EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000023060 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 8848 bases
Position: chrPEQF01099304.1:472905-481752
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000029912	zf-C2H2	PF00096.26	4.3e-44	1	7
ENSSLDP00000029912	zf-C2H2	PF00096.26	4.3e-44	2	7
ENSSLDP00000029912	zf-C2H2	PF00096.26	4.3e-44	3	7
ENSSLDP00000029912	zf-C2H2	PF00096.26	4.3e-44	4	7
ENSSLDP00000029912	zf-C2H2	PF00096.26	4.3e-44	5	7
ENSSLDP00000029912	zf-C2H2	PF00096.26	4.3e-44	6	7
ENSSLDP00000029912	zf-C2H2	PF00096.26	4.3e-44	7	7
ENSSLDP00000029912	zf-met	PF12874.7	1.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000030781	-	1143	-	ENSSLDP00000029912	380 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000023060's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000023060's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000023060	-	73	42.857	ENSSLDG00000001787	zbtb24	94	41.860
ENSSLDG00000023060	-	79	47.561	ENSSLDG00000025265	znf526	53	47.561
ENSSLDG00000023060	-	70	41.429	ENSSLDG00000000203	-	80	43.182
ENSSLDG00000023060	-	74	47.024	ENSSLDG00000006994	-	96	35.659
ENSSLDG00000023060	-	78	32.394	ENSSLDG00000016301	-	92	32.394
ENSSLDG00000023060	-	69	40.805	ENSSLDG00000001860	-	83	36.134
ENSSLDG00000023060	-	73	30.804	ENSSLDG00000019660	znf341	50	34.234
ENSSLDG00000023060	-	71	40.594	ENSSLDG00000004005	-	62	40.594
ENSSLDG00000023060	-	79	44.444	ENSSLDG00000012133	-	80	46.448
ENSSLDG00000023060	-	77	40.719	ENSSLDG00000005839	-	60	42.353
ENSSLDG00000023060	-	69	43.814	ENSSLDG00000010390	-	83	39.080
ENSSLDG00000023060	-	70	45.238	ENSSLDG00000020655	-	57	43.750
ENSSLDG00000023060	-	51	42.308	ENSSLDG00000011412	snai1a	60	38.679
ENSSLDG00000023060	-	74	43.750	ENSSLDG00000020432	-	89	43.750
ENSSLDG00000023060	-	83	45.294	ENSSLDG00000007756	-	98	42.857
ENSSLDG00000023060	-	70	43.787	ENSSLDG00000016317	-	85	43.275
ENSSLDG00000023060	-	69	40.964	ENSSLDG00000023661	-	81	40.964
ENSSLDG00000023060	-	69	44.444	ENSSLDG00000006724	-	93	44.444
ENSSLDG00000023060	-	71	43.299	ENSSLDG00000013353	prdm5	76	43.750
ENSSLDG00000023060	-	80	33.663	ENSSLDG00000018273	-	85	43.357
ENSSLDG00000023060	-	70	47.253	ENSSLDG00000009582	-	95	47.253
ENSSLDG00000023060	-	72	46.763	ENSSLDG00000005868	-	82	46.104
ENSSLDG00000023060	-	70	38.462	ENSSLDG00000004485	-	68	38.071
ENSSLDG00000023060	-	70	45.977	ENSSLDG00000008645	-	99	45.977
ENSSLDG00000023060	-	72	39.130	ENSSLDG00000002756	-	83	39.130
ENSSLDG00000023060	-	72	36.493	ENSSLDG00000000457	-	79	42.353
