EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000023179 (Gene tree)
Gene ID: -
Gene Symbol: urb1
Alias: mp:zf637-1-000544|zf637-1-000544
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 14892 bases
Position: chrPEQF01098892.1:75178-90069
Accession: 111657807
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000030058	Npa1	PF11707.8	4.8e-84	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000030929	-	8139	XM_023410124	ENSSLDP00000030058	2260 (aa)	XP_023265892	UPI000C6F76B3

Gene Model

Click here to download ENSSLDG00000023179's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000023179's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000023179	urb1	99	44.585	ENSG00000142207	URB1	99	44.710	Homo_sapiens
ENSSLDG00000023179	urb1	97	81.201	ENSAPOG00000020308	urb1	99	81.201	Acanthochromis_polyacanthus
ENSSLDG00000023179	urb1	99	44.826	ENSAMEG00000011998	URB1	99	44.961	Ailuropoda_melanoleuca
ENSSLDG00000023179	urb1	98	72.315	ENSACIG00000003248	urb1	99	72.315	Amphilophus_citrinellus
ENSSLDG00000023179	urb1	99	72.247	ENSAOCG00000010364	urb1	100	72.247	Amphiprion_ocellaris
ENSSLDG00000023179	urb1	97	81.152	ENSAPEG00000010758	urb1	100	81.152	Amphiprion_percula
ENSSLDG00000023179	urb1	99	81.130	ENSATEG00000011790	urb1	100	81.130	Anabas_testudineus
ENSSLDG00000023179	urb1	97	46.888	ENSAPLG00000012791	URB1	99	47.170	Anas_platyrhynchos
ENSSLDG00000023179	urb1	99	45.368	ENSACAG00000002817	URB1	99	45.581	Anolis_carolinensis
ENSSLDG00000023179	urb1	99	44.817	ENSANAG00000024617	URB1	99	44.817	Aotus_nancymaae
ENSSLDG00000023179	urb1	99	78.486	ENSACLG00000024865	urb1	100	78.486	Astatotilapia_calliptera
ENSSLDG00000023179	urb1	99	50.000	ENSAMXG00000012306	urb1	99	50.000	Astyanax_mexicanus
ENSSLDG00000023179	urb1	99	44.030	ENSBTAG00000012412	URB1	99	44.203	Bos_taurus
ENSSLDG00000023179	urb1	99	44.706	ENSCJAG00000009118	URB1	99	44.580	Callithrix_jacchus
ENSSLDG00000023179	urb1	99	44.522	ENSCAFG00000008892	URB1	99	44.522	Canis_familiaris
ENSSLDG00000023179	urb1	99	44.241	ENSCAFG00020025987	-	99	44.279	Canis_lupus_dingo
ENSSLDG00000023179	urb1	99	43.785	ENSCAFG00020025994	-	99	43.785	Canis_lupus_dingo
ENSSLDG00000023179	urb1	99	44.522	ENSCHIG00000015645	URB1	99	44.522	Capra_hircus
ENSSLDG00000023179	urb1	99	44.792	ENSTSYG00000013286	URB1	99	44.835	Carlito_syrichta
ENSSLDG00000023179	urb1	98	44.078	ENSCAPG00000015589	URB1	99	44.078	Cavia_aperea
ENSSLDG00000023179	urb1	99	44.595	ENSCPOG00000006748	URB1	99	44.595	Cavia_porcellus
ENSSLDG00000023179	urb1	99	44.691	ENSCCAG00000021299	URB1	99	44.691	Cebus_capucinus
ENSSLDG00000023179	urb1	99	44.859	ENSCATG00000042630	URB1	99	45.119	Cercocebus_atys
ENSSLDG00000023179	urb1	99	45.419	ENSCLAG00000005262	URB1	99	45.510	Chinchilla_lanigera
ENSSLDG00000023179	urb1	99	44.083	ENSCSAG00000009584	URB1	99	44.343	Chlorocebus_sabaeus
ENSSLDG00000023179	urb1	99	48.021	ENSCPBG00000006454	URB1	99	48.108	Chrysemys_picta_bellii
ENSSLDG00000023179	urb1	99	44.720	ENSCANG00000031088	URB1	99	44.980	Colobus_angolensis_palliatus
