EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000023347 (Gene tree)
Gene ID: -
Gene Symbol: si:ch1073-335m2.2
Alias: -
Full Name: msx2-interacting protein-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 18576 bases
Position: chrPEQF01099001.1:670146-688721
Accession: 111660777
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000030326	RRM_5	PF13893.6	2.9e-08	1	2
ENSSLDP00000030326	RRM_5	PF13893.6	2.9e-08	2	2
ENSSLDP00000030326	RRM_1	PF00076.22	1.8e-42	1	3
ENSSLDP00000030326	RRM_1	PF00076.22	1.8e-42	2	3
ENSSLDP00000030326	RRM_1	PF00076.22	1.8e-42	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000031202	-	9342	XM_023414170	ENSSLDP00000030326	3113 (aa)	XP_023269938	-

Gene Model

Click here to download ENSSLDG00000023347's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000023347's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000023347	si:ch1073-335m2.2	99	80.541	ENSSLDG00000012950	-	96	76.355

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000023347	si:ch1073-335m2.2	76	83.041	ENSG00000065526	SPEN	85	85.259	Homo_sapiens
ENSSLDG00000023347	si:ch1073-335m2.2	100	78.931	ENSAPOG00000011411	si:ch1073-335m2.2	100	79.511	Acanthochromis_polyacanthus
ENSSLDG00000023347	si:ch1073-335m2.2	99	79.459	ENSAPOG00000009853	-	98	75.369	Acanthochromis_polyacanthus
ENSSLDG00000023347	si:ch1073-335m2.2	51	83.626	ENSAMEG00000011817	SPEN	76	83.626	Ailuropoda_melanoleuca
ENSSLDG00000023347	si:ch1073-335m2.2	89	82.810	ENSAOCG00000008077	si:ch1073-335m2.2	99	77.266	Amphiprion_ocellaris
ENSSLDG00000023347	si:ch1073-335m2.2	99	79.459	ENSAOCG00000014505	-	98	75.369	Amphiprion_ocellaris
ENSSLDG00000023347	si:ch1073-335m2.2	99	79.459	ENSAPEG00000010288	-	98	75.369	Amphiprion_percula
ENSSLDG00000023347	si:ch1073-335m2.2	100	79.870	ENSAPEG00000013515	si:ch1073-335m2.2	100	80.117	Amphiprion_percula
ENSSLDG00000023347	si:ch1073-335m2.2	100	81.038	ENSATEG00000007674	si:ch1073-335m2.2	100	78.269	Anabas_testudineus
ENSSLDG00000023347	si:ch1073-335m2.2	78	46.065	ENSATEG00000005627	-	97	75.862	Anabas_testudineus
ENSSLDG00000023347	si:ch1073-335m2.2	91	65.726	ENSAPLG00000012618	SPEN	97	65.726	Anas_platyrhynchos
ENSSLDG00000023347	si:ch1073-335m2.2	84	84.211	ENSACAG00000013761	SPEN	83	84.211	Anolis_carolinensis
ENSSLDG00000023347	si:ch1073-335m2.2	83	82.927	ENSANAG00000034428	SPEN	76	82.927	Aotus_nancymaae
ENSSLDG00000023347	si:ch1073-335m2.2	60	80.619	ENSACLG00000021433	si:ch1073-335m2.2	100	74.441	Astatotilapia_calliptera
