EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000023255 (Gene tree)
Gene ID: -
Gene Symbol: srsf5b
Alias: sfrs5b|wu:fe15e05|zgc:113907|zgc:92278
Full Name: serine/arginine-rich splicing factor 5-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 10823 bases
Position: chrPEQF01099023.1:3418263-3429085
Accession: 111661449
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000030155	RRM_1	PF00076.22	1.2e-31	1	2
ENSSLDP00000030155	RRM_1	PF00076.22	1.2e-31	2	2
ENSSLDP00000030159	RRM_1	PF00076.22	9.7e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000031032	-	626	-	ENSSLDP00000030159	152 (aa)	-	-
ENSSLDT00000031028	-	5743	XM_023415019	ENSSLDP00000030155	293 (aa)	XP_023270787	UPI000BBE3D68

Gene Model

Click here to download ENSSLDG00000023255's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000023255's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000023255	srsf5b	70	36.697	ENSSLDG00000024723	-	51	36.697
ENSSLDG00000023255	srsf5b	69	37.681	ENSSLDG00000016868	-	94	36.502
ENSSLDG00000023255	srsf5b	82	53.175	ENSSLDG00000009745	srsf4	59	56.354
ENSSLDG00000023255	srsf5b	84	67.969	ENSSLDG00000004146	srsf5a	63	69.519
ENSSLDG00000023255	srsf5b	82	46.923	ENSSLDG00000010543	-	64	43.646
ENSSLDG00000023255	srsf5b	53	65.000	ENSSLDG00000014858	-	74	67.647
ENSSLDG00000023255	srsf5b	82	61.290	ENSSLDG00000022841	srsf6a	52	63.889
ENSSLDG00000023255	srsf5b	61	43.478	ENSSLDG00000016895	-	67	45.402
ENSSLDG00000023255	srsf5b	55	35.870	ENSSLDG00000011320	cirbpa	55	35.088
ENSSLDG00000023255	srsf5b	60	41.111	ENSSLDG00000012305	srsf9	68	42.541
ENSSLDG00000023255	srsf5b	50	44.578	ENSSLDG00000022631	srsf3b	85	38.739

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000023255	srsf5b	88	73.684	ENSG00000100650	SRSF5	98	74.219	Homo_sapiens
ENSSLDG00000023255	srsf5b	100	97.270	ENSAPOG00000008642	srsf5b	100	97.270	Acanthochromis_polyacanthus
ENSSLDG00000023255	srsf5b	84	75.000	ENSAMEG00000014574	SRSF5	92	72.830	Ailuropoda_melanoleuca
ENSSLDG00000023255	srsf5b	100	95.238	ENSACIG00000010742	srsf5b	100	93.537	Amphilophus_citrinellus
ENSSLDG00000023255	srsf5b	100	97.270	ENSAOCG00000005719	srsf5b	100	97.270	Amphiprion_ocellaris
ENSSLDG00000023255	srsf5b	100	97.270	ENSAPEG00000007830	srsf5b	100	97.270	Amphiprion_percula
ENSSLDG00000023255	srsf5b	100	96.587	ENSATEG00000019112	srsf5b	100	96.587	Anabas_testudineus
ENSSLDG00000023255	srsf5b	80	76.230	ENSAPLG00000014681	SRSF5	94	71.863	Anas_platyrhynchos
ENSSLDG00000023255	srsf5b	84	77.344	ENSACAG00000005143	SRSF5	94	74.905	Anolis_carolinensis
ENSSLDG00000023255	srsf5b	88	73.684	ENSANAG00000027977	-	92	73.846	Aotus_nancymaae
ENSSLDG00000023255	srsf5b	83	73.016	ENSANAG00000037529	-	95	71.875	Aotus_nancymaae