ENSSLDG00000023179	urb1	99	44.577	ENSCGRG00001010616	Urb1	99	44.483	Cricetulus_griseus_chok1gshd
ENSSLDG00000023179	urb1	98	44.633	ENSCGRG00000015840	Urb1	99	44.633	Cricetulus_griseus_crigri
ENSSLDG00000023179	urb1	99	71.843	ENSCSEG00000012616	urb1	99	71.843	Cynoglossus_semilaevis
ENSSLDG00000023179	urb1	92	75.894	ENSCVAG00000009076	urb1	99	75.894	Cyprinodon_variegatus
ENSSLDG00000023179	urb1	99	55.057	ENSDARG00000060308	urb1	99	55.101	Danio_rerio
ENSSLDG00000023179	urb1	85	48.105	ENSDNOG00000015586	URB1	99	48.156	Dasypus_novemcinctus
ENSSLDG00000023179	urb1	99	44.576	ENSDORG00000006735	Urb1	99	44.576	Dipodomys_ordii
ENSSLDG00000023179	urb1	92	52.347	ENSETEG00000009080	URB1	92	52.347	Echinops_telfairi
ENSSLDG00000023179	urb1	95	50.166	ENSEASG00005007711	URB1	99	44.554	Equus_asinus_asinus
ENSSLDG00000023179	urb1	95	54.340	ENSECAG00000013206	URB1	99	54.340	Equus_caballus
ENSSLDG00000023179	urb1	99	59.178	ENSELUG00000020516	urb1	99	59.353	Esox_lucius
ENSSLDG00000023179	urb1	99	44.561	ENSFCAG00000002177	URB1	99	44.561	Felis_catus
ENSSLDG00000023179	urb1	98	43.190	ENSFALG00000004636	URB1	99	43.234	Ficedula_albicollis
ENSSLDG00000023179	urb1	99	44.672	ENSFDAG00000007288	URB1	95	44.802	Fukomys_damarensis
ENSSLDG00000023179	urb1	99	67.152	ENSFHEG00000000202	urb1	99	70.973	Fundulus_heteroclitus
ENSSLDG00000023179	urb1	93	60.995	ENSGMOG00000001838	urb1	94	60.995	Gadus_morhua
ENSSLDG00000023179	urb1	99	47.146	ENSGALG00000015887	URB1	99	47.364	Gallus_gallus
ENSSLDG00000023179	urb1	99	68.894	ENSGAFG00000020694	urb1	99	68.894	Gambusia_affinis
ENSSLDG00000023179	urb1	99	79.004	ENSGACG00000011703	urb1	99	79.004	Gasterosteus_aculeatus
ENSSLDG00000023179	urb1	99	47.958	ENSGAGG00000022544	URB1	99	47.958	Gopherus_agassizii
ENSSLDG00000023179	urb1	99	44.831	ENSGGOG00000000285	URB1	99	44.961	Gorilla_gorilla
ENSSLDG00000023179	urb1	99	78.309	ENSHBUG00000001904	urb1	100	78.309	Haplochromis_burtoni
ENSSLDG00000023179	urb1	99	43.325	ENSHGLG00000004907	URB1	99	43.325	Heterocephalus_glaber_female
ENSSLDG00000023179	urb1	99	43.785	ENSHGLG00100010749	URB1	99	43.785	Heterocephalus_glaber_male
ENSSLDG00000023179	urb1	72	75.723	ENSHCOG00000018683	urb1	98	75.723	Hippocampus_comes
ENSSLDG00000023179	urb1	99	49.280	ENSIPUG00000014721	urb1	99	49.302	Ictalurus_punctatus
ENSSLDG00000023179	urb1	99	45.503	ENSSTOG00000004539	URB1	99	45.253	Ictidomys_tridecemlineatus
ENSSLDG00000023179	urb1	92	77.544	ENSKMAG00000006001	urb1	99	74.181	Kryptolebias_marmoratus
ENSSLDG00000023179	urb1	97	72.558	ENSLBEG00000027208	urb1	99	72.558	Labrus_bergylta
ENSSLDG00000023179	urb1	99	45.164	ENSLACG00000017059	URB1	100	45.164	Latimeria_chalumnae
ENSSLDG00000023179	urb1	99	55.177	ENSLOCG00000009190	urb1	99	55.264	Lepisosteus_oculatus
ENSSLDG00000023179	urb1	99	44.921	ENSLAFG00000010407	URB1	99	44.921	Loxodonta_africana
ENSSLDG00000023179	urb1	99	44.512	ENSMFAG00000034391	URB1	97	44.772	Macaca_fascicularis
ENSSLDG00000023179	urb1	99	44.512	ENSMMUG00000010295	URB1	99	44.772	Macaca_mulatta
ENSSLDG00000023179	urb1	99	43.948	ENSMNEG00000032981	URB1	99	44.165	Macaca_nemestrina