ENSSLDG00000023347	si:ch1073-335m2.2	95	69.231	ENSACLG00000016922	-	94	69.231	Astatotilapia_calliptera
ENSSLDG00000023347	si:ch1073-335m2.2	99	77.540	ENSAMXG00000012485	spen	95	66.079	Astyanax_mexicanus
ENSSLDG00000023347	si:ch1073-335m2.2	85	75.124	ENSBTAG00000018729	SPEN	82	75.124	Bos_taurus
ENSSLDG00000023347	si:ch1073-335m2.2	85	79.429	ENSCJAG00000008527	SPEN	78	79.429	Callithrix_jacchus
ENSSLDG00000023347	si:ch1073-335m2.2	57	59.803	ENSCAFG00000016132	-	60	60.355	Canis_familiaris
ENSSLDG00000023347	si:ch1073-335m2.2	84	75.124	ENSCHIG00000025070	SPEN	78	75.124	Capra_hircus
ENSSLDG00000023347	si:ch1073-335m2.2	71	72.596	ENSCAPG00000013803	SPEN	63	72.596	Cavia_aperea
ENSSLDG00000023347	si:ch1073-335m2.2	71	72.596	ENSCPOG00000014036	SPEN	54	72.596	Cavia_porcellus
ENSSLDG00000023347	si:ch1073-335m2.2	56	74.627	ENSCCAG00000020258	SPEN	77	74.627	Cebus_capucinus
ENSSLDG00000023347	si:ch1073-335m2.2	84	74.627	ENSCATG00000015079	SPEN	74	77.703	Cercocebus_atys
ENSSLDG00000023347	si:ch1073-335m2.2	84	73.077	ENSCLAG00000002018	SPEN	80	73.077	Chinchilla_lanigera
ENSSLDG00000023347	si:ch1073-335m2.2	84	74.627	ENSCSAG00000000841	SPEN	75	74.627	Chlorocebus_sabaeus
ENSSLDG00000023347	si:ch1073-335m2.2	92	84.211	ENSCPBG00000010477	SPEN	84	84.211	Chrysemys_picta_bellii
ENSSLDG00000023347	si:ch1073-335m2.2	65	74.627	ENSCANG00000034547	SPEN	58	74.627	Colobus_angolensis_palliatus
ENSSLDG00000023347	si:ch1073-335m2.2	76	74.500	ENSCGRG00001007725	Spen	75	74.500	Cricetulus_griseus_chok1gshd
ENSSLDG00000023347	si:ch1073-335m2.2	100	69.196	ENSCSEG00000003915	-	98	69.196	Cynoglossus_semilaevis
ENSSLDG00000023347	si:ch1073-335m2.2	99	83.432	ENSCVAG00000016346	-	97	83.432	Cyprinodon_variegatus
ENSSLDG00000023347	si:ch1073-335m2.2	100	68.366	ENSCVAG00000009075	si:ch1073-335m2.2	100	68.542	Cyprinodon_variegatus
ENSSLDG00000023347	si:ch1073-335m2.2	100	56.429	ENSDARG00000074332	si:ch1073-335m2.2	100	56.248	Danio_rerio
ENSSLDG00000023347	si:ch1073-335m2.2	99	82.840	ENSDARG00000074245	spen	100	81.481	Danio_rerio
ENSSLDG00000023347	si:ch1073-335m2.2	89	58.073	ENSDNOG00000041948	SPEN	84	58.234	Dasypus_novemcinctus
ENSSLDG00000023347	si:ch1073-335m2.2	86	73.558	ENSDORG00000023909	Spen	85	73.558	Dipodomys_ordii
ENSSLDG00000023347	si:ch1073-335m2.2	59	64.607	ENSEBUG00000007307	-	54	64.607	Eptatretus_burgeri
ENSSLDG00000023347	si:ch1073-335m2.2	85	84.211	ENSEASG00005015911	SPEN	78	84.211	Equus_asinus_asinus
ENSSLDG00000023347	si:ch1073-335m2.2	84	84.211	ENSECAG00000008833	SPEN	78	84.211	Equus_caballus
ENSSLDG00000023347	si:ch1073-335m2.2	58	83.721	ENSEEUG00000010255	SPEN	57	83.721	Erinaceus_europaeus
