EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000023189 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-117n7.8
Alias: -
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 47939 bases
Position: chrPEQF01099425.1:1017410-1065348
Accession: 111645264
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000030108	S1	PF00575.23	6.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000030980	-	3036	XM_023394386	ENSSLDP00000030108	1011 (aa)	XP_023250154	-

Gene Model

Click here to download ENSSLDG00000023189's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000023189's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000023189	si:ch211-117n7.8	84	56.387	ENSG00000068784	SRBD1	85	56.387	Homo_sapiens
ENSSLDG00000023189	si:ch211-117n7.8	100	82.330	ENSAPOG00000005103	si:ch211-117n7.8	94	83.798	Acanthochromis_polyacanthus
ENSSLDG00000023189	si:ch211-117n7.8	85	56.571	ENSAMEG00000005993	SRBD1	87	56.571	Ailuropoda_melanoleuca
ENSSLDG00000023189	si:ch211-117n7.8	99	83.019	ENSACIG00000009875	si:ch211-117n7.8	96	83.368	Amphilophus_citrinellus
ENSSLDG00000023189	si:ch211-117n7.8	100	81.225	ENSAOCG00000024718	si:ch211-117n7.8	95	83.161	Amphiprion_ocellaris
ENSSLDG00000023189	si:ch211-117n7.8	100	80.534	ENSAPEG00000002645	si:ch211-117n7.8	97	82.335	Amphiprion_percula
ENSSLDG00000023189	si:ch211-117n7.8	100	81.540	ENSATEG00000010844	si:ch211-117n7.8	97	81.046	Anabas_testudineus
ENSSLDG00000023189	si:ch211-117n7.8	88	55.850	ENSAPLG00000006313	SRBD1	89	55.850	Anas_platyrhynchos
ENSSLDG00000023189	si:ch211-117n7.8	84	56.387	ENSANAG00000025573	SRBD1	86	56.387	Aotus_nancymaae
ENSSLDG00000023189	si:ch211-117n7.8	100	83.597	ENSACLG00000024219	si:ch211-117n7.8	97	83.597	Astatotilapia_calliptera
ENSSLDG00000023189	si:ch211-117n7.8	99	63.807	ENSAMXG00000004294	SRBD1	93	66.187	Astyanax_mexicanus
ENSSLDG00000023189	si:ch211-117n7.8	83	56.890	ENSBTAG00000007508	SRBD1	81	56.890	Bos_taurus
ENSSLDG00000023189	si:ch211-117n7.8	84	56.502	ENSCJAG00000000727	SRBD1	86	56.502	Callithrix_jacchus
ENSSLDG00000023189	si:ch211-117n7.8	96	52.738	ENSCAFG00000002554	SRBD1	96	52.738	Canis_familiaris
ENSSLDG00000023189	si:ch211-117n7.8	96	50.152	ENSCAFG00020026284	SRBD1	100	57.358	Canis_lupus_dingo
ENSSLDG00000023189	si:ch211-117n7.8	83	57.126	ENSCHIG00000016535	SRBD1	82	57.126	Capra_hircus
ENSSLDG00000023189	si:ch211-117n7.8	96	52.834	ENSTSYG00000012797	SRBD1	96	52.834	Carlito_syrichta
ENSSLDG00000023189	si:ch211-117n7.8	83	57.757	ENSCPOG00000004773	SRBD1	84	57.757	Cavia_porcellus
ENSSLDG00000023189	si:ch211-117n7.8	84	56.732	ENSCCAG00000025589	SRBD1	86	56.732	Cebus_capucinus
ENSSLDG00000023189	si:ch211-117n7.8	84	56.732	ENSCATG00000039530	SRBD1	86	56.732	Cercocebus_atys
ENSSLDG00000023189	si:ch211-117n7.8	98	52.658	ENSCLAG00000008623	SRBD1	84	58.284	Chinchilla_lanigera
