EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000023507 (Gene tree)
Gene ID: -
Gene Symbol: rpusd4
Alias: si:ch211-14i3.3|zgc:92006
Full Name: mitochondrial RNA pseudouridine synthase rpusd4-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 8627 bases
Position: chrPEQF01099001.1:750859-759485
Accession: 111660795
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000030514	PseudoU_synth_2	PF00849.22	3.3e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000031393	-	6078	XM_023414198	ENSSLDP00000030514	377 (aa)	XP_023269966	UPI000C6F5C37

Gene Model

Click here to download ENSSLDG00000023507's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000023507's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000023507	rpusd4	84	49.845	ENSG00000165526	RPUSD4	86	49.697	Homo_sapiens
ENSSLDG00000023507	rpusd4	100	76.166	ENSAPOG00000011024	rpusd4	97	76.166	Acanthochromis_polyacanthus
ENSSLDG00000023507	rpusd4	88	48.358	ENSAMEG00000000127	-	87	48.358	Ailuropoda_melanoleuca
ENSSLDG00000023507	rpusd4	61	50.515	ENSAMEG00000005953	-	93	50.515	Ailuropoda_melanoleuca
ENSSLDG00000023507	rpusd4	85	77.640	ENSACIG00000003533	rpusd4	95	77.640	Amphilophus_citrinellus
ENSSLDG00000023507	rpusd4	100	76.364	ENSAOCG00000015409	rpusd4	96	76.364	Amphiprion_ocellaris
ENSSLDG00000023507	rpusd4	100	76.364	ENSAPEG00000018935	rpusd4	96	76.364	Amphiprion_percula
ENSSLDG00000023507	rpusd4	100	78.701	ENSATEG00000008059	rpusd4	96	78.701	Anabas_testudineus
ENSSLDG00000023507	rpusd4	74	51.773	ENSAPLG00000013250	RPUSD4	99	51.014	Anas_platyrhynchos
ENSSLDG00000023507	rpusd4	84	50.000	ENSACAG00000000189	RPUSD4	86	50.000	Anolis_carolinensis
ENSSLDG00000023507	rpusd4	84	48.607	ENSANAG00000024050	RPUSD4	85	48.607	Aotus_nancymaae
ENSSLDG00000023507	rpusd4	100	75.389	ENSACLG00000020996	rpusd4	99	75.389	Astatotilapia_calliptera
ENSSLDG00000023507	rpusd4	89	60.526	ENSAMXG00000031479	rpusd4	96	60.526	Astyanax_mexicanus
ENSSLDG00000023507	rpusd4	96	47.439	ENSBTAG00000020900	RPUSD4	93	47.439	Bos_taurus
ENSSLDG00000023507	rpusd4	84	48.916	ENSCJAG00000042850	RPUSD4	80	48.916	Callithrix_jacchus
ENSSLDG00000023507	rpusd4	80	52.303	ENSCAFG00000010488	RPUSD4	87	49.552	Canis_familiaris
ENSSLDG00000023507	rpusd4	80	52.303	ENSCAFG00020010621	RPUSD4	87	49.552	Canis_lupus_dingo
ENSSLDG00000023507	rpusd4	85	50.000	ENSCHIG00000009975	RPUSD4	87	49.258	Capra_hircus
ENSSLDG00000023507	rpusd4	97	45.699	ENSTSYG00000008456	RPUSD4	93	45.699	Carlito_syrichta
ENSSLDG00000023507	rpusd4	64	50.413	ENSCAPG00000006040	RPUSD4	92	50.413	Cavia_aperea
ENSSLDG00000023507	rpusd4	85	51.543	ENSCPOG00000014971	RPUSD4	85	51.543	Cavia_porcellus
