EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000023254 (Gene tree)
Gene ID: -
Gene Symbol: ern1
Alias: sb:eu1005|zgc:109932
Full Name: endoplasmic reticulum to nucleus signaling 1
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 20477 bases
Position: chrPEQF01099169.1:1121832-1142308
Accession: 111667565
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000030177	Ribonuc_2-5A	PF06479.12	3.1e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000031051	-	4709	XM_023423303	ENSSLDP00000030177	1096 (aa)	XP_023279071	UPI000C6FA6D9

Gene Model

Click here to download ENSSLDG00000023254's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000023254's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000023254	ern1	85	56.367	ENSSLDG00000022830	ern2	98	56.366

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000023254	ern1	97	91.226	ENSAPOG00000009999	ern1	97	91.226	Acanthochromis_polyacanthus
ENSSLDG00000023254	ern1	100	89.690	ENSACIG00000021716	ern1	100	89.690	Amphilophus_citrinellus
ENSSLDG00000023254	ern1	99	90.311	ENSAOCG00000012309	ern1	100	90.311	Amphiprion_ocellaris
ENSSLDG00000023254	ern1	99	89.945	ENSAPEG00000011263	ern1	98	95.568	Amphiprion_percula
ENSSLDG00000023254	ern1	100	90.073	ENSATEG00000024468	ern1	100	90.073	Anabas_testudineus
ENSSLDG00000023254	ern1	100	90.420	ENSACLG00000027919	ern1	100	90.420	Astatotilapia_calliptera
ENSSLDG00000023254	ern1	96	79.944	ENSAMXG00000000944	ern1	99	79.944	Astyanax_mexicanus
ENSSLDG00000023254	ern1	94	89.602	ENSCSEG00000014500	ern1	100	89.990	Cynoglossus_semilaevis
ENSSLDG00000023254	ern1	99	85.073	ENSCVAG00000002988	ern1	98	87.812	Cyprinodon_variegatus
ENSSLDG00000023254	ern1	89	83.197	ENSDARG00000013997	ern1	100	83.471	Danio_rerio
ENSSLDG00000023254	ern1	88	83.180	ENSELUG00000005957	ern1	93	83.384	Esox_lucius
ENSSLDG00000023254	ern1	98	86.127	ENSFHEG00000005578	ern1	99	86.127	Fundulus_heteroclitus
ENSSLDG00000023254	ern1	86	87.766	ENSGMOG00000011232	ern1	100	87.766	Gadus_morhua
ENSSLDG00000023254	ern1	99	86.322	ENSGAFG00000020231	ern1	99	86.322	Gambusia_affinis
ENSSLDG00000023254	ern1	86	92.903	ENSGACG00000011700	ern1	98	92.903	Gasterosteus_aculeatus
ENSSLDG00000023254	ern1	99	89.309	ENSHBUG00000012581	ern1	99	89.788	Haplochromis_burtoni
ENSSLDG00000023254	ern1	99	83.563	ENSHCOG00000016199	ern1	99	83.675	Hippocampus_comes
ENSSLDG00000023254	ern1	91	82.306	ENSIPUG00000011083	ern1	96	82.306	Ictalurus_punctatus
ENSSLDG00000023254	ern1	99	86.002	ENSKMAG00000019499	ern1	99	86.002	Kryptolebias_marmoratus
ENSSLDG00000023254	ern1	98	86.747	ENSLBEG00000025907	ern1	100	86.747	Labrus_bergylta
ENSSLDG00000023254	ern1	100	90.893	ENSMAMG00000023439	ern1	100	90.893	Mastacembelus_armatus
ENSSLDG00000023254	ern1	100	90.420	ENSMZEG00005003221	ern1	100	90.420	Maylandia_zebra
ENSSLDG00000023254	ern1	89	92.402	ENSMMOG00000007650	ern1	97	92.402	Mola_mola
ENSSLDG00000023254	ern1	99	88.777	ENSMALG00000017775	ern1	98	88.777	Monopterus_albus
ENSSLDG00000023254	ern1	99	89.124	ENSNBRG00000002179	ern1	99	89.124	Neolamprologus_brichardi
ENSSLDG00000023254	ern1	86	93.856	ENSONIG00000017169	ern1	98	93.856	Oreochromis_niloticus
ENSSLDG00000023254	ern1	98	86.216	ENSORLG00000008940	ern1	100	86.216	Oryzias_latipes
ENSSLDG00000023254	ern1	98	86.309	ENSORLG00020018387	ern1	100	86.309	Oryzias_latipes_hni
ENSSLDG00000023254	ern1	98	86.216	ENSORLG00015007946	ern1	100	86.216	Oryzias_latipes_hsok
ENSSLDG00000023254	ern1	98	86.840	ENSOMEG00000011741	ern1	100	86.840	Oryzias_melastigma
ENSSLDG00000023254	ern1	88	82.752	ENSPKIG00000005593	ern1	98	82.752	Paramormyrops_kingsleyae
ENSSLDG00000023254	ern1	97	86.145	ENSPMGG00000020442	ern1	99	87.365	Periophthalmus_magnuspinnatus
ENSSLDG00000023254	ern1	98	87.371	ENSPFOG00000007378	ern1	99	87.371	Poecilia_formosa
ENSSLDG00000023254	ern1	98	87.163	ENSPLAG00000014780	ern1	99	87.163	Poecilia_latipinna
ENSSLDG00000023254	ern1	98	87.442	ENSPMEG00000016324	ern1	99	87.442	Poecilia_mexicana
ENSSLDG00000023254	ern1	98	86.791	ENSPREG00000006286	ern1	99	86.791	Poecilia_reticulata
ENSSLDG00000023254	ern1	100	90.511	ENSPNYG00000017929	ern1	99	93.294	Pundamilia_nyererei
ENSSLDG00000023254	ern1	93	81.431	ENSPNAG00000029447	ern1	99	81.721	Pygocentrus_nattereri
ENSSLDG00000023254	ern1	100	89.800	ENSSMAG00000015042	ern1	100	89.800	Scophthalmus_maximus
ENSSLDG00000023254	ern1	100	99.088	ENSSDUG00000009098	ern1	100	99.088	Seriola_dumerili
ENSSLDG00000023254	ern1	99	90.137	ENSSPAG00000017539	ern1	99	90.178	Stegastes_partitus
ENSSLDG00000023254	ern1	93	87.415	ENSTRUG00000001041	ern1	98	87.415	Takifugu_rubripes
ENSSLDG00000023254	ern1	85	92.712	ENSTNIG00000017990	ern1	99	91.710	Tetraodon_nigroviridis
ENSSLDG00000023254	ern1	90	91.853	ENSXCOG00000010330	ern1	97	91.853	Xiphophorus_couchianus
ENSSLDG00000023254	ern1	98	86.791	ENSXMAG00000001310	ern1	99	86.791	Xiphophorus_maculatus