ENSSLDG00000023179	urb1	99	44.748	ENSMLEG00000041435	URB1	99	45.009	Mandrillus_leucophaeus
ENSSLDG00000023179	urb1	99	76.279	ENSMAMG00000011238	urb1	99	76.279	Mastacembelus_armatus
ENSSLDG00000023179	urb1	99	70.971	ENSMZEG00005011862	urb1	100	70.971	Maylandia_zebra
ENSSLDG00000023179	urb1	98	46.696	ENSMGAG00000014512	URB1	99	46.874	Meleagris_gallopavo
ENSSLDG00000023179	urb1	93	51.965	ENSMAUG00000010516	Urb1	99	51.965	Mesocricetus_auratus
ENSSLDG00000023179	urb1	100	44.333	ENSMICG00000016424	URB1	99	44.333	Microcebus_murinus
ENSSLDG00000023179	urb1	99	44.028	ENSMOCG00000012613	Urb1	99	44.159	Microtus_ochrogaster
ENSSLDG00000023179	urb1	99	44.657	ENSMODG00000021076	URB1	99	44.657	Monodelphis_domestica
ENSSLDG00000023179	urb1	99	74.867	ENSMALG00000017411	urb1	99	74.867	Monopterus_albus
ENSSLDG00000023179	urb1	99	43.461	MGP_CAROLIEiJ_G0020948	Urb1	99	43.418	Mus_caroli
ENSSLDG00000023179	urb1	99	43.499	ENSMUSG00000039929	Urb1	99	43.499	Mus_musculus
ENSSLDG00000023179	urb1	99	43.617	MGP_PahariEiJ_G0016653	Urb1	99	43.617	Mus_pahari
ENSSLDG00000023179	urb1	99	43.529	MGP_SPRETEiJ_G0021854	Urb1	99	43.467	Mus_spretus
ENSSLDG00000023179	urb1	99	44.541	ENSMPUG00000001123	URB1	99	44.722	Mustela_putorius_furo
ENSSLDG00000023179	urb1	99	43.769	ENSNGAG00000001905	Urb1	99	43.769	Nannospalax_galili
ENSSLDG00000023179	urb1	83	74.444	ENSNBRG00000001049	urb1	99	74.444	Neolamprologus_brichardi
ENSSLDG00000023179	urb1	99	43.274	ENSNLEG00000026872	URB1	99	43.427	Nomascus_leucogenys
ENSSLDG00000023179	urb1	96	41.539	ENSMEUG00000010828	URB1	96	41.921	Notamacropus_eugenii
ENSSLDG00000023179	urb1	99	42.988	ENSOPRG00000013482	URB1	99	43.063	Ochotona_princeps
ENSSLDG00000023179	urb1	99	44.488	ENSODEG00000002587	URB1	99	44.488	Octodon_degus
ENSSLDG00000023179	urb1	99	78.894	ENSONIG00000005599	urb1	100	78.894	Oreochromis_niloticus
ENSSLDG00000023179	urb1	99	45.017	ENSOCUG00000009381	URB1	99	45.061	Oryctolagus_cuniculus
ENSSLDG00000023179	urb1	99	71.106	ENSORLG00000003429	urb1	99	71.106	Oryzias_latipes
ENSSLDG00000023179	urb1	99	70.658	ENSORLG00020013785	urb1	99	70.658	Oryzias_latipes_hni
ENSSLDG00000023179	urb1	93	76.045	ENSORLG00015019421	urb1	99	76.045	Oryzias_latipes_hsok
ENSSLDG00000023179	urb1	81	72.727	ENSOMEG00000002094	urb1	99	72.727	Oryzias_melastigma
ENSSLDG00000023179	urb1	99	44.672	ENSOGAG00000017140	URB1	99	44.682	Otolemur_garnettii
ENSSLDG00000023179	urb1	94	48.379	ENSOARG00000013679	URB1	99	47.904	Ovis_aries
ENSSLDG00000023179	urb1	99	44.657	ENSPPAG00000003423	URB1	99	44.787	Pan_paniscus
ENSSLDG00000023179	urb1	99	44.716	ENSPPRG00000023131	URB1	99	44.716	Panthera_pardus
ENSSLDG00000023179	urb1	87	46.570	ENSPTIG00000016125	URB1	93	46.570	Panthera_tigris_altaica
ENSSLDG00000023179	urb1	99	44.570	ENSPTRG00000013852	URB1	99	44.700	Pan_troglodytes
ENSSLDG00000023179	urb1	99	44.705	ENSPANG00000021964	URB1	99	44.965	Papio_anubis
ENSSLDG00000023179	urb1	99	54.757	ENSPKIG00000003683	urb1	99	54.892	Paramormyrops_kingsleyae
ENSSLDG00000023179	urb1	99	44.079	ENSPEMG00000021205	Urb1	98	44.079	Peromyscus_maniculatus_bairdii