ENSSLDG00000023255	srsf5b	100	95.904	ENSACLG00000026424	srsf5b	100	95.904	Astatotilapia_calliptera
ENSSLDG00000023255	srsf5b	100	90.132	ENSAMXG00000011932	srsf5b	100	86.842	Astyanax_mexicanus
ENSSLDG00000023255	srsf5b	84	75.000	ENSBTAG00000011596	SRSF5	92	72.830	Bos_taurus
ENSSLDG00000023255	srsf5b	88	73.684	ENSCJAG00000014884	SRSF5	92	73.684	Callithrix_jacchus
ENSSLDG00000023255	srsf5b	84	75.000	ENSCAFG00000016589	SRSF5	92	72.830	Canis_familiaris
ENSSLDG00000023255	srsf5b	84	75.000	ENSCAFG00020005661	SRSF5	92	72.830	Canis_lupus_dingo
ENSSLDG00000023255	srsf5b	84	74.219	ENSCHIG00000016794	SRSF5	92	72.830	Capra_hircus
ENSSLDG00000023255	srsf5b	88	73.684	ENSTSYG00000007786	SRSF5	98	71.212	Carlito_syrichta
ENSSLDG00000023255	srsf5b	84	74.219	ENSCAPG00000008801	SRSF5	92	67.557	Cavia_aperea
ENSSLDG00000023255	srsf5b	84	74.219	ENSCPOG00000039926	SRSF5	92	73.208	Cavia_porcellus
ENSSLDG00000023255	srsf5b	88	73.684	ENSCCAG00000029002	SRSF5	92	73.846	Cebus_capucinus
ENSSLDG00000023255	srsf5b	88	73.684	ENSCATG00000045051	SRSF5	92	73.846	Cercocebus_atys
ENSSLDG00000023255	srsf5b	84	75.000	ENSCLAG00000004755	SRSF5	92	73.384	Chinchilla_lanigera
ENSSLDG00000023255	srsf5b	84	75.000	ENSCSAG00000013041	SRSF5	90	73.846	Chlorocebus_sabaeus
ENSSLDG00000023255	srsf5b	84	74.219	ENSCPBG00000021653	SRSF5	94	74.144	Chrysemys_picta_bellii
ENSSLDG00000023255	srsf5b	88	73.684	ENSCANG00000030560	SRSF5	92	73.846	Colobus_angolensis_palliatus
ENSSLDG00000023255	srsf5b	84	75.000	ENSCGRG00001015339	Srsf5	93	68.321	Cricetulus_griseus_chok1gshd
ENSSLDG00000023255	srsf5b	84	75.000	ENSCGRG00000009833	Srsf5	93	68.321	Cricetulus_griseus_crigri
ENSSLDG00000023255	srsf5b	84	97.692	ENSCSEG00000003801	srsf5b	90	93.156	Cynoglossus_semilaevis
ENSSLDG00000023255	srsf5b	84	98.438	ENSCVAG00000017240	srsf5b	88	86.760	Cyprinodon_variegatus
ENSSLDG00000023255	srsf5b	97	91.156	ENSDARG00000027734	srsf5b	90	93.750	Danio_rerio
ENSSLDG00000023255	srsf5b	84	74.219	ENSDNOG00000006160	SRSF5	93	72.830	Dasypus_novemcinctus
ENSSLDG00000023255	srsf5b	84	75.000	ENSDORG00000003989	Srsf5	93	66.412	Dipodomys_ordii
ENSSLDG00000023255	srsf5b	84	71.875	ENSETEG00000020396	SRSF5	99	65.636	Echinops_telfairi
ENSSLDG00000023255	srsf5b	84	57.353	ENSEBUG00000006229	srsf5b	69	63.351	Eptatretus_burgeri
ENSSLDG00000023255	srsf5b	84	75.000	ENSEASG00005016615	SRSF5	92	72.830	Equus_asinus_asinus
ENSSLDG00000023255	srsf5b	88	73.684	ENSECAG00000026873	SRSF5	92	73.684	Equus_caballus
ENSSLDG00000023255	srsf5b	100	81.657	ENSELUG00000019852	srsf5b	100	79.290	Esox_lucius
ENSSLDG00000023255	srsf5b	88	73.684	ENSFCAG00000008848	SRSF5	92	73.684	Felis_catus
ENSSLDG00000023255	srsf5b	84	75.781	ENSFALG00000004979	SRSF5	93	72.519	Ficedula_albicollis
ENSSLDG00000023255	srsf5b	84	75.000	ENSFDAG00000011562	SRSF5	93	73.962	Fukomys_damarensis