ENSSLDG00000023347	si:ch1073-335m2.2	100	66.386	ENSELUG00000007726	si:ch1073-335m2.2	100	66.511	Esox_lucius
ENSSLDG00000023347	si:ch1073-335m2.2	80	55.696	ENSFALG00000003551	SPEN	97	55.696	Ficedula_albicollis
ENSSLDG00000023347	si:ch1073-335m2.2	75	83.432	ENSFDAG00000010212	SPEN	75	83.432	Fukomys_damarensis
ENSSLDG00000023347	si:ch1073-335m2.2	100	68.314	ENSFHEG00000004544	si:ch1073-335m2.2	100	68.222	Fundulus_heteroclitus
ENSSLDG00000023347	si:ch1073-335m2.2	100	67.515	ENSGMOG00000008156	si:ch1073-335m2.2	100	67.331	Gadus_morhua
ENSSLDG00000023347	si:ch1073-335m2.2	75	68.161	ENSGMOG00000008397	-	73	79.769	Gadus_morhua
ENSSLDG00000023347	si:ch1073-335m2.2	73	74.163	ENSGALG00000036932	SPEN	94	74.163	Gallus_gallus
ENSSLDG00000023347	si:ch1073-335m2.2	98	83.432	ENSGAFG00000015819	-	98	64.754	Gambusia_affinis
ENSSLDG00000023347	si:ch1073-335m2.2	100	64.591	ENSGACG00000005341	-	96	68.329	Gasterosteus_aculeatus
ENSSLDG00000023347	si:ch1073-335m2.2	100	76.990	ENSGACG00000001176	si:ch1073-335m2.2	100	77.171	Gasterosteus_aculeatus
ENSSLDG00000023347	si:ch1073-335m2.2	85	84.211	ENSGAGG00000020785	SPEN	85	84.211	Gopherus_agassizii
ENSSLDG00000023347	si:ch1073-335m2.2	76	74.129	ENSGGOG00000012041	SPEN	74	74.129	Gorilla_gorilla
ENSSLDG00000023347	si:ch1073-335m2.2	95	69.683	ENSHBUG00000020626	-	93	69.683	Haplochromis_burtoni
ENSSLDG00000023347	si:ch1073-335m2.2	100	78.211	ENSHBUG00000023253	si:ch1073-335m2.2	100	78.243	Haplochromis_burtoni
ENSSLDG00000023347	si:ch1073-335m2.2	64	73.077	ENSHGLG00000019259	SPEN	56	73.077	Heterocephalus_glaber_female
ENSSLDG00000023347	si:ch1073-335m2.2	62	73.077	ENSHGLG00100019294	SPEN	56	73.077	Heterocephalus_glaber_male
ENSSLDG00000023347	si:ch1073-335m2.2	96	70.605	ENSHCOG00000006004	si:ch1073-335m2.2	99	70.542	Hippocampus_comes
ENSSLDG00000023347	si:ch1073-335m2.2	96	56.345	ENSIPUG00000018212	si:ch1073-335m2.2	99	56.550	Ictalurus_punctatus
ENSSLDG00000023347	si:ch1073-335m2.2	94	72.727	ENSIPUG00000021668	spen	98	72.727	Ictalurus_punctatus
ENSSLDG00000023347	si:ch1073-335m2.2	67	83.626	ENSSTOG00000021428	SPEN	65	56.811	Ictidomys_tridecemlineatus
ENSSLDG00000023347	si:ch1073-335m2.2	80	63.137	ENSJJAG00000010882	Spen	77	63.137	Jaculus_jaculus
ENSSLDG00000023347	si:ch1073-335m2.2	100	74.295	ENSKMAG00000021725	si:ch1073-335m2.2	100	74.142	Kryptolebias_marmoratus
ENSSLDG00000023347	si:ch1073-335m2.2	100	76.472	ENSLBEG00000020855	si:ch1073-335m2.2	100	76.641	Labrus_bergylta
