EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000023136 (Gene tree)
Gene ID: -
Gene Symbol: slirp
Alias: sb:cb657|si:ch73-276n11.1
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 6750 bases
Position: chrPEQF01098795.1:53634-60383
Accession: 111655382
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000030006	RRM_1	PF00076.22	9.4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000030877	-	3700	XM_023406744	ENSSLDP00000030006	110 (aa)	XP_023262512	UPI000C6F8E20

Gene Model

Click here to download ENSSLDG00000023136's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000023136's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000023136	slirp	80	30.435	ENSSLDG00000005199	hnrnpaba	52	30.000
ENSSLDG00000023136	slirp	77	34.118	ENSSLDG00000024705	-	72	34.118
ENSSLDG00000023136	slirp	85	31.868	ENSSLDG00000015962	hnrnpd	53	31.868

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000023136	slirp	75	54.762	ENSG00000119705	SLIRP	92	61.429	Homo_sapiens
ENSSLDG00000023136	slirp	91	83.000	ENSAPOG00000001298	slirp	100	83.000	Acanthochromis_polyacanthus
ENSSLDG00000023136	slirp	64	61.429	ENSAMEG00000003975	SLIRP	77	61.429	Ailuropoda_melanoleuca
ENSSLDG00000023136	slirp	89	78.571	ENSACIG00000023083	slirp	97	78.571	Amphilophus_citrinellus
ENSSLDG00000023136	slirp	89	82.653	ENSAOCG00000006342	slirp	99	82.653	Amphiprion_ocellaris
ENSSLDG00000023136	slirp	89	82.653	ENSAPEG00000015917	slirp	99	82.653	Amphiprion_percula
ENSSLDG00000023136	slirp	88	82.474	ENSAPEG00000015719	-	99	82.474	Amphiprion_percula
ENSSLDG00000023136	slirp	91	73.000	ENSATEG00000013525	slirp	100	73.000	Anabas_testudineus
ENSSLDG00000023136	slirp	89	62.245	ENSAMXG00000018693	slirp	98	62.245	Astyanax_mexicanus
ENSSLDG00000023136	slirp	76	54.762	ENSCJAG00000016946	SLIRP	85	54.762	Callithrix_jacchus
ENSSLDG00000023136	slirp	79	56.180	ENSCAFG00020015876	-	80	56.180	Canis_lupus_dingo
ENSSLDG00000023136	slirp	79	52.874	ENSCCAG00000030130	SLIRP	69	62.162	Cebus_capucinus
ENSSLDG00000023136	slirp	77	55.172	ENSCATG00000036327	SLIRP	80	55.172	Cercocebus_atys
ENSSLDG00000023136	slirp	67	60.811	ENSCSAG00000011736	SLIRP	68	60.811	Chlorocebus_sabaeus
ENSSLDG00000023136	slirp	74	60.494	ENSCPBG00000026327	SLIRP	82	60.494	Chrysemys_picta_bellii
ENSSLDG00000023136	slirp	68	61.842	ENSCANG00000032892	SLIRP	68	65.672	Colobus_angolensis_palliatus
ENSSLDG00000023136	slirp	80	50.000	ENSCGRG00001024068	Slirp	81	50.000	Cricetulus_griseus_chok1gshd
ENSSLDG00000023136	slirp	80	50.000	ENSCGRG00000017440	Slirp	81	50.000	Cricetulus_griseus_crigri
ENSSLDG00000023136	slirp	76	64.286	ENSCSEG00000015766	slirp	86	64.286	Cynoglossus_semilaevis
ENSSLDG00000023136	slirp	82	77.778	ENSCVAG00000012504	slirp	86	77.778	Cyprinodon_variegatus