ENSSLDG00000023189	si:ch211-117n7.8	84	56.732	ENSCSAG00000013350	SRBD1	86	56.732	Chlorocebus_sabaeus
ENSSLDG00000023189	si:ch211-117n7.8	73	66.000	ENSCHOG00000003805	SRBD1	72	66.000	Choloepus_hoffmanni
ENSSLDG00000023189	si:ch211-117n7.8	83	58.205	ENSCPBG00000005677	SRBD1	84	58.205	Chrysemys_picta_bellii
ENSSLDG00000023189	si:ch211-117n7.8	78	40.648	ENSCING00000005950	-	99	40.648	Ciona_intestinalis
ENSSLDG00000023189	si:ch211-117n7.8	78	41.866	ENSCSAVG00000000861	-	99	41.866	Ciona_savignyi
ENSSLDG00000023189	si:ch211-117n7.8	95	52.444	ENSCANG00000016307	SRBD1	96	52.444	Colobus_angolensis_palliatus
ENSSLDG00000023189	si:ch211-117n7.8	83	56.651	ENSCGRG00001000513	Srbd1	84	56.651	Cricetulus_griseus_chok1gshd
ENSSLDG00000023189	si:ch211-117n7.8	83	56.651	ENSCGRG00000002283	Srbd1	84	56.651	Cricetulus_griseus_crigri
ENSSLDG00000023189	si:ch211-117n7.8	99	73.689	ENSCSEG00000000856	si:ch211-117n7.8	96	74.949	Cynoglossus_semilaevis
ENSSLDG00000023189	si:ch211-117n7.8	86	83.429	ENSCVAG00000020212	si:ch211-117n7.8	92	83.429	Cyprinodon_variegatus
ENSSLDG00000023189	si:ch211-117n7.8	84	55.889	ENSDNOG00000018686	SRBD1	85	55.889	Dasypus_novemcinctus
ENSSLDG00000023189	si:ch211-117n7.8	84	56.776	ENSDORG00000010468	Srbd1	85	56.776	Dipodomys_ordii
ENSSLDG00000023189	si:ch211-117n7.8	78	36.136	FBgn0051156	CG31156	79	36.341	Drosophila_melanogaster
ENSSLDG00000023189	si:ch211-117n7.8	86	56.781	ENSETEG00000000739	SRBD1	89	57.273	Echinops_telfairi
ENSSLDG00000023189	si:ch211-117n7.8	72	48.077	ENSEBUG00000008902	si:ch211-117n7.8	95	48.077	Eptatretus_burgeri
ENSSLDG00000023189	si:ch211-117n7.8	96	50.202	ENSEASG00005003132	SRBD1	98	56.391	Equus_asinus_asinus
ENSSLDG00000023189	si:ch211-117n7.8	84	56.322	ENSECAG00000013865	SRBD1	84	56.322	Equus_caballus
ENSSLDG00000023189	si:ch211-117n7.8	99	65.477	ENSELUG00000012592	si:ch211-117n7.8	92	67.857	Esox_lucius
ENSSLDG00000023189	si:ch211-117n7.8	84	56.502	ENSFCAG00000005101	SRBD1	85	56.502	Felis_catus
ENSSLDG00000023189	si:ch211-117n7.8	84	57.026	ENSFALG00000012966	SRBD1	86	57.026	Ficedula_albicollis
ENSSLDG00000023189	si:ch211-117n7.8	86	56.567	ENSFDAG00000016670	SRBD1	87	56.567	Fukomys_damarensis
ENSSLDG00000023189	si:ch211-117n7.8	99	79.307	ENSFHEG00000019480	si:ch211-117n7.8	93	80.041	Fundulus_heteroclitus
ENSSLDG00000023189	si:ch211-117n7.8	50	70.998	ENSGMOG00000018010	-	100	70.998	Gadus_morhua
ENSSLDG00000023189	si:ch211-117n7.8	83	58.373	ENSGALG00000009990	SRBD1	84	58.747	Gallus_gallus
ENSSLDG00000023189	si:ch211-117n7.8	99	78.020	ENSGAFG00000019664	si:ch211-117n7.8	94	79.772	Gambusia_affinis
ENSSLDG00000023189	si:ch211-117n7.8	62	83.876	ENSGACG00000010794	si:ch211-117n7.8	100	83.876	Gasterosteus_aculeatus
ENSSLDG00000023189	si:ch211-117n7.8	83	58.323	ENSGAGG00000006166	SRBD1	99	58.323	Gopherus_agassizii