ENSSLDG00000023060	-	76	33.488	ENSSLDG00000014177	zbtb47b	67	35.859
ENSSLDG00000023060	-	77	41.290	ENSSLDG00000012036	-	96	39.623
ENSSLDG00000023060	-	80	38.365	ENSSLDG00000011849	-	60	36.970
ENSSLDG00000023060	-	77	42.169	ENSSLDG00000004098	-	96	42.169
ENSSLDG00000023060	-	69	38.462	ENSSLDG00000017166	scrt1b	51	38.462
ENSSLDG00000023060	-	70	45.570	ENSSLDG00000018493	-	81	45.570
ENSSLDG00000023060	-	69	42.593	ENSSLDG00000007524	-	72	40.698
ENSSLDG00000023060	-	71	36.996	ENSSLDG00000000376	-	75	36.996
ENSSLDG00000023060	-	82	44.388	ENSSLDG00000018598	-	95	44.388
ENSSLDG00000023060	-	69	41.765	ENSSLDG00000020455	-	85	41.837
ENSSLDG00000023060	-	70	43.151	ENSSLDG00000020990	-	55	43.151
ENSSLDG00000023060	-	87	40.404	ENSSLDG00000005670	-	91	40.404
ENSSLDG00000023060	-	84	40.000	ENSSLDG00000009821	-	79	40.000
ENSSLDG00000023060	-	73	36.727	ENSSLDG00000024295	ZNF319	87	39.286
ENSSLDG00000023060	-	92	44.615	ENSSLDG00000017937	-	98	45.078
ENSSLDG00000023060	-	52	41.026	ENSSLDG00000025359	-	63	41.026
ENSSLDG00000023060	-	75	38.824	ENSSLDG00000018521	znf646	60	38.824
ENSSLDG00000023060	-	69	40.625	ENSSLDG00000013823	gfi1b	57	40.625
ENSSLDG00000023060	-	72	46.763	ENSSLDG00000006217	-	80	46.104
ENSSLDG00000023060	-	70	42.857	ENSSLDG00000021278	-	60	42.857
ENSSLDG00000023060	-	51	40.541	ENSSLDG00000017614	-	98	40.541
ENSSLDG00000023060	-	51	43.697	ENSSLDG00000007801	wt1a	58	44.000
ENSSLDG00000023060	-	69	35.185	ENSSLDG00000002776	-	67	35.185
ENSSLDG00000023060	-	72	40.541	ENSSLDG00000000432	-	84	42.593
ENSSLDG00000023060	-	59	33.333	ENSSLDG00000012852	snai2	70	34.932
ENSSLDG00000023060	-	83	44.565	ENSSLDG00000013760	-	95	44.118
ENSSLDG00000023060	-	70	36.364	ENSSLDG00000017718	zbtb48	54	36.869
ENSSLDG00000023060	-	70	42.408	ENSSLDG00000001850	-	57	42.408
ENSSLDG00000023060	-	70	34.981	ENSSLDG00000000352	-	64	34.981
ENSSLDG00000023060	-	70	44.828	ENSSLDG00000009061	-	92	39.007
ENSSLDG00000023060	-	78	44.295	ENSSLDG00000010190	-	74	44.295
ENSSLDG00000023060	-	76	37.838	ENSSLDG00000020727	-	96	40.984
ENSSLDG00000023060	-	75	47.668	ENSSLDG00000020675	-	98	47.179
ENSSLDG00000023060	-	74	35.000	ENSSLDG00000014436	-	73	35.000
ENSSLDG00000023060	-	51	41.333	ENSSLDG00000015049	-	99	41.333
ENSSLDG00000023060	-	76	40.659	ENSSLDG00000000859	-	95	35.814
ENSSLDG00000023060	-	70	44.521	ENSSLDG00000018033	-	56	44.521
ENSSLDG00000023060	-	70	30.833	ENSSLDG00000015796	-	67	30.833
ENSSLDG00000023060	-	68	39.189	ENSSLDG00000002515	-	72	37.342
ENSSLDG00000023060	-	68	44.211	ENSSLDG00000000202	-	74	44.211
ENSSLDG00000023060	-	73	49.091	ENSSLDG00000006288	-	92	46.995
