EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000023487 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: pre-mRNA processing factor 38B
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 4245 bases
Position: chrPEQF01098769.1:202697-206941
Accession: 111654803
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000030522	PRP38	PF03371.15	9.2e-55	1	1
ENSSLDP00000030524	PRP38	PF03371.15	2e-45	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000031401	-	1404	XM_023405941	ENSSLDP00000030522	467 (aa)	XP_023261709	UPI000C6F7F2E
ENSSLDT00000031403	-	555	-	ENSSLDP00000030524	184 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000023487's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000023487's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000023487	-	90	96.364	ENSACIG00000016459	-	96	96.364	Amphilophus_citrinellus
ENSSLDG00000023487	-	100	93.590	ENSATEG00000014482	-	100	93.162	Anabas_testudineus
ENSSLDG00000023487	-	83	91.558	ENSBTAG00000047874	PRPF38B	85	62.398	Bos_taurus
ENSSLDG00000023487	-	79	55.862	WBGene00022434	Y108G3AL.2	66	51.818	Caenorhabditis_elegans
ENSSLDG00000023487	-	73	93.333	ENSCAFG00020010992	-	81	55.882	Canis_lupus_dingo
ENSSLDG00000023487	-	83	91.558	ENSCHIG00000024357	-	85	62.398	Capra_hircus
ENSSLDG00000023487	-	82	92.763	ENSCPOG00000039545	-	82	63.771	Cavia_porcellus
ENSSLDG00000023487	-	82	92.763	ENSCLAG00000005801	-	83	63.333	Chinchilla_lanigera
ENSSLDG00000023487	-	63	92.241	ENSCHOG00000008972	-	95	60.632	Choloepus_hoffmanni
ENSSLDG00000023487	-	86	90.000	ENSCPBG00000028299	-	83	64.742	Chrysemys_picta_bellii
ENSSLDG00000023487	-	80	72.973	ENSCSAVG00000009443	-	71	73.958	Ciona_savignyi
ENSSLDG00000023487	-	100	87.821	ENSCSEG00000015030	-	100	86.111	Cynoglossus_semilaevis
ENSSLDG00000023487	-	99	95.082	ENSCVAG00000005543	-	88	95.082	Cyprinodon_variegatus
ENSSLDG00000023487	-	85	69.872	FBgn0030468	CG1622	93	70.229	Drosophila_melanogaster
ENSSLDG00000023487	-	78	93.103	ENSETEG00000014690	-	92	64.045	Echinops_telfairi
ENSSLDG00000023487	-	89	87.574	ENSELUG00000010390	-	97	67.939	Esox_lucius
ENSSLDG00000023487	-	51	93.617	ENSFALG00000002673	-	86	59.645	Ficedula_albicollis
ENSSLDG00000023487	-	89	92.683	ENSGMOG00000012080	-	99	74.059	Gadus_morhua
ENSSLDG00000023487	-	86	89.873	ENSGALG00000001972	-	92	61.942	Gallus_gallus
ENSSLDG00000023487	-	89	95.122	ENSGAFG00000008943	-	100	84.402	Gambusia_affinis
ENSSLDG00000023487	-	86	90.000	ENSGAGG00000001563	-	83	64.948	Gopherus_agassizii
ENSSLDG00000023487	-	82	92.763	ENSHGLG00000016583	PRPF38B	83	63.202	Heterocephalus_glaber_female
ENSSLDG00000023487	-	82	92.763	ENSHGLG00100015525	-	83	63.169	Heterocephalus_glaber_male
ENSSLDG00000023487	-	89	93.902	ENSHCOG00000001071	-	100	82.051	Hippocampus_comes
ENSSLDG00000023487	-	100	86.105	ENSKMAG00000005540	-	100	85.895	Kryptolebias_marmoratus
ENSSLDG00000023487	-	80	91.216	ENSLACG00000015511	-	97	56.180	Latimeria_chalumnae
ENSSLDG00000023487	-	83	92.157	ENSMOCG00000020285	-	82	62.633	Microtus_ochrogaster