ENSSLDG00000023189	si:ch211-117n7.8	84	56.617	ENSGGOG00000005910	SRBD1	88	56.617	Gorilla_gorilla
ENSSLDG00000023189	si:ch211-117n7.8	99	69.802	ENSHBUG00000013207	si:ch211-117n7.8	100	69.604	Haplochromis_burtoni
ENSSLDG00000023189	si:ch211-117n7.8	83	57.957	ENSHGLG00000018153	-	84	57.957	Heterocephalus_glaber_female
ENSSLDG00000023189	si:ch211-117n7.8	83	58.076	ENSHGLG00100015183	-	84	58.076	Heterocephalus_glaber_male
ENSSLDG00000023189	si:ch211-117n7.8	97	64.381	ENSIPUG00000009661	srbd1	93	65.456	Ictalurus_punctatus
ENSSLDG00000023189	si:ch211-117n7.8	83	58.452	ENSSTOG00000005898	SRBD1	84	58.452	Ictidomys_tridecemlineatus
ENSSLDG00000023189	si:ch211-117n7.8	97	48.837	ENSJJAG00000022244	Srbd1	83	54.147	Jaculus_jaculus
ENSSLDG00000023189	si:ch211-117n7.8	100	81.405	ENSKMAG00000003473	si:ch211-117n7.8	93	82.139	Kryptolebias_marmoratus
ENSSLDG00000023189	si:ch211-117n7.8	100	82.016	ENSLBEG00000027518	si:ch211-117n7.8	97	82.016	Labrus_bergylta
ENSSLDG00000023189	si:ch211-117n7.8	83	58.451	ENSLACG00000009790	SRBD1	99	58.451	Latimeria_chalumnae
ENSSLDG00000023189	si:ch211-117n7.8	96	61.616	ENSLOCG00000016360	si:ch211-117n7.8	95	61.640	Lepisosteus_oculatus
ENSSLDG00000023189	si:ch211-117n7.8	84	56.732	ENSMFAG00000042026	SRBD1	86	56.732	Macaca_fascicularis
ENSSLDG00000023189	si:ch211-117n7.8	84	56.732	ENSMMUG00000003490	SRBD1	86	56.732	Macaca_mulatta
ENSSLDG00000023189	si:ch211-117n7.8	84	55.351	ENSMNEG00000034701	SRBD1	85	55.390	Macaca_nemestrina
ENSSLDG00000023189	si:ch211-117n7.8	95	52.599	ENSMLEG00000000745	SRBD1	96	52.599	Mandrillus_leucophaeus
ENSSLDG00000023189	si:ch211-117n7.8	99	82.458	ENSMAMG00000021921	si:ch211-117n7.8	97	82.755	Mastacembelus_armatus
ENSSLDG00000023189	si:ch211-117n7.8	100	83.794	ENSMZEG00005027369	si:ch211-117n7.8	97	83.794	Maylandia_zebra
ENSSLDG00000023189	si:ch211-117n7.8	79	55.843	ENSMGAG00000010273	SRBD1	99	55.843	Meleagris_gallopavo
ENSSLDG00000023189	si:ch211-117n7.8	77	55.610	ENSMAUG00000013916	Srbd1	95	55.610	Mesocricetus_auratus
ENSSLDG00000023189	si:ch211-117n7.8	96	52.893	ENSMICG00000007835	SRBD1	95	52.899	Microcebus_murinus
ENSSLDG00000023189	si:ch211-117n7.8	83	56.243	ENSMOCG00000018716	Srbd1	84	56.243	Microtus_ochrogaster
ENSSLDG00000023189	si:ch211-117n7.8	99	77.734	ENSMMOG00000007507	si:ch211-117n7.8	96	78.800	Mola_mola
ENSSLDG00000023189	si:ch211-117n7.8	100	82.922	ENSMALG00000001562	si:ch211-117n7.8	97	82.626	Monopterus_albus
ENSSLDG00000023189	si:ch211-117n7.8	83	56.169	MGP_CAROLIEiJ_G0021934	Srbd1	99	56.352	Mus_caroli
ENSSLDG00000023189	si:ch211-117n7.8	83	56.169	ENSMUSG00000024135	Srbd1	99	53.571	Mus_musculus
ENSSLDG00000023189	si:ch211-117n7.8	85	55.825	MGP_PahariEiJ_G0020924	Srbd1	86	55.825	Mus_pahari
ENSSLDG00000023189	si:ch211-117n7.8	83	55.934	MGP_SPRETEiJ_G0022850	Srbd1	84	55.934	Mus_spretus