ENSSLDG00000023255	srsf5b	92	92.308	ENSFHEG00000009476	srsf5b	88	92.251	Fundulus_heteroclitus
ENSSLDG00000023255	srsf5b	84	90.441	ENSGMOG00000000595	srsf5b	99	80.531	Gadus_morhua
ENSSLDG00000023255	srsf5b	88	74.436	ENSGALG00000009421	SRSF5	92	74.436	Gallus_gallus
ENSSLDG00000023255	srsf5b	92	93.309	ENSGAFG00000002865	srsf5b	89	93.309	Gambusia_affinis
ENSSLDG00000023255	srsf5b	100	84.375	ENSGACG00000007834	srsf5b	100	85.000	Gasterosteus_aculeatus
ENSSLDG00000023255	srsf5b	84	74.219	ENSGAGG00000004447	SRSF5	94	74.144	Gopherus_agassizii
ENSSLDG00000023255	srsf5b	88	73.684	ENSGGOG00000016462	SRSF5	92	73.846	Gorilla_gorilla
ENSSLDG00000023255	srsf5b	100	95.563	ENSHBUG00000012462	srsf5b	100	95.563	Haplochromis_burtoni
ENSSLDG00000023255	srsf5b	84	74.219	ENSHGLG00000010147	SRSF5	93	72.453	Heterocephalus_glaber_female
ENSSLDG00000023255	srsf5b	72	51.948	ENSHGLG00100000095	-	62	60.000	Heterocephalus_glaber_male
ENSSLDG00000023255	srsf5b	84	74.219	ENSHGLG00100015328	SRSF5	93	72.453	Heterocephalus_glaber_male
ENSSLDG00000023255	srsf5b	84	84.848	ENSHCOG00000005592	srsf5b	66	86.458	Hippocampus_comes
ENSSLDG00000023255	srsf5b	84	75.000	ENSSTOG00000020672	SRSF5	93	72.830	Ictidomys_tridecemlineatus
ENSSLDG00000023255	srsf5b	84	75.000	ENSJJAG00000001688	Srsf5	92	66.792	Jaculus_jaculus
ENSSLDG00000023255	srsf5b	100	97.368	ENSKMAG00000020486	srsf5b	100	97.368	Kryptolebias_marmoratus
ENSSLDG00000023255	srsf5b	100	96.271	ENSLBEG00000013647	srsf5b	100	96.271	Labrus_bergylta
ENSSLDG00000023255	srsf5b	84	78.125	ENSLACG00000005874	SRSF5	91	76.154	Latimeria_chalumnae
ENSSLDG00000023255	srsf5b	84	81.203	ENSLOCG00000012438	srsf5b	70	83.420	Lepisosteus_oculatus
ENSSLDG00000023255	srsf5b	84	73.438	ENSLAFG00000005260	SRSF5	92	73.585	Loxodonta_africana
ENSSLDG00000023255	srsf5b	88	73.684	ENSMFAG00000002393	SRSF5	92	73.846	Macaca_fascicularis
ENSSLDG00000023255	srsf5b	88	73.684	ENSMNEG00000030872	SRSF5	92	73.846	Macaca_nemestrina
ENSSLDG00000023255	srsf5b	88	73.684	ENSMLEG00000030017	SRSF5	92	73.846	Mandrillus_leucophaeus
ENSSLDG00000023255	srsf5b	100	95.904	ENSMAMG00000002673	srsf5b	100	95.904	Mastacembelus_armatus
ENSSLDG00000023255	srsf5b	100	95.904	ENSMZEG00005003550	srsf5b	100	95.904	Maylandia_zebra
ENSSLDG00000023255	srsf5b	59	65.169	ENSMGAG00000011835	SRSF5	92	60.090	Meleagris_gallopavo
ENSSLDG00000023255	srsf5b	84	75.000	ENSMAUG00000009544	Srsf5	93	68.321	Mesocricetus_auratus
ENSSLDG00000023255	srsf5b	88	73.684	ENSMICG00000037432	-	92	73.684	Microcebus_murinus
ENSSLDG00000023255	srsf5b	84	75.000	ENSMOCG00000013134	Srsf5	93	68.702	Microtus_ochrogaster
ENSSLDG00000023255	srsf5b	95	88.194	ENSMMOG00000000137	srsf5b	97	80.741	Mola_mola
ENSSLDG00000023255	srsf5b	84	74.219	ENSMODG00000011362	SRSF5	94	73.764	Monodelphis_domestica
