EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000023264 (Gene tree)
Gene ID: -
Gene Symbol: gar1
Alias: nola1|zgc:56086
Full Name: GAR1 ribonucleoprotein
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 3497 bases
Position: chrPEQF01099586.1:742401-745897
Accession: 111648305
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000030172	Gar1	PF04410.14	6.3e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000031046	-	1904	XM_023398154	ENSSLDP00000030172	213 (aa)	XP_023253922	UPI000C6FA8B7

Gene Model

Click here to download ENSSLDG00000023264's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000023264's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000023264	gar1	51	99.074	ENSAPOG00000019754	gar1	51	99.074	Acanthochromis_polyacanthus
ENSSLDG00000023264	gar1	50	92.523	ENSAMEG00000004605	GAR1	52	92.523	Ailuropoda_melanoleuca
ENSSLDG00000023264	gar1	51	99.074	ENSAOCG00000020947	gar1	50	99.074	Amphiprion_ocellaris
ENSSLDG00000023264	gar1	51	99.074	ENSAPEG00000001676	gar1	50	99.074	Amphiprion_percula
ENSSLDG00000023264	gar1	51	98.148	ENSATEG00000003733	gar1	50	98.148	Anabas_testudineus
ENSSLDG00000023264	gar1	50	88.679	ENSAPLG00000010926	GAR1	59	88.679	Anas_platyrhynchos
ENSSLDG00000023264	gar1	50	91.509	ENSACAG00000010031	GAR1	50	91.509	Anolis_carolinensis
ENSSLDG00000023264	gar1	52	98.182	ENSACLG00000010029	gar1	57	88.889	Astatotilapia_calliptera
ENSSLDG00000023264	gar1	52	90.909	ENSAMXG00000015752	gar1	66	76.974	Astyanax_mexicanus
ENSSLDG00000023264	gar1	50	93.458	ENSBTAG00000000748	GAR1	51	93.458	Bos_taurus
ENSSLDG00000023264	gar1	52	91.818	ENSCHIG00000016026	-	51	93.458	Capra_hircus
ENSSLDG00000023264	gar1	50	93.458	ENSTSYG00000013668	-	50	93.458	Carlito_syrichta
ENSSLDG00000023264	gar1	50	85.047	ENSTSYG00000026632	-	55	85.047	Carlito_syrichta
ENSSLDG00000023264	gar1	52	91.818	ENSCATG00000021854	GAR1	54	93.458	Cercocebus_atys
ENSSLDG00000023264	gar1	52	90.909	ENSCLAG00000005335	GAR1	69	96.364	Chinchilla_lanigera
ENSSLDG00000023264	gar1	50	91.589	ENSCSAG00000003922	GAR1	54	93.458	Chlorocebus_sabaeus
ENSSLDG00000023264	gar1	50	92.453	ENSCPBG00000004310	GAR1	54	92.453	Chrysemys_picta_bellii
ENSSLDG00000023264	gar1	50	95.327	ENSCGRG00001003919	Gar1	69	86.184	Cricetulus_griseus_chok1gshd
ENSSLDG00000023264	gar1	51	97.222	ENSCVAG00000002103	gar1	52	97.222	Cyprinodon_variegatus
ENSSLDG00000023264	gar1	50	96.262	ENSDARG00000076526	gar1	73	81.818	Danio_rerio
ENSSLDG00000023264	gar1	55	91.525	ENSDNOG00000037632	GAR1	54	92.523	Dasypus_novemcinctus
ENSSLDG00000023264	gar1	52	92.727	ENSEASG00005004658	GAR1	50	94.393	Equus_asinus_asinus
ENSSLDG00000023264	gar1	52	91.818	ENSECAG00000013624	GAR1	54	93.458	Equus_caballus
ENSSLDG00000023264	gar1	50	56.075	ENSFCAG00000025841	-	50	58.879	Felis_catus
ENSSLDG00000023264	gar1	50	93.458	ENSFCAG00000040791	-	51	93.458	Felis_catus
ENSSLDG00000023264	gar1	52	96.396	ENSFHEG00000008068	gar1	50	96.296	Fundulus_heteroclitus
ENSSLDG00000023264	gar1	52	72.973	ENSGGOG00000036205	-	53	74.766	Gorilla_gorilla
ENSSLDG00000023264	gar1	73	93.590	ENSHBUG00000023860	gar1	79	93.590	Haplochromis_burtoni
ENSSLDG00000023264	gar1	50	94.393	ENSHGLG00000000493	GAR1	72	98.182	Heterocephalus_glaber_female
ENSSLDG00000023264	gar1	51	96.296	ENSHCOG00000008656	gar1	66	90.345	Hippocampus_comes
ENSSLDG00000023264	gar1	52	97.273	ENSIPUG00000003194	gar1	75	83.648	Ictalurus_punctatus
ENSSLDG00000023264	gar1	51	90.826	ENSSTOG00000005577	GAR1	71	96.364	Ictidomys_tridecemlineatus
ENSSLDG00000023264	gar1	52	94.595	ENSKMAG00000010402	gar1	51	95.370	Kryptolebias_marmoratus
ENSSLDG00000023264	gar1	80	85.124	ENSLACG00000003306	GAR1	64	88.679	Latimeria_chalumnae