ENSSLDG00000023507	rpusd4	84	48.916	ENSCCAG00000027838	RPUSD4	85	48.916	Cebus_capucinus
ENSSLDG00000023507	rpusd4	97	45.699	ENSCATG00000041570	RPUSD4	93	45.699	Cercocebus_atys
ENSSLDG00000023507	rpusd4	84	51.703	ENSCLAG00000016553	RPUSD4	84	51.703	Chinchilla_lanigera
ENSSLDG00000023507	rpusd4	97	46.092	ENSCSAG00000002274	RPUSD4	93	46.092	Chlorocebus_sabaeus
ENSSLDG00000023507	rpusd4	71	49.815	ENSCHOG00000010249	RPUSD4	94	49.815	Choloepus_hoffmanni
ENSSLDG00000023507	rpusd4	76	52.249	ENSCPBG00000011175	RPUSD4	99	52.249	Chrysemys_picta_bellii
ENSSLDG00000023507	rpusd4	84	36.364	ENSCSAVG00000000872	-	63	36.364	Ciona_savignyi
ENSSLDG00000023507	rpusd4	84	48.916	ENSCANG00000039684	RPUSD4	84	48.916	Colobus_angolensis_palliatus
ENSSLDG00000023507	rpusd4	84	50.155	ENSCGRG00001024141	Rpusd4	84	50.155	Cricetulus_griseus_chok1gshd
ENSSLDG00000023507	rpusd4	84	50.155	ENSCGRG00000014415	Rpusd4	84	50.155	Cricetulus_griseus_crigri
ENSSLDG00000023507	rpusd4	51	65.625	ENSCSEG00000006462	-	85	65.625	Cynoglossus_semilaevis
ENSSLDG00000023507	rpusd4	96	69.415	ENSCVAG00000008761	rpusd4	96	69.681	Cyprinodon_variegatus
ENSSLDG00000023507	rpusd4	96	69.149	ENSCVAG00000000392	rpusd4	99	71.510	Cyprinodon_variegatus
ENSSLDG00000023507	rpusd4	88	58.754	ENSDARG00000012674	rpusd4	94	58.754	Danio_rerio
ENSSLDG00000023507	rpusd4	83	50.949	ENSDNOG00000020026	RPUSD4	82	50.949	Dasypus_novemcinctus
ENSSLDG00000023507	rpusd4	89	46.628	ENSDORG00000016717	Rpusd4	89	46.628	Dipodomys_ordii
ENSSLDG00000023507	rpusd4	83	50.949	ENSETEG00000013953	RPUSD4	84	50.949	Echinops_telfairi
ENSSLDG00000023507	rpusd4	98	47.059	ENSEASG00005022982	RPUSD4	94	47.059	Equus_asinus_asinus
ENSSLDG00000023507	rpusd4	86	50.459	ENSECAG00000000557	RPUSD4	85	50.459	Equus_caballus
ENSSLDG00000023507	rpusd4	69	55.429	ENSEEUG00000014036	RPUSD4	68	55.429	Erinaceus_europaeus
ENSSLDG00000023507	rpusd4	95	58.311	ENSELUG00000008075	rpusd4	99	58.311	Esox_lucius
ENSSLDG00000023507	rpusd4	80	50.987	ENSFCAG00000029789	RPUSD4	88	47.774	Felis_catus
ENSSLDG00000023507	rpusd4	84	48.287	ENSFALG00000005171	RPUSD4	94	48.287	Ficedula_albicollis
ENSSLDG00000023507	rpusd4	88	48.961	ENSFDAG00000014307	RPUSD4	89	48.961	Fukomys_damarensis
ENSSLDG00000023507	rpusd4	94	73.770	ENSFHEG00000004329	rpusd4	95	73.770	Fundulus_heteroclitus
ENSSLDG00000023507	rpusd4	84	64.669	ENSGMOG00000017726	rpusd4	97	63.497	Gadus_morhua
ENSSLDG00000023507	rpusd4	75	52.281	ENSGALG00000024326	RPUSD4	87	51.097	Gallus_gallus
ENSSLDG00000023507	rpusd4	100	67.347	ENSGAFG00000021559	rpusd4	99	67.347	Gambusia_affinis