ENSSLDG00000023255	srsf5b	100	99.346	ENSMALG00000021875	srsf5b	100	99.346	Monopterus_albus
ENSSLDG00000023255	srsf5b	84	75.000	ENSMUSG00000021134	Srsf5	96	90.909	Mus_musculus
ENSSLDG00000023255	srsf5b	84	75.000	MGP_PahariEiJ_G0029659	Srsf5	93	68.321	Mus_pahari
ENSSLDG00000023255	srsf5b	84	75.000	ENSMPUG00000007458	SRSF5	92	72.830	Mustela_putorius_furo
ENSSLDG00000023255	srsf5b	84	74.219	ENSMLUG00000011939	SRSF5	92	67.300	Myotis_lucifugus
ENSSLDG00000023255	srsf5b	84	75.000	ENSNGAG00000010073	-	93	66.792	Nannospalax_galili
ENSSLDG00000023255	srsf5b	100	91.186	ENSNBRG00000001285	srsf5b	100	92.881	Neolamprologus_brichardi
ENSSLDG00000023255	srsf5b	88	73.684	ENSNLEG00000001615	SRSF5	92	73.846	Nomascus_leucogenys
ENSSLDG00000023255	srsf5b	84	74.219	ENSOPRG00000008286	SRSF5	92	73.864	Ochotona_princeps
ENSSLDG00000023255	srsf5b	84	74.219	ENSODEG00000013469	-	93	73.384	Octodon_degus
ENSSLDG00000023255	srsf5b	84	73.438	ENSODEG00000000700	-	69	81.481	Octodon_degus
ENSSLDG00000023255	srsf5b	100	95.904	ENSONIG00000005759	srsf5b	100	95.904	Oreochromis_niloticus
ENSSLDG00000023255	srsf5b	84	67.969	ENSOANG00000013336	SRSF5	94	69.811	Ornithorhynchus_anatinus
ENSSLDG00000023255	srsf5b	84	74.219	ENSOCUG00000009274	SRSF5	91	73.208	Oryctolagus_cuniculus
ENSSLDG00000023255	srsf5b	100	80.062	ENSORLG00000029854	srsf5b	100	79.751	Oryzias_latipes
ENSSLDG00000023255	srsf5b	92	90.037	ENSORLG00015001720	srsf5b	92	89.299	Oryzias_latipes_hsok
ENSSLDG00000023255	srsf5b	93	90.146	ENSOMEG00000020690	srsf5b	67	89.299	Oryzias_melastigma
ENSSLDG00000023255	srsf5b	84	74.219	ENSOGAG00000015122	SRSF5	93	72.830	Otolemur_garnettii
ENSSLDG00000023255	srsf5b	88	73.684	ENSPPAG00000029921	SRSF5	92	73.846	Pan_paniscus
ENSSLDG00000023255	srsf5b	88	73.684	ENSPPRG00000012903	SRSF5	92	73.684	Panthera_pardus
ENSSLDG00000023255	srsf5b	88	73.684	ENSPTIG00000018589	SRSF5	92	73.684	Panthera_tigris_altaica
ENSSLDG00000023255	srsf5b	88	73.684	ENSPTRG00000006488	SRSF5	92	73.846	Pan_troglodytes
ENSSLDG00000023255	srsf5b	88	73.684	ENSPANG00000021091	SRSF5	92	73.846	Papio_anubis
ENSSLDG00000023255	srsf5b	84	74.219	ENSPSIG00000012522	SRSF5	94	75.665	Pelodiscus_sinensis
ENSSLDG00000023255	srsf5b	88	92.537	ENSPMGG00000021646	srsf5b	95	92.537	Periophthalmus_magnuspinnatus
ENSSLDG00000023255	srsf5b	84	75.000	ENSPEMG00000020173	Srsf5	93	68.321	Peromyscus_maniculatus_bairdii
ENSSLDG00000023255	srsf5b	84	57.664	ENSPMAG00000007790	srsf5b	86	55.094	Petromyzon_marinus
ENSSLDG00000023255	srsf5b	84	74.219	ENSPCIG00000011877	SRSF5	94	73.764	Phascolarctos_cinereus
ENSSLDG00000023255	srsf5b	92	93.309	ENSPFOG00000017700	srsf5b	89	93.309	Poecilia_formosa
ENSSLDG00000023255	srsf5b	92	92.593	ENSPLAG00000006480	srsf5b	89	90.741	Poecilia_latipinna