ENSSLDG00000023347	si:ch1073-335m2.2	69	81.657	ENSLBEG00000019129	-	78	73.000	Labrus_bergylta
ENSSLDG00000023347	si:ch1073-335m2.2	91	84.211	ENSLACG00000003258	SPEN	86	84.211	Latimeria_chalumnae
ENSSLDG00000023347	si:ch1073-335m2.2	100	57.419	ENSLOCG00000007896	si:ch1073-335m2.2	95	76.552	Lepisosteus_oculatus
ENSSLDG00000023347	si:ch1073-335m2.2	77	84.615	ENSLAFG00000004524	SPEN	76	84.615	Loxodonta_africana
ENSSLDG00000023347	si:ch1073-335m2.2	84	74.627	ENSMFAG00000041974	SPEN	75	74.627	Macaca_fascicularis
ENSSLDG00000023347	si:ch1073-335m2.2	77	74.627	ENSMMUG00000008026	SPEN	76	74.627	Macaca_mulatta
ENSSLDG00000023347	si:ch1073-335m2.2	84	74.627	ENSMNEG00000042402	SPEN	75	74.627	Macaca_nemestrina
ENSSLDG00000023347	si:ch1073-335m2.2	84	74.627	ENSMLEG00000039293	SPEN	75	74.627	Mandrillus_leucophaeus
ENSSLDG00000023347	si:ch1073-335m2.2	100	79.121	ENSMAMG00000023870	si:ch1073-335m2.2	100	78.629	Mastacembelus_armatus
ENSSLDG00000023347	si:ch1073-335m2.2	82	69.231	ENSMZEG00005021491	-	91	69.231	Maylandia_zebra
ENSSLDG00000023347	si:ch1073-335m2.2	60	80.670	ENSMZEG00005011762	si:ch1073-335m2.2	100	74.518	Maylandia_zebra
ENSSLDG00000023347	si:ch1073-335m2.2	76	83.626	ENSMAUG00000008318	Spen	86	83.626	Mesocricetus_auratus
ENSSLDG00000023347	si:ch1073-335m2.2	69	74.627	ENSMICG00000030994	SPEN	83	74.627	Microcebus_murinus
ENSSLDG00000023347	si:ch1073-335m2.2	77	83.626	ENSMOCG00000016083	Spen	72	83.626	Microtus_ochrogaster
ENSSLDG00000023347	si:ch1073-335m2.2	86	80.702	ENSMODG00000003411	SPEN	80	80.702	Monodelphis_domestica
ENSSLDG00000023347	si:ch1073-335m2.2	99	78.919	ENSMALG00000008625	-	96	74.384	Monopterus_albus
ENSSLDG00000023347	si:ch1073-335m2.2	81	66.116	MGP_CAROLIEiJ_G0026745	Spen	71	67.175	Mus_caroli
ENSSLDG00000023347	si:ch1073-335m2.2	80	83.626	MGP_PahariEiJ_G0029076	Spen	70	83.626	Mus_pahari
ENSSLDG00000023347	si:ch1073-335m2.2	50	65.587	MGP_SPRETEiJ_G0027724	Spen	73	67.175	Mus_spretus
ENSSLDG00000023347	si:ch1073-335m2.2	61	83.626	ENSMPUG00000016317	SPEN	60	83.626	Mustela_putorius_furo
ENSSLDG00000023347	si:ch1073-335m2.2	82	81.250	ENSMLUG00000010144	SPEN	99	69.088	Myotis_lucifugus
ENSSLDG00000023347	si:ch1073-335m2.2	93	56.734	ENSNGAG00000000641	Spen	83	66.784	Nannospalax_galili
ENSSLDG00000023347	si:ch1073-335m2.2	60	81.747	ENSNBRG00000005733	si:ch1073-335m2.2	100	74.521	Neolamprologus_brichardi
ENSSLDG00000023347	si:ch1073-335m2.2	71	70.136	ENSNBRG00000022090	-	90	70.136	Neolamprologus_brichardi
ENSSLDG00000023347	si:ch1073-335m2.2	76	74.129	ENSNLEG00000007652	SPEN	75	74.129	Nomascus_leucogenys