ENSSLDG00000023136	slirp	85	73.404	ENSDARG00000097753	slirp	94	73.196	Danio_rerio
ENSSLDG00000023136	slirp	85	46.809	ENSDNOG00000007721	SLIRP	97	42.991	Dasypus_novemcinctus
ENSSLDG00000023136	slirp	69	56.579	ENSDORG00000012379	Slirp	68	56.579	Dipodomys_ordii
ENSSLDG00000023136	slirp	69	52.632	ENSETEG00000010345	SLIRP	70	52.632	Echinops_telfairi
ENSSLDG00000023136	slirp	81	55.056	ENSEASG00005020193	SLIRP	80	55.056	Equus_asinus_asinus
ENSSLDG00000023136	slirp	80	49.438	ENSEEUG00000007257	SLIRP	88	49.438	Erinaceus_europaeus
ENSSLDG00000023136	slirp	87	76.042	ENSELUG00000016800	slirp	95	76.042	Esox_lucius
ENSSLDG00000023136	slirp	62	61.765	ENSFCAG00000036326	SLIRP	69	61.765	Felis_catus
ENSSLDG00000023136	slirp	71	52.564	ENSFALG00000012583	SLIRP	85	48.889	Ficedula_albicollis
ENSSLDG00000023136	slirp	77	55.172	ENSFDAG00000008347	SLIRP	77	55.172	Fukomys_damarensis
ENSSLDG00000023136	slirp	71	79.487	ENSFHEG00000004709	slirp	85	79.487	Fundulus_heteroclitus
ENSSLDG00000023136	slirp	88	80.412	ENSGMOG00000016948	slirp	93	80.412	Gadus_morhua
ENSSLDG00000023136	slirp	76	52.326	ENSGALG00000031238	SLIRP	87	52.326	Gallus_gallus
ENSSLDG00000023136	slirp	91	77.000	ENSGAFG00000010998	slirp	100	77.000	Gambusia_affinis
ENSSLDG00000023136	slirp	75	89.157	ENSGACG00000020137	slirp	97	89.157	Gasterosteus_aculeatus
ENSSLDG00000023136	slirp	85	62.766	ENSGAGG00000009953	SLIRP	65	62.766	Gopherus_agassizii
ENSSLDG00000023136	slirp	75	54.762	ENSGGOG00000011059	-	73	61.765	Gorilla_gorilla
ENSSLDG00000023136	slirp	81	48.315	ENSHGLG00000018491	SLIRP	80	48.315	Heterocephalus_glaber_female
ENSSLDG00000023136	slirp	81	48.315	ENSHGLG00100014153	SLIRP	80	48.315	Heterocephalus_glaber_male
ENSSLDG00000023136	slirp	87	80.208	ENSHCOG00000006795	slirp	97	80.208	Hippocampus_comes
ENSSLDG00000023136	slirp	89	72.449	ENSIPUG00000010214	SLIRP	98	72.449	Ictalurus_punctatus
ENSSLDG00000023136	slirp	82	52.222	ENSSTOG00000034316	SLIRP	81	52.222	Ictidomys_tridecemlineatus
ENSSLDG00000023136	slirp	91	65.000	ENSKMAG00000002038	slirp	96	65.000	Kryptolebias_marmoratus
ENSSLDG00000023136	slirp	91	73.000	ENSLBEG00000007564	slirp	100	73.000	Labrus_bergylta
ENSSLDG00000023136	slirp	88	70.103	ENSLACG00000013434	SLIRP	93	70.103	Latimeria_chalumnae
ENSSLDG00000023136	slirp	67	60.811	ENSMFAG00000042960	SLIRP	72	62.687	Macaca_fascicularis
ENSSLDG00000023136	slirp	77	55.294	ENSMMUG00000029256	SLIRP	72	62.687	Macaca_mulatta
ENSSLDG00000023136	slirp	67	60.811	ENSMNEG00000028921	SLIRP	72	62.687	Macaca_nemestrina
ENSSLDG00000023136	slirp	62	61.765	ENSMLEG00000043644	SLIRP	68	62.687	Mandrillus_leucophaeus
ENSSLDG00000023136	slirp	89	83.673	ENSMZEG00005004617	slirp	99	83.673	Maylandia_zebra
ENSSLDG00000023136	slirp	81	51.685	ENSMAUG00000003857	Slirp	80	51.685	Mesocricetus_auratus