ENSSLDG00000023255	srsf5b	100	97.368	ENSPMEG00000012751	srsf5b	100	97.368	Poecilia_mexicana
ENSSLDG00000023255	srsf5b	92	93.309	ENSPREG00000010381	srsf5b	89	93.309	Poecilia_reticulata
ENSSLDG00000023255	srsf5b	84	75.000	ENSPPYG00000005945	SRSF5	90	73.846	Pongo_abelii
ENSSLDG00000023255	srsf5b	84	73.438	ENSPCAG00000004405	SRSF5	100	77.632	Procavia_capensis
ENSSLDG00000023255	srsf5b	88	73.684	ENSPCOG00000014442	SRSF5	93	72.830	Propithecus_coquereli
ENSSLDG00000023255	srsf5b	100	87.713	ENSPNYG00000002669	srsf5b	94	99.219	Pundamilia_nyererei
ENSSLDG00000023255	srsf5b	100	89.474	ENSPNAG00000011262	srsf5b	100	86.184	Pygocentrus_nattereri
ENSSLDG00000023255	srsf5b	84	75.000	ENSRNOG00000005513	Srsf5	93	68.321	Rattus_norvegicus
ENSSLDG00000023255	srsf5b	88	73.684	ENSRBIG00000013003	SRSF5	92	73.846	Rhinopithecus_bieti
ENSSLDG00000023255	srsf5b	88	73.684	ENSRROG00000043407	SRSF5	92	73.846	Rhinopithecus_roxellana
ENSSLDG00000023255	srsf5b	88	73.684	ENSSBOG00000030784	SRSF5	92	73.846	Saimiri_boliviensis_boliviensis
ENSSLDG00000023255	srsf5b	84	74.219	ENSSHAG00000002871	SRSF5	94	73.764	Sarcophilus_harrisii
ENSSLDG00000023255	srsf5b	93	84.106	ENSSMAG00000019728	srsf5b	91	84.899	Scophthalmus_maximus
ENSSLDG00000023255	srsf5b	89	100.000	ENSSDUG00000005766	srsf5b	92	100.000	Seriola_dumerili
ENSSLDG00000023255	srsf5b	63	71.351	ENSSARG00000001059	SRSF5	93	62.264	Sorex_araneus
ENSSLDG00000023255	srsf5b	88	74.638	ENSSPUG00000002464	SRSF5	94	71.956	Sphenodon_punctatus
ENSSLDG00000023255	srsf5b	100	97.270	ENSSPAG00000015325	srsf5b	100	97.270	Stegastes_partitus
ENSSLDG00000023255	srsf5b	84	75.000	ENSSSCG00000032583	SRSF5	92	66.792	Sus_scrofa
ENSSLDG00000023255	srsf5b	84	75.781	ENSTGUG00000011425	SRSF5	93	72.901	Taeniopygia_guttata
ENSSLDG00000023255	srsf5b	84	90.625	ENSTRUG00000017811	srsf5b	95	78.595	Takifugu_rubripes
ENSSLDG00000023255	srsf5b	92	84.444	ENSTNIG00000016411	srsf5b	95	75.000	Tetraodon_nigroviridis
ENSSLDG00000023255	srsf5b	84	75.781	ENSTBEG00000001972	SRSF5	93	70.455	Tupaia_belangeri
ENSSLDG00000023255	srsf5b	84	74.016	ENSTTRG00000003318	SRSF5	92	72.727	Tursiops_truncatus
ENSSLDG00000023255	srsf5b	84	75.000	ENSUAMG00000014184	SRSF5	92	72.830	Ursus_americanus
ENSSLDG00000023255	srsf5b	84	75.000	ENSUMAG00000009827	SRSF5	92	66.412	Ursus_maritimus
ENSSLDG00000023255	srsf5b	84	75.000	ENSVPAG00000006448	SRSF5	93	72.830	Vicugna_pacos
ENSSLDG00000023255	srsf5b	84	75.000	ENSVVUG00000003790	SRSF5	92	72.830	Vulpes_vulpes
ENSSLDG00000023255	srsf5b	84	79.070	ENSXETG00000002211	srsf5	92	73.664	Xenopus_tropicalis
ENSSLDG00000023255	srsf5b	84	98.450	ENSXCOG00000001570	srsf5b	89	87.778	Xiphophorus_couchianus
ENSSLDG00000023255	srsf5b	100	96.732	ENSXMAG00000026416	srsf5b	100	96.732	Xiphophorus_maculatus