ENSSLDG00000023060	-	70	44.920	ENSSLDG00000012320	-	95	44.920
ENSSLDG00000023060	-	84	32.683	ENSSLDG00000003269	znf710b	59	32.683
ENSSLDG00000023060	-	70	42.857	ENSSLDG00000007568	-	72	42.857
ENSSLDG00000023060	-	70	43.878	ENSSLDG00000004756	-	91	43.878
ENSSLDG00000023060	-	75	41.520	ENSSLDG00000015116	-	75	38.967
ENSSLDG00000023060	-	69	45.783	ENSSLDG00000013170	zbtb17	87	45.783
ENSSLDG00000023060	-	86	38.007	ENSSLDG00000014166	znf319b	82	36.531
ENSSLDG00000023060	-	54	33.333	ENSSLDG00000016454	-	52	33.333
ENSSLDG00000023060	-	79	41.538	ENSSLDG00000005850	-	93	44.809
ENSSLDG00000023060	-	87	42.727	ENSSLDG00000012821	znf236	64	42.727

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000023060	-	72	74.346	ENSG00000197483	ZNF628	84	75.714	Homo_sapiens
ENSSLDG00000023060	-	81	61.692	ENSAPOG00000023504	-	69	55.789	Acanthochromis_polyacanthus
ENSSLDG00000023060	-	70	66.467	ENSAMEG00000003482	ZNF628	56	66.467	Ailuropoda_melanoleuca
ENSSLDG00000023060	-	80	55.479	ENSACAG00000011023	ZNF628	64	55.479	Anolis_carolinensis
ENSSLDG00000023060	-	72	74.346	ENSCJAG00000040315	ZNF628	60	72.222	Callithrix_jacchus
ENSSLDG00000023060	-	78	58.848	ENSCAFG00000032330	-	97	52.759	Canis_familiaris
ENSSLDG00000023060	-	70	74.869	ENSCAFG00020015487	ZNF628	59	75.000	Canis_lupus_dingo
ENSSLDG00000023060	-	70	74.346	ENSCHIG00000022075	ZNF628	60	73.575	Capra_hircus
ENSSLDG00000023060	-	74	71.921	ENSCCAG00000025672	ZNF628	60	72.959	Cebus_capucinus
ENSSLDG00000023060	-	73	74.346	ENSCATG00000040762	ZNF628	59	74.346	Cercocebus_atys
ENSSLDG00000023060	-	73	74.346	ENSCSAG00000019655	ZNF628	59	74.346	Chlorocebus_sabaeus
ENSSLDG00000023060	-	74	84.099	ENSCSEG00000018535	-	83	84.099	Cynoglossus_semilaevis
ENSSLDG00000023060	-	70	70.256	ENSFALG00000014367	-	95	69.458	Ficedula_albicollis
ENSSLDG00000023060	-	79	71.575	ENSGMOG00000004063	ZNF628	99	71.575	Gadus_morhua
ENSSLDG00000023060	-	78	68.506	ENSGACG00000010515	ZNF628	99	68.852	Gasterosteus_aculeatus
ENSSLDG00000023060	-	70	60.700	ENSHGLG00000015628	ZNF628	58	71.859	Heterocephalus_glaber_female
ENSSLDG00000023060	-	72	64.419	ENSHGLG00100006343	ZNF628	59	64.259	Heterocephalus_glaber_male
ENSSLDG00000023060	-	79	57.721	ENSSTOG00000026126	ZNF628	56	57.721	Ictidomys_tridecemlineatus
ENSSLDG00000023060	-	72	74.346	ENSJJAG00000000983	Zfp628	64	74.346	Jaculus_jaculus
ENSSLDG00000023060	-	69	70.755	ENSLBEG00000015264	-	75	70.755	Labrus_bergylta
ENSSLDG00000023060	-	74	73.298	ENSLAFG00000022529	ZNF628	98	61.979	Loxodonta_africana
