ENSNGAG00000013069	Lrpprc	99	44.191	Nannospalax_galili
ENSSLDG00000023028	lrpprc	95	66.024	ENSNBRG00000013202	lrpprc	100	65.703	Neolamprologus_brichardi
ENSSLDG00000023028	lrpprc	99	43.614	ENSNLEG00000016782	LRPPRC	99	43.560	Nomascus_leucogenys
ENSSLDG00000023028	lrpprc	81	49.375	ENSOPRG00000016774	LRPPRC	79	49.375	Ochotona_princeps
ENSSLDG00000023028	lrpprc	99	44.246	ENSODEG00000011211	LRPPRC	99	44.128	Octodon_degus
ENSSLDG00000023028	lrpprc	100	58.685	ENSONIG00000000917	lrpprc	100	57.825	Oreochromis_niloticus
ENSSLDG00000023028	lrpprc	52	46.628	ENSOANG00000014670	-	91	47.059	Ornithorhynchus_anatinus
ENSSLDG00000023028	lrpprc	99	45.370	ENSOCUG00000015046	LRPPRC	95	45.136	Oryctolagus_cuniculus
ENSSLDG00000023028	lrpprc	100	59.317	ENSORLG00000004605	lrpprc	100	58.737	Oryzias_latipes
ENSSLDG00000023028	lrpprc	93	58.739	ENSORLG00020012536	lrpprc	99	57.744	Oryzias_latipes_hni
ENSSLDG00000023028	lrpprc	100	59.190	ENSORLG00015018270	lrpprc	100	58.916	Oryzias_latipes_hsok
ENSSLDG00000023028	lrpprc	99	44.850	ENSOGAG00000012798	LRPPRC	99	45.274	Otolemur_garnettii
ENSSLDG00000023028	lrpprc	96	43.377	ENSOARG00000006522	LRPPRC	99	42.937	Ovis_aries
ENSSLDG00000023028	lrpprc	99	44.132	ENSPPAG00000040876	LRPPRC	99	44.069	Pan_paniscus
ENSSLDG00000023028	lrpprc	99	45.533	ENSPPRG00000006578	LRPPRC	99	45.260	Panthera_pardus
ENSSLDG00000023028	lrpprc	97	45.870	ENSPTIG00000000933	LRPPRC	97	45.368	Panthera_tigris_altaica
ENSSLDG00000023028	lrpprc	99	44.078	ENSPTRG00000011880	LRPPRC	99	43.808	Pan_troglodytes
ENSSLDG00000023028	lrpprc	99	41.726	ENSPANG00000020731	LRPPRC	93	45.709	Papio_anubis
ENSSLDG00000023028	lrpprc	96	46.843	ENSPKIG00000022232	lrpprc	98	46.631	Paramormyrops_kingsleyae
ENSSLDG00000023028	lrpprc	61	50.714	ENSPSIG00000006830	-	96	51.310	Pelodiscus_sinensis
ENSSLDG00000023028	lrpprc	66	67.881	ENSPMGG00000016597	lrpprc	97	67.881	Periophthalmus_magnuspinnatus
ENSSLDG00000023028	lrpprc	94	39.392	ENSPMAG00000002147	lrpprc	99	39.058	Petromyzon_marinus
ENSSLDG00000023028	lrpprc	99	64.164	ENSPFOG00000011227	lrpprc	99	63.140	Poecilia_formosa
ENSSLDG00000023028	lrpprc	99	63.823	ENSPLAG00000004018	lrpprc	99	62.799	Poecilia_latipinna
ENSSLDG00000023028	lrpprc	99	58.204	ENSPMEG00000016425	lrpprc	99	61.513	Poecilia_mexicana
ENSSLDG00000023028	lrpprc	99	65.862	ENSPREG00000003662	lrpprc	99	64.828	Poecilia_reticulata
ENSSLDG00000023028	lrpprc	58	45.797	ENSPPYG00000029532	-	99	45.420	Pongo_abelii
ENSSLDG00000023028	lrpprc	82	44.711	ENSPCAG00000001430	LRPPRC	79	43.945	Procavia_capensis
ENSSLDG00000023028	lrpprc	99	43.348	ENSPVAG00000002007	LRPPRC	99	43.599	Pteropus_vampyrus
ENSSLDG00000023028	lrpprc	100	59.912	ENSPNYG00000000756	lrpprc	100	59.620	Pundamilia_nyererei
ENSSLDG00000023028	lrpprc	99	59.866	ENSPNAG00000002895	lrpprc	99	59.727	Pygocentrus_nattereri
ENSSLDG00000023028	lrpprc	99	43.692	ENSRNOG00000005877	Lrpprc	99	44.261	Rattus_norvegicus
ENSSLDG00000023028	lrpprc	99	43.509	ENSRBIG00000031552	LRPPRC	99	41.292	Rhinopithecus_bieti
ENSSLDG00000023028	lrpprc	99	43.398	ENSSBOG00000011807	LRPPRC	99	41.931	Saimiri_boliviensis_boliviensis
ENSSLDG00000023028	lrpprc	96	42.985	ENSSHAG00000018725	LRPPRC	99	42.783	Sarcophilus_harrisii
ENSSLDG00000023028	lrpprc	97	51.515	ENSSFOG00015001042	lrpprc	92	50.505	Scleropages_formosus
ENSSLDG00000023028	lrpprc	100	79.076	ENSSDUG00000019062	lrpprc	99	78.175	Seriola_dumerili
ENSSLDG00000023028	lrpprc	86	44.949	ENSSARG00000000426	LRPPRC	95	46.208	Sorex_araneus
ENSSLDG00000023028	lrpprc	100	63.696	ENSSPAG00000000162	lrpprc	100	62.376	Stegastes_partitus
ENSSLDG00000023028	lrpprc	99	45.500	ENSSSCG00000008452	LRPPRC	99	45.337	Sus_scrofa
ENSSLDG00000023028	lrpprc	94	42.029	ENSTGUG00000003759	LRPPRC	99	41.838	Taeniopygia_guttata
ENSSLDG00000023028	lrpprc	91	55.042	ENSTRUG00000008409	lrpprc	96	54.829	Takifugu_rubripes
ENSSLDG00000023028	lrpprc	99	60.244	ENSTNIG00000007470	lrpprc	100	55.969	Tetraodon_nigroviridis
ENSSLDG00000023028	lrpprc	99	43.092	ENSTTRG00000006403	LRPPRC	99	42.990	Tursiops_truncatus
ENSSLDG00000023028	lrpprc	88	57.895	ENSVPAG00000008993	LRPPRC	85	57.895	Vicugna_pacos
ENSSLDG00000023028	lrpprc	98	50.831	ENSXETG00000009296	lrpprc	99	48.464	Xenopus_tropicalis
ENSSLDG00000023028	lrpprc	98	57.684	ENSXCOG00000013343	lrpprc	96	61.680	Xiphophorus_couchianus
ENSSLDG00000023028	lrpprc	99	53.606	ENSXMAG00000018108	lrpprc	99	53.467	Xiphophorus_maculatus