ENSSLDG00000023136	slirp	98	49.074	ENSMICG00000012080	SLIRP	93	49.074	Microcebus_murinus
ENSSLDG00000023136	slirp	65	61.111	ENSMOCG00000016019	Slirp	69	60.000	Microtus_ochrogaster
ENSSLDG00000023136	slirp	91	81.000	ENSMMOG00000018268	slirp	100	81.000	Mola_mola
ENSSLDG00000023136	slirp	64	55.714	ENSMODG00000005207	-	99	55.714	Monodelphis_domestica
ENSSLDG00000023136	slirp	91	76.000	ENSMALG00000012581	slirp	100	76.000	Monopterus_albus
ENSSLDG00000023136	slirp	78	53.409	MGP_CAROLIEiJ_G0017995	Slirp	81	53.409	Mus_caroli
ENSSLDG00000023136	slirp	68	60.000	ENSMUSG00000021040	Slirp	71	60.000	Mus_musculus
ENSSLDG00000023136	slirp	68	60.000	MGP_SPRETEiJ_G0018840	Slirp	67	60.000	Mus_spretus
ENSSLDG00000023136	slirp	80	52.273	ENSMLUG00000024998	-	79	52.273	Myotis_lucifugus
ENSSLDG00000023136	slirp	76	55.952	ENSMLUG00000029544	-	67	58.667	Myotis_lucifugus
ENSSLDG00000023136	slirp	67	55.405	ENSNGAG00000016363	Slirp	71	55.405	Nannospalax_galili
ENSSLDG00000023136	slirp	68	56.000	ENSNLEG00000027238	-	80	57.143	Nomascus_leucogenys
ENSSLDG00000023136	slirp	91	46.535	ENSNLEG00000032459	-	86	50.588	Nomascus_leucogenys
ENSSLDG00000023136	slirp	67	59.459	ENSODEG00000012580	SLIRP	76	60.000	Octodon_degus
ENSSLDG00000023136	slirp	89	84.694	ENSONIG00000011692	slirp	99	84.694	Oreochromis_niloticus
ENSSLDG00000023136	slirp	100	50.000	ENSOANG00000022366	SLIRP	99	50.000	Ornithorhynchus_anatinus
ENSSLDG00000023136	slirp	94	79.612	ENSORLG00000010761	slirp	80	79.612	Oryzias_latipes
ENSSLDG00000023136	slirp	91	82.000	ENSORLG00020022188	slirp	100	82.000	Oryzias_latipes_hni
ENSSLDG00000023136	slirp	90	80.808	ENSORLG00015020171	slirp	98	80.808	Oryzias_latipes_hsok
ENSSLDG00000023136	slirp	91	82.000	ENSOMEG00000019321	slirp	100	82.000	Oryzias_melastigma
ENSSLDG00000023136	slirp	75	54.762	ENSPPAG00000040710	-	73	61.765	Pan_paniscus
ENSSLDG00000023136	slirp	62	61.765	ENSPPRG00000014350	SLIRP	69	61.765	Panthera_pardus
ENSSLDG00000023136	slirp	62	61.765	ENSPTIG00000014196	SLIRP	69	61.765	Panthera_tigris_altaica
ENSSLDG00000023136	slirp	75	54.762	ENSPTRG00000030691	SLIRP	73	61.765	Pan_troglodytes
ENSSLDG00000023136	slirp	75	57.647	ENSPANG00000026323	SLIRP	72	64.179	Papio_anubis
ENSSLDG00000023136	slirp	60	74.242	ENSPKIG00000008831	slirp	65	74.242	Paramormyrops_kingsleyae
ENSSLDG00000023136	slirp	73	81.250	ENSPMGG00000010541	slirp	92	81.250	Periophthalmus_magnuspinnatus
ENSSLDG00000023136	slirp	80	50.562	ENSPEMG00000013234	Slirp	78	50.562	Peromyscus_maniculatus_bairdii
ENSSLDG00000023136	slirp	79	51.724	ENSPMAG00000009355	slirp	97	51.724	Petromyzon_marinus
ENSSLDG00000023136	slirp	72	48.101	ENSPCIG00000026842	-	85	48.101	Phascolarctos_cinereus