ENSSLDG00000023347	si:ch1073-335m2.2	78	81.053	ENSMEUG00000002422	SPEN	72	81.053	Notamacropus_eugenii
ENSSLDG00000023347	si:ch1073-335m2.2	59	74.146	ENSOPRG00000015800	SPEN	72	74.146	Ochotona_princeps
ENSSLDG00000023347	si:ch1073-335m2.2	70	74.129	ENSODEG00000016644	SPEN	65	74.129	Octodon_degus
ENSSLDG00000023347	si:ch1073-335m2.2	100	69.683	ENSONIG00000006573	-	99	74.007	Oreochromis_niloticus
ENSSLDG00000023347	si:ch1073-335m2.2	63	74.038	ENSOCUG00000010840	SPEN	75	74.038	Oryctolagus_cuniculus
ENSSLDG00000023347	si:ch1073-335m2.2	74	45.990	ENSORLG00000028894	-	81	68.539	Oryzias_latipes
ENSSLDG00000023347	si:ch1073-335m2.2	60	74.421	ENSORLG00020009351	si:ch1073-335m2.2	60	74.139	Oryzias_latipes_hni
ENSSLDG00000023347	si:ch1073-335m2.2	74	46.963	ENSORLG00020007735	-	63	68.315	Oryzias_latipes_hni
ENSSLDG00000023347	si:ch1073-335m2.2	60	75.694	ENSORLG00015005537	si:ch1073-335m2.2	97	75.445	Oryzias_latipes_hsok
ENSSLDG00000023347	si:ch1073-335m2.2	92	49.661	ENSOMEG00000007639	-	93	50.494	Oryzias_melastigma
ENSSLDG00000023347	si:ch1073-335m2.2	60	77.549	ENSOMEG00000004509	si:ch1073-335m2.2	60	77.232	Oryzias_melastigma
ENSSLDG00000023347	si:ch1073-335m2.2	63	81.006	ENSOGAG00000025110	SPEN	80	75.622	Otolemur_garnettii
ENSSLDG00000023347	si:ch1073-335m2.2	84	75.124	ENSOARG00000008477	SPEN	80	75.124	Ovis_aries
ENSSLDG00000023347	si:ch1073-335m2.2	76	74.129	ENSPPAG00000035690	SPEN	76	74.129	Pan_paniscus
ENSSLDG00000023347	si:ch1073-335m2.2	76	74.129	ENSPTRG00000000210	SPEN	76	74.129	Pan_troglodytes
ENSSLDG00000023347	si:ch1073-335m2.2	84	74.627	ENSPANG00000006293	SPEN	75	74.627	Papio_anubis
ENSSLDG00000023347	si:ch1073-335m2.2	100	50.616	ENSPKIG00000002617	SPEN	91	69.318	Paramormyrops_kingsleyae
ENSSLDG00000023347	si:ch1073-335m2.2	96	92.857	ENSPKIG00000010492	si:ch1073-335m2.2	66	92.857	Paramormyrops_kingsleyae
ENSSLDG00000023347	si:ch1073-335m2.2	69	81.921	ENSPSIG00000008026	SPEN	66	72.685	Pelodiscus_sinensis
ENSSLDG00000023347	si:ch1073-335m2.2	76	74.129	ENSPPYG00000001834	SPEN	76	74.129	Pongo_abelii
ENSSLDG00000023347	si:ch1073-335m2.2	74	73.558	ENSPCAG00000009543	SPEN	70	73.558	Procavia_capensis
ENSSLDG00000023347	si:ch1073-335m2.2	89	72.277	ENSPCOG00000021735	SPEN	82	72.277	Propithecus_coquereli
ENSSLDG00000023347	si:ch1073-335m2.2	64	81.871	ENSPVAG00000013794	SPEN	59	81.871	Pteropus_vampyrus
ENSSLDG00000023347	si:ch1073-335m2.2	95	69.683	ENSPNYG00000012379	-	92	69.683	Pundamilia_nyererei
ENSSLDG00000023347	si:ch1073-335m2.2	60	81.799	ENSPNYG00000009042	si:ch1073-335m2.2	100	74.722	Pundamilia_nyererei