ENSSLDG00000023264	gar1	51	79.630	ENSMFAG00000003572	-	52	79.439	Macaca_fascicularis
ENSSLDG00000023264	gar1	52	98.182	ENSMZEG00005001281	gar1	57	88.889	Maylandia_zebra
ENSSLDG00000023264	gar1	50	95.327	ENSMAUG00000016788	Gar1	96	94.805	Mesocricetus_auratus
ENSSLDG00000023264	gar1	50	94.393	ENSMOCG00000001340	Gar1	70	98.182	Microtus_ochrogaster
ENSSLDG00000023264	gar1	50	96.262	ENSMMOG00000004156	gar1	53	95.370	Mola_mola
ENSSLDG00000023264	gar1	54	86.842	ENSMODG00000005897	GAR1	67	68.553	Monodelphis_domestica
ENSSLDG00000023264	gar1	50	95.327	ENSMALG00000009672	gar1	50	94.444	Monopterus_albus
ENSSLDG00000023264	gar1	50	94.393	MGP_CAROLIEiJ_G0025627	Gar1	96	94.805	Mus_caroli
ENSSLDG00000023264	gar1	52	92.727	ENSMUSG00000028010	Gar1	96	94.805	Mus_musculus
ENSSLDG00000023264	gar1	52	92.727	MGP_PahariEiJ_G0027076	Gar1	96	94.805	Mus_pahari
ENSSLDG00000023264	gar1	52	92.727	MGP_SPRETEiJ_G0026580	Gar1	96	94.805	Mus_spretus
ENSSLDG00000023264	gar1	50	93.458	ENSMPUG00000008615	GAR1	51	93.458	Mustela_putorius_furo
ENSSLDG00000023264	gar1	52	91.818	ENSNGAG00000008268	Gar1	71	96.364	Nannospalax_galili
ENSSLDG00000023264	gar1	52	91.818	ENSNLEG00000016578	GAR1	50	93.458	Nomascus_leucogenys
ENSSLDG00000023264	gar1	50	92.523	ENSODEG00000011083	GAR1	55	92.523	Octodon_degus
ENSSLDG00000023264	gar1	50	93.458	ENSOCUG00000003901	GAR1	50	93.458	Oryctolagus_cuniculus
ENSSLDG00000023264	gar1	50	93.458	ENSOGAG00000004693	GAR1	50	93.458	Otolemur_garnettii
ENSSLDG00000023264	gar1	50	93.458	ENSOARG00000004910	GAR1	51	93.458	Ovis_aries
ENSSLDG00000023264	gar1	50	93.458	ENSPPAG00000014081	GAR1	54	93.458	Pan_paniscus
ENSSLDG00000023264	gar1	50	93.458	ENSPPRG00000023697	GAR1	51	93.458	Panthera_pardus
ENSSLDG00000023264	gar1	50	93.458	ENSPTIG00000021565	GAR1	51	93.458	Panthera_tigris_altaica
ENSSLDG00000023264	gar1	52	91.818	ENSPTRG00000016364	GAR1	54	93.458	Pan_troglodytes
ENSSLDG00000023264	gar1	78	88.406	ENSPEMG00000015838	Gar1	96	94.805	Peromyscus_maniculatus_bairdii
ENSSLDG00000023264	gar1	54	86.842	ENSPCIG00000018912	GAR1	62	70.068	Phascolarctos_cinereus
ENSSLDG00000023264	gar1	51	95.370	ENSPFOG00000024155	gar1	51	95.370	Poecilia_formosa
ENSSLDG00000023264	gar1	51	95.370	ENSPLAG00000015056	gar1	51	95.370	Poecilia_latipinna
ENSSLDG00000023264	gar1	51	96.296	ENSPMEG00000009320	gar1	52	96.296	Poecilia_mexicana
ENSSLDG00000023264	gar1	50	91.589	ENSPCOG00000027049	GAR1	55	93.458	Propithecus_coquereli
ENSSLDG00000023264	gar1	52	98.182	ENSPNYG00000020926	gar1	62	83.784	Pundamilia_nyererei
ENSSLDG00000023264	gar1	52	93.636	ENSPNAG00000019686	gar1	68	77.976	Pygocentrus_nattereri
ENSSLDG00000023264	gar1	51	95.370	ENSRNOG00000061146	Gar1	63	95.327	Rattus_norvegicus
ENSSLDG00000023264	gar1	53	75.893	ENSRBIG00000042411	-	52	76.636	Rhinopithecus_bieti
ENSSLDG00000023264	gar1	50	93.458	ENSRBIG00000019547	GAR1	54	93.458	Rhinopithecus_bieti
ENSSLDG00000023264	gar1	73	69.677	ENSRROG00000044348	-	69	72.414	Rhinopithecus_roxellana
ENSSLDG00000023264	gar1	52	91.818	ENSRROG00000028454	GAR1	54	93.458	Rhinopithecus_roxellana
ENSSLDG00000023264	gar1	50	93.458	ENSSBOG00000024785	GAR1	50	93.458	Saimiri_boliviensis_boliviensis
ENSSLDG00000023264	gar1	51	97.222	ENSSMAG00000009976	gar1	50	97.222	Scophthalmus_maximus
ENSSLDG00000023264	gar1	50	93.396	ENSSPUG00000008707	GAR1	59	93.396	Sphenodon_punctatus
ENSSLDG00000023264	gar1	51	99.074	ENSSPAG00000005974	gar1	64	91.096	Stegastes_partitus
ENSSLDG00000023264	gar1	52	91.818	ENSSSCG00000009137	GAR1	53	93.458	Sus_scrofa
ENSSLDG00000023264	gar1	51	95.370	ENSTRUG00000020580	gar1	52	95.370	Takifugu_rubripes
ENSSLDG00000023264	gar1	50	93.458	ENSUMAG00000000776	GAR1	52	93.458	Ursus_maritimus
ENSSLDG00000023264	gar1	50	93.458	ENSVVUG00000017612	GAR1	55	93.458	Vulpes_vulpes