ENSSLDG00000023136	slirp	89	78.571	ENSPFOG00000006758	slirp	98	78.571	Poecilia_formosa
ENSSLDG00000023136	slirp	89	77.551	ENSPLAG00000011140	slirp	98	77.551	Poecilia_latipinna
ENSSLDG00000023136	slirp	89	78.571	ENSPMEG00000019535	slirp	98	78.571	Poecilia_mexicana
ENSSLDG00000023136	slirp	89	77.551	ENSPREG00000011673	slirp	98	77.551	Poecilia_reticulata
ENSSLDG00000023136	slirp	77	55.172	ENSPPYG00000006030	SLIRP	81	54.545	Pongo_abelii
ENSSLDG00000023136	slirp	68	57.333	ENSPCOG00000015159	SLIRP	65	58.571	Propithecus_coquereli
ENSSLDG00000023136	slirp	89	78.571	ENSPNAG00000008633	slirp	99	78.571	Pygocentrus_nattereri
ENSSLDG00000023136	slirp	67	63.514	ENSRBIG00000032222	-	72	64.179	Rhinopithecus_bieti
ENSSLDG00000023136	slirp	59	64.615	ENSRBIG00000031396	-	65	64.615	Rhinopithecus_bieti
ENSSLDG00000023136	slirp	67	58.108	ENSRBIG00000035817	-	68	58.108	Rhinopithecus_bieti
ENSSLDG00000023136	slirp	61	62.687	ENSRBIG00000032998	-	62	62.687	Rhinopithecus_bieti
ENSSLDG00000023136	slirp	67	63.514	ENSRROG00000036656	-	72	64.179	Rhinopithecus_roxellana
ENSSLDG00000023136	slirp	65	64.789	ENSRROG00000041312	-	70	64.789	Rhinopithecus_roxellana
ENSSLDG00000023136	slirp	61	64.179	ENSRROG00000017133	-	70	64.179	Rhinopithecus_roxellana
ENSSLDG00000023136	slirp	59	66.154	ENSRROG00000035604	-	65	66.154	Rhinopithecus_roxellana
ENSSLDG00000023136	slirp	75	55.952	ENSSBOG00000020014	SLIRP	72	64.179	Saimiri_boliviensis_boliviensis
ENSSLDG00000023136	slirp	77	68.235	ENSSFOG00015011165	slirp	86	68.235	Scleropages_formosus
ENSSLDG00000023136	slirp	91	52.941	ENSSMAG00000012930	slirp	100	52.941	Scophthalmus_maximus
ENSSLDG00000023136	slirp	100	97.273	ENSSDUG00000021883	slirp	72	97.273	Seriola_dumerili
ENSSLDG00000023136	slirp	83	57.732	ENSSPUG00000009346	SLIRP	99	57.732	Sphenodon_punctatus
ENSSLDG00000023136	slirp	91	73.000	ENSSPAG00000013477	slirp	100	73.000	Stegastes_partitus
ENSSLDG00000023136	slirp	97	48.598	ENSSSCG00000028167	SLIRP	92	48.598	Sus_scrofa
ENSSLDG00000023136	slirp	71	53.846	ENSTGUG00000012337	SLIRP	87	47.826	Taeniopygia_guttata
ENSSLDG00000023136	slirp	89	79.798	ENSTRUG00000020127	slirp	98	79.798	Takifugu_rubripes
ENSSLDG00000023136	slirp	67	62.162	ENSUAMG00000022445	SLIRP	67	62.162	Ursus_americanus
ENSSLDG00000023136	slirp	81	55.056	ENSUMAG00000007166	SLIRP	80	55.056	Ursus_maritimus
ENSSLDG00000023136	slirp	90	52.000	ENSVPAG00000001781	SLIRP	88	52.000	Vicugna_pacos
ENSSLDG00000023136	slirp	80	54.444	ENSVVUG00000004436	SLIRP	81	54.444	Vulpes_vulpes
ENSSLDG00000023136	slirp	75	73.171	ENSXETG00000030343	SLIRP	92	73.171	Xenopus_tropicalis
ENSSLDG00000023136	slirp	91	77.000	ENSXCOG00000009422	slirp	100	77.000	Xiphophorus_couchianus
ENSSLDG00000023136	slirp	91	79.000	ENSXMAG00000015655	slirp	100	79.000	Xiphophorus_maculatus