ENSSLDG00000023487	-	100	89.530	ENSMMOG00000011639	-	100	88.889	Mola_mola
ENSSLDG00000023487	-	80	93.919	ENSMODG00000002350	-	86	83.032	Monodelphis_domestica
ENSSLDG00000023487	-	100	92.094	ENSMALG00000019479	-	100	91.667	Monopterus_albus
ENSSLDG00000023487	-	90	96.364	ENSNBRG00000019221	-	98	96.364	Neolamprologus_brichardi
ENSSLDG00000023487	-	100	92.949	ENSONIG00000010129	-	100	92.949	Oreochromis_niloticus
ENSSLDG00000023487	-	83	92.208	ENSOANG00000007343	-	92	61.111	Ornithorhynchus_anatinus
ENSSLDG00000023487	-	94	97.110	ENSORLG00000015621	-	100	97.110	Oryzias_latipes
ENSSLDG00000023487	-	95	97.126	ENSORLG00020016276	-	100	97.126	Oryzias_latipes_hni
ENSSLDG00000023487	-	99	97.268	ENSORLG00015016270	-	100	86.938	Oryzias_latipes_hsok
ENSSLDG00000023487	-	99	97.268	ENSOMEG00000022050	-	99	97.268	Oryzias_melastigma
ENSSLDG00000023487	-	82	92.763	ENSOGAG00000027048	-	80	65.086	Otolemur_garnettii
ENSSLDG00000023487	-	77	95.070	ENSOARG00000018899	-	88	60.792	Ovis_aries
ENSSLDG00000023487	-	83	94.771	ENSPKIG00000004815	-	94	67.423	Paramormyrops_kingsleyae
ENSSLDG00000023487	-	89	89.222	ENSPKIG00000017291	-	90	63.136	Paramormyrops_kingsleyae
ENSSLDG00000023487	-	86	90.000	ENSPSIG00000016569	-	81	63.002	Pelodiscus_sinensis
ENSSLDG00000023487	-	88	94.410	ENSPMGG00000017585	-	95	98.701	Periophthalmus_magnuspinnatus
ENSSLDG00000023487	-	70	86.822	ENSPMAG00000007150	-	88	83.333	Petromyzon_marinus
ENSSLDG00000023487	-	99	94.536	ENSPFOG00000004025	-	97	94.536	Poecilia_formosa
ENSSLDG00000023487	-	100	84.402	ENSPLAG00000019842	-	100	84.829	Poecilia_latipinna
ENSSLDG00000023487	-	100	84.188	ENSPMEG00000004807	-	97	84.615	Poecilia_mexicana
ENSSLDG00000023487	-	100	94.022	ENSPREG00000015599	-	100	94.022	Poecilia_reticulata
ENSSLDG00000023487	-	83	92.810	ENSPNAG00000017484	-	95	67.409	Pygocentrus_nattereri
ENSSLDG00000023487	-	82	92.763	ENSRNOG00000020438	Prpf38b	84	63.466	Rattus_norvegicus
ENSSLDG00000023487	-	92	82.353	ENSSFOG00015004405	-	100	79.570	Scleropages_formosus
ENSSLDG00000023487	-	99	86.413	ENSSFOG00015011251	-	96	86.413	Scleropages_formosus
ENSSLDG00000023487	-	100	97.826	ENSSMAG00000001781	-	100	97.826	Scophthalmus_maximus
ENSSLDG00000023487	-	100	100.000	ENSSDUG00000016574	-	100	100.000	Seriola_dumerili
ENSSLDG00000023487	-	85	89.873	ENSSPUG00000017742	-	83	61.777	Sphenodon_punctatus
ENSSLDG00000023487	-	99	88.197	ENSTRUG00000011765	-	100	85.161	Takifugu_rubripes
ENSSLDG00000023487	-	89	95.706	ENSTNIG00000015299	-	99	72.281	Tetraodon_nigroviridis
ENSSLDG00000023487	-	82	76.159	ENSTBEG00000007504	-	88	58.562	Tupaia_belangeri
ENSSLDG00000023487	-	82	92.763	ENSTTRG00000006479	-	93	61.154	Tursiops_truncatus
ENSSLDG00000023487	-	78	69.231	ENSVPAG00000005541	-	84	55.252	Vicugna_pacos
ENSSLDG00000023487	-	83	92.810	ENSXETG00000005260	prpf38b	96	61.723	Xenopus_tropicalis
ENSSLDG00000023487	-	100	85.501	ENSXCOG00000008329	-	100	84.402	Xiphophorus_couchianus
ENSSLDG00000023487	-	100	85.288	ENSXMAG00000023831	-	100	84.188	Xiphophorus_maculatus