ENSSLDG00000023189	si:ch211-117n7.8	96	53.144	ENSMLUG00000007039	SRBD1	96	53.144	Myotis_lucifugus
ENSSLDG00000023189	si:ch211-117n7.8	83	55.454	ENSNGAG00000011893	Srbd1	84	55.454	Nannospalax_galili
ENSSLDG00000023189	si:ch211-117n7.8	100	78.585	ENSNBRG00000012873	si:ch211-117n7.8	99	79.191	Neolamprologus_brichardi
ENSSLDG00000023189	si:ch211-117n7.8	84	56.387	ENSNLEG00000016877	SRBD1	85	56.387	Nomascus_leucogenys
ENSSLDG00000023189	si:ch211-117n7.8	83	57.092	ENSODEG00000012095	SRBD1	85	57.092	Octodon_degus
ENSSLDG00000023189	si:ch211-117n7.8	100	83.992	ENSONIG00000000945	si:ch211-117n7.8	100	87.294	Oreochromis_niloticus
ENSSLDG00000023189	si:ch211-117n7.8	95	52.589	ENSOCUG00000015385	SRBD1	96	52.696	Oryctolagus_cuniculus
ENSSLDG00000023189	si:ch211-117n7.8	100	72.655	ENSORLG00000004427	si:ch211-117n7.8	93	73.787	Oryzias_latipes
ENSSLDG00000023189	si:ch211-117n7.8	100	75.345	ENSORLG00020012792	si:ch211-117n7.8	93	76.598	Oryzias_latipes_hni
ENSSLDG00000023189	si:ch211-117n7.8	100	75.123	ENSORLG00015018598	si:ch211-117n7.8	93	76.471	Oryzias_latipes_hsok
ENSSLDG00000023189	si:ch211-117n7.8	100	73.570	ENSOMEG00000012229	si:ch211-117n7.8	92	76.515	Oryzias_melastigma
ENSSLDG00000023189	si:ch211-117n7.8	83	54.706	ENSOGAG00000001076	SRBD1	86	53.908	Otolemur_garnettii
ENSSLDG00000023189	si:ch211-117n7.8	83	53.273	ENSOARG00000005958	SRBD1	84	53.273	Ovis_aries
ENSSLDG00000023189	si:ch211-117n7.8	83	56.958	ENSPPAG00000038442	SRBD1	85	56.387	Pan_paniscus
ENSSLDG00000023189	si:ch211-117n7.8	85	56.357	ENSPPRG00000003449	SRBD1	86	56.372	Panthera_pardus
ENSSLDG00000023189	si:ch211-117n7.8	85	56.372	ENSPTIG00000012495	SRBD1	86	56.372	Panthera_tigris_altaica
ENSSLDG00000023189	si:ch211-117n7.8	83	57.193	ENSPTRG00000011889	SRBD1	85	56.617	Pan_troglodytes
ENSSLDG00000023189	si:ch211-117n7.8	95	52.294	ENSPANG00000008063	SRBD1	96	52.294	Papio_anubis
ENSSLDG00000023189	si:ch211-117n7.8	96	62.002	ENSPKIG00000021973	si:ch211-117n7.8	96	62.002	Paramormyrops_kingsleyae
ENSSLDG00000023189	si:ch211-117n7.8	83	57.615	ENSPSIG00000008992	SRBD1	84	57.615	Pelodiscus_sinensis
ENSSLDG00000023189	si:ch211-117n7.8	92	76.338	ENSPMGG00000013348	si:ch211-117n7.8	97	75.077	Periophthalmus_magnuspinnatus
ENSSLDG00000023189	si:ch211-117n7.8	83	55.041	ENSPEMG00000020684	Srbd1	84	55.041	Peromyscus_maniculatus_bairdii
ENSSLDG00000023189	si:ch211-117n7.8	99	78.890	ENSPFOG00000010650	si:ch211-117n7.8	93	80.270	Poecilia_formosa
ENSSLDG00000023189	si:ch211-117n7.8	99	78.989	ENSPLAG00000002141	si:ch211-117n7.8	93	80.374	Poecilia_latipinna
ENSSLDG00000023189	si:ch211-117n7.8	99	79.088	ENSPMEG00000018537	si:ch211-117n7.8	93	80.478	Poecilia_mexicana
ENSSLDG00000023189	si:ch211-117n7.8	99	77.151	ENSPREG00000003258	si:ch211-117n7.8	94	78.571	Poecilia_reticulata