ENSSLDG00000023347	si:ch1073-335m2.2	99	78.035	ENSPNAG00000020795	spen	98	72.222	Pygocentrus_nattereri
ENSSLDG00000023347	si:ch1073-335m2.2	63	74.627	ENSRNOG00000033556	Spen	79	74.627	Rattus_norvegicus
ENSSLDG00000023347	si:ch1073-335m2.2	86	74.627	ENSRBIG00000039654	SPEN	79	74.627	Rhinopithecus_bieti
ENSSLDG00000023347	si:ch1073-335m2.2	83	74.627	ENSRROG00000035686	SPEN	75	74.627	Rhinopithecus_roxellana
ENSSLDG00000023347	si:ch1073-335m2.2	87	44.488	ENSSBOG00000028770	SPEN	83	44.644	Saimiri_boliviensis_boliviensis
ENSSLDG00000023347	si:ch1073-335m2.2	69	72.115	ENSSHAG00000004960	SPEN	99	69.274	Sarcophilus_harrisii
ENSSLDG00000023347	si:ch1073-335m2.2	87	77.083	ENSSFOG00015007131	si:ch1073-335m2.2	95	77.083	Scleropages_formosus
ENSSLDG00000023347	si:ch1073-335m2.2	99	86.550	ENSSFOG00015010267	si:ch1073-335m2.2	95	86.550	Scleropages_formosus
ENSSLDG00000023347	si:ch1073-335m2.2	99	80.000	ENSSMAG00000008996	-	95	79.144	Scophthalmus_maximus
ENSSLDG00000023347	si:ch1073-335m2.2	99	80.541	ENSSDUG00000003476	-	96	76.355	Seriola_dumerili
ENSSLDG00000023347	si:ch1073-335m2.2	100	97.837	ENSSDUG00000008416	si:ch1073-335m2.2	100	89.859	Seriola_dumerili
ENSSLDG00000023347	si:ch1073-335m2.2	66	69.820	ENSSPAG00000006014	-	91	68.726	Stegastes_partitus
ENSSLDG00000023347	si:ch1073-335m2.2	76	57.657	ENSSSCG00000034484	SPEN	81	58.172	Sus_scrofa
ENSSLDG00000023347	si:ch1073-335m2.2	100	41.956	ENSTRUG00000024350	-	97	66.555	Takifugu_rubripes
ENSSLDG00000023347	si:ch1073-335m2.2	99	79.670	ENSTNIG00000010907	-	100	41.973	Tetraodon_nigroviridis
ENSSLDG00000023347	si:ch1073-335m2.2	100	70.992	ENSTNIG00000014666	si:ch1073-335m2.2	100	71.105	Tetraodon_nigroviridis
ENSSLDG00000023347	si:ch1073-335m2.2	50	83.626	ENSTBEG00000003628	SPEN	54	83.626	Tupaia_belangeri
ENSSLDG00000023347	si:ch1073-335m2.2	58	83.626	ENSTTRG00000015704	SPEN	52	83.626	Tursiops_truncatus
ENSSLDG00000023347	si:ch1073-335m2.2	70	84.211	ENSUAMG00000009600	SPEN	78	84.211	Ursus_americanus
ENSSLDG00000023347	si:ch1073-335m2.2	65	84.211	ENSUMAG00000021641	SPEN	73	84.211	Ursus_maritimus
ENSSLDG00000023347	si:ch1073-335m2.2	58	92.857	ENSVVUG00000028951	SPEN	56	92.857	Vulpes_vulpes
ENSSLDG00000023347	si:ch1073-335m2.2	54	67.811	ENSXETG00000023114	SPEN	69	67.811	Xenopus_tropicalis
ENSSLDG00000023347	si:ch1073-335m2.2	100	70.286	ENSXCOG00000004516	si:ch1073-335m2.2	100	70.097	Xiphophorus_couchianus
ENSSLDG00000023347	si:ch1073-335m2.2	100	70.610	ENSXMAG00000029887	si:ch1073-335m2.2	100	70.557	Xiphophorus_maculatus