ENSSLDG00000023060	-	73	74.346	ENSMMUG00000001770	ZNF628	57	74.346	Macaca_mulatta
ENSSLDG00000023060	-	73	74.346	ENSMNEG00000040894	ZNF628	59	74.346	Macaca_nemestrina
ENSSLDG00000023060	-	69	42.262	ENSMGAG00000016847	-	99	68.493	Meleagris_gallopavo
ENSSLDG00000023060	-	73	53.333	ENSMAUG00000003007	Zfp628	60	73.822	Mesocricetus_auratus
ENSSLDG00000023060	-	77	54.027	ENSMOCG00000020296	Zfp628	51	68.692	Microtus_ochrogaster
ENSSLDG00000023060	-	72	58.301	ENSMODG00000017494	ZNF628	55	55.634	Monodelphis_domestica
ENSSLDG00000023060	-	70	73.822	MGP_CAROLIEiJ_G0029135	Zfp628	61	73.822	Mus_caroli
ENSSLDG00000023060	-	70	73.822	ENSMUSG00000074406	Zfp628	61	73.822	Mus_musculus
ENSSLDG00000023060	-	70	73.822	MGP_PahariEiJ_G0021003	Zfp628	60	72.081	Mus_pahari
ENSSLDG00000023060	-	73	55.516	MGP_SPRETEiJ_G0030188	Zfp628	59	73.822	Mus_spretus
ENSSLDG00000023060	-	73	69.194	ENSMPUG00000020191	ZNF628	60	68.545	Mustela_putorius_furo
ENSSLDG00000023060	-	72	60.915	ENSNGAG00000012888	Zfp628	53	59.155	Nannospalax_galili
ENSSLDG00000023060	-	72	74.346	ENSNLEG00000010532	ZNF628	60	74.346	Nomascus_leucogenys
ENSSLDG00000023060	-	71	58.687	ENSMEUG00000012147	ZNF628	63	55.797	Notamacropus_eugenii
ENSSLDG00000023060	-	80	85.185	ENSONIG00000012825	-	91	82.971	Oreochromis_niloticus
ENSSLDG00000023060	-	72	64.677	ENSORLG00020006433	-	58	64.677	Oryzias_latipes_hni
ENSSLDG00000023060	-	74	73.196	ENSOGAG00000034730	ZNF628	60	73.196	Otolemur_garnettii
ENSSLDG00000023060	-	72	74.346	ENSPPAG00000033056	ZNF628	54	72.222	Pan_paniscus
ENSSLDG00000023060	-	72	74.346	ENSPTRG00000052545	ZNF628	59	72.222	Pan_troglodytes
ENSSLDG00000023060	-	79	68.647	ENSPMGG00000014604	-	69	74.265	Periophthalmus_magnuspinnatus
ENSSLDG00000023060	-	72	73.822	ENSPEMG00000009113	Zfp628	50	73.822	Peromyscus_maniculatus_bairdii
ENSSLDG00000023060	-	72	58.462	ENSPCIG00000013076	ZNF628	60	55.208	Phascolarctos_cinereus
ENSSLDG00000023060	-	76	68.246	ENSPCAG00000008589	ZNF628	71	53.512	Procavia_capensis
ENSSLDG00000023060	-	73	55.088	ENSPCOG00000026399	ZNF628	57	72.222	Propithecus_coquereli
ENSSLDG00000023060	-	73	74.346	ENSRROG00000039960	ZNF628	56	57.196	Rhinopithecus_roxellana
ENSSLDG00000023060	-	69	65.942	ENSSPAG00000021516	-	87	65.942	Stegastes_partitus
ENSSLDG00000023060	-	72	73.057	ENSSSCG00000025343	ZNF628	59	73.057	Sus_scrofa
ENSSLDG00000023060	-	70	81.749	ENSTNIG00000001164	ZNF628	92	81.749	Tetraodon_nigroviridis
ENSSLDG00000023060	-	70	74.346	ENSUAMG00000020195	ZNF628	51	74.346	Ursus_americanus
ENSSLDG00000023060	-	80	54.828	ENSXETG00000008801	znf628	99	58.427	Xenopus_tropicalis