ENSSLDG00000023189	si:ch211-117n7.8	96	49.089	ENSPPYG00000012444	SRBD1	95	48.706	Pongo_abelii
ENSSLDG00000023189	si:ch211-117n7.8	75	51.643	ENSPCAG00000005629	SRBD1	80	51.643	Procavia_capensis
ENSSLDG00000023189	si:ch211-117n7.8	86	59.393	ENSPCOG00000017669	SRBD1	90	59.393	Propithecus_coquereli
ENSSLDG00000023189	si:ch211-117n7.8	83	50.177	ENSPVAG00000001782	SRBD1	84	50.177	Pteropus_vampyrus
ENSSLDG00000023189	si:ch211-117n7.8	99	77.083	ENSPNYG00000000508	si:ch211-117n7.8	100	77.083	Pundamilia_nyererei
ENSSLDG00000023189	si:ch211-117n7.8	97	65.749	ENSPNAG00000013492	SRBD1	94	65.699	Pygocentrus_nattereri
ENSSLDG00000023189	si:ch211-117n7.8	84	54.994	ENSRNOG00000014720	Srbd1	85	54.971	Rattus_norvegicus
ENSSLDG00000023189	si:ch211-117n7.8	95	52.192	ENSRBIG00000033486	SRBD1	96	52.192	Rhinopithecus_bieti
ENSSLDG00000023189	si:ch211-117n7.8	95	52.192	ENSRROG00000041599	SRBD1	96	52.192	Rhinopithecus_roxellana
ENSSLDG00000023189	si:ch211-117n7.8	84	56.336	ENSSBOG00000024982	SRBD1	86	56.336	Saimiri_boliviensis_boliviensis
ENSSLDG00000023189	si:ch211-117n7.8	86	65.862	ENSSFOG00015001128	si:ch211-117n7.8	94	65.862	Scleropages_formosus
ENSSLDG00000023189	si:ch211-117n7.8	100	84.669	ENSSMAG00000018256	si:ch211-117n7.8	98	84.669	Scophthalmus_maximus
ENSSLDG00000023189	si:ch211-117n7.8	83	53.018	ENSSARG00000009740	SRBD1	85	53.018	Sorex_araneus
ENSSLDG00000023189	si:ch211-117n7.8	84	59.107	ENSSPUG00000010475	SRBD1	94	59.107	Sphenodon_punctatus
ENSSLDG00000023189	si:ch211-117n7.8	99	75.629	ENSSPAG00000008092	-	93	79.876	Stegastes_partitus
ENSSLDG00000023189	si:ch211-117n7.8	96	52.637	ENSSSCG00000008445	SRBD1	94	52.637	Sus_scrofa
ENSSLDG00000023189	si:ch211-117n7.8	83	57.412	ENSTGUG00000003878	SRBD1	100	57.412	Taeniopygia_guttata
ENSSLDG00000023189	si:ch211-117n7.8	99	74.580	ENSTRUG00000007080	si:ch211-117n7.8	100	78.228	Takifugu_rubripes
ENSSLDG00000023189	si:ch211-117n7.8	99	73.587	ENSTNIG00000007464	si:ch211-117n7.8	93	74.745	Tetraodon_nigroviridis
ENSSLDG00000023189	si:ch211-117n7.8	54	79.787	ENSTBEG00000004556	SRBD1	54	79.787	Tupaia_belangeri
ENSSLDG00000023189	si:ch211-117n7.8	75	58.566	ENSTTRG00000011871	SRBD1	75	58.566	Tursiops_truncatus
ENSSLDG00000023189	si:ch211-117n7.8	85	56.686	ENSUAMG00000008126	SRBD1	97	54.676	Ursus_americanus
ENSSLDG00000023189	si:ch211-117n7.8	85	56.686	ENSUMAG00000012902	SRBD1	85	56.686	Ursus_maritimus
ENSSLDG00000023189	si:ch211-117n7.8	84	55.787	ENSVPAG00000006825	SRBD1	93	55.787	Vicugna_pacos
ENSSLDG00000023189	si:ch211-117n7.8	96	52.792	ENSVVUG00000005389	SRBD1	96	52.792	Vulpes_vulpes
ENSSLDG00000023189	si:ch211-117n7.8	99	45.204	ENSXETG00000002760	srbd1	95	45.837	Xenopus_tropicalis
ENSSLDG00000023189	si:ch211-117n7.8	99	78.020	ENSXMAG00000016861	si:ch211-117n7.8	93	79.543	Xiphophorus_maculatus