ENSSLDG00000023179	urb1	80	32.613	ENSPMAG00000009733	URB1	99	33.352	Petromyzon_marinus
ENSSLDG00000023179	urb1	99	43.810	ENSPCIG00000016350	URB1	99	43.987	Phascolarctos_cinereus
ENSSLDG00000023179	urb1	97	72.100	ENSPLAG00000004371	urb1	100	72.100	Poecilia_latipinna
ENSSLDG00000023179	urb1	99	72.434	ENSPMEG00000006634	urb1	100	72.434	Poecilia_mexicana
ENSSLDG00000023179	urb1	99	71.839	ENSPREG00000013453	urb1	100	71.839	Poecilia_reticulata
ENSSLDG00000023179	urb1	99	44.522	ENSPPYG00000011359	URB1	99	44.517	Pongo_abelii
ENSSLDG00000023179	urb1	99	40.105	ENSPCAG00000007430	URB1	99	40.017	Procavia_capensis
ENSSLDG00000023179	urb1	100	44.372	ENSPCOG00000022695	URB1	99	44.551	Propithecus_coquereli
ENSSLDG00000023179	urb1	99	44.106	ENSPVAG00000000889	URB1	99	44.106	Pteropus_vampyrus
ENSSLDG00000023179	urb1	99	74.481	ENSPNYG00000010589	urb1	100	74.481	Pundamilia_nyererei
ENSSLDG00000023179	urb1	99	51.362	ENSPNAG00000019324	urb1	99	51.362	Pygocentrus_nattereri
ENSSLDG00000023179	urb1	99	43.505	ENSRNOG00000002080	Urb1	99	43.505	Rattus_norvegicus
ENSSLDG00000023179	urb1	99	44.507	ENSRBIG00000033122	URB1	99	44.768	Rhinopithecus_bieti
ENSSLDG00000023179	urb1	99	44.396	ENSRROG00000040237	URB1	99	44.657	Rhinopithecus_roxellana
ENSSLDG00000023179	urb1	99	44.614	ENSSBOG00000027672	URB1	99	44.788	Saimiri_boliviensis_boliviensis
ENSSLDG00000023179	urb1	99	44.280	ENSSHAG00000005140	URB1	100	44.324	Sarcophilus_harrisii
ENSSLDG00000023179	urb1	93	58.527	ENSSFOG00015000339	urb1	99	58.527	Scleropages_formosus
ENSSLDG00000023179	urb1	99	84.422	ENSSMAG00000003782	urb1	100	84.819	Scophthalmus_maximus
ENSSLDG00000023179	urb1	100	98.407	ENSSDUG00000012313	urb1	100	98.407	Seriola_dumerili
ENSSLDG00000023179	urb1	99	45.964	ENSSPUG00000012447	URB1	99	46.030	Sphenodon_punctatus
ENSSLDG00000023179	urb1	99	80.212	ENSSPAG00000006325	urb1	99	80.212	Stegastes_partitus
ENSSLDG00000023179	urb1	99	44.129	ENSSSCG00000032024	URB1	99	44.129	Sus_scrofa
ENSSLDG00000023179	urb1	74	48.960	ENSTGUG00000013442	URB1	100	48.960	Taeniopygia_guttata
ENSSLDG00000023179	urb1	99	72.840	ENSTRUG00000009372	urb1	99	72.840	Takifugu_rubripes
ENSSLDG00000023179	urb1	99	70.405	ENSTNIG00000016277	urb1	99	70.405	Tetraodon_nigroviridis
ENSSLDG00000023179	urb1	79	50.000	ENSTBEG00000010044	URB1	80	50.000	Tupaia_belangeri
ENSSLDG00000023179	urb1	88	51.148	ENSTTRG00000007712	URB1	91	49.897	Tursiops_truncatus
ENSSLDG00000023179	urb1	99	44.796	ENSUAMG00000012231	URB1	99	44.931	Ursus_americanus
ENSSLDG00000023179	urb1	87	47.171	ENSUMAG00000017419	URB1	93	47.171	Ursus_maritimus
ENSSLDG00000023179	urb1	67	62.400	ENSVPAG00000001164	URB1	67	62.400	Vicugna_pacos
ENSSLDG00000023179	urb1	95	54.374	ENSVVUG00000000551	URB1	99	44.721	Vulpes_vulpes
ENSSLDG00000023179	urb1	99	45.329	ENSXETG00000009895	urb1	99	45.329	Xenopus_tropicalis
ENSSLDG00000023179	urb1	99	78.689	ENSXCOG00000005500	urb1	100	78.689	Xiphophorus_couchianus
ENSSLDG00000023179	urb1	99	79.781	ENSXMAG00000007253	urb1	100	79.781	Xiphophorus_maculatus