ENSSLDG00000023507	rpusd4	88	79.217	ENSGACG00000001657	rpusd4	97	82.671	Gasterosteus_aculeatus
ENSSLDG00000023507	rpusd4	85	50.309	ENSGAGG00000000132	RPUSD4	89	50.309	Gopherus_agassizii
ENSSLDG00000023507	rpusd4	84	50.774	ENSGGOG00000016494	RPUSD4	86	50.606	Gorilla_gorilla
ENSSLDG00000023507	rpusd4	100	74.286	ENSHBUG00000022838	rpusd4	99	74.286	Haplochromis_burtoni
ENSSLDG00000023507	rpusd4	88	48.961	ENSHGLG00000002285	RPUSD4	88	48.961	Heterocephalus_glaber_female
ENSSLDG00000023507	rpusd4	88	48.961	ENSHGLG00100006385	RPUSD4	88	48.961	Heterocephalus_glaber_male
ENSSLDG00000023507	rpusd4	94	70.994	ENSHCOG00000006612	rpusd4	93	70.994	Hippocampus_comes
ENSSLDG00000023507	rpusd4	85	59.385	ENSIPUG00000023879	rusd4	84	59.385	Ictalurus_punctatus
ENSSLDG00000023507	rpusd4	88	49.702	ENSSTOG00000025280	RPUSD4	91	49.702	Ictidomys_tridecemlineatus
ENSSLDG00000023507	rpusd4	84	50.943	ENSJJAG00000018673	Rpusd4	85	50.943	Jaculus_jaculus
ENSSLDG00000023507	rpusd4	100	70.341	ENSKMAG00000021805	rpusd4	99	70.341	Kryptolebias_marmoratus
ENSSLDG00000023507	rpusd4	100	71.744	ENSLBEG00000020394	rpusd4	93	81.928	Labrus_bergylta
ENSSLDG00000023507	rpusd4	85	52.439	ENSLACG00000011028	RPUSD4	85	50.872	Latimeria_chalumnae
ENSSLDG00000023507	rpusd4	87	45.238	ENSLOCG00000003124	rpusd4	88	45.238	Lepisosteus_oculatus
ENSSLDG00000023507	rpusd4	86	48.632	ENSLAFG00000005211	RPUSD4	99	42.857	Loxodonta_africana
ENSSLDG00000023507	rpusd4	97	46.237	ENSMFAG00000039513	RPUSD4	93	46.237	Macaca_fascicularis
ENSSLDG00000023507	rpusd4	97	45.968	ENSMMUG00000007933	RPUSD4	93	45.968	Macaca_mulatta
ENSSLDG00000023507	rpusd4	97	46.505	ENSMNEG00000027414	RPUSD4	93	46.505	Macaca_nemestrina
ENSSLDG00000023507	rpusd4	84	48.916	ENSMLEG00000042461	RPUSD4	84	48.916	Mandrillus_leucophaeus
ENSSLDG00000023507	rpusd4	92	78.611	ENSMAMG00000023839	rpusd4	94	78.611	Mastacembelus_armatus
ENSSLDG00000023507	rpusd4	100	75.389	ENSMZEG00005011999	rpusd4	99	75.389	Maylandia_zebra
ENSSLDG00000023507	rpusd4	74	51.408	ENSMGAG00000000840	RPUSD4	96	48.589	Meleagris_gallopavo
ENSSLDG00000023507	rpusd4	89	49.555	ENSMAUG00000010280	Rpusd4	88	49.555	Mesocricetus_auratus
ENSSLDG00000023507	rpusd4	84	51.875	ENSMICG00000015979	RPUSD4	89	53.512	Microcebus_murinus
ENSSLDG00000023507	rpusd4	89	47.214	ENSMOCG00000000661	Rpusd4	89	47.214	Microtus_ochrogaster
ENSSLDG00000023507	rpusd4	82	80.707	ENSMMOG00000021731	rpusd4	93	80.707	Mola_mola
ENSSLDG00000023507	rpusd4	81	52.090	ENSMODG00000004521	RPUSD4	79	52.090	Monodelphis_domestica
ENSSLDG00000023507	rpusd4	81	84.641	ENSMALG00000005839	rpusd4	96	82.019	Monopterus_albus
ENSSLDG00000023507	rpusd4	89	48.680	MGP_CAROLIEiJ_G0031954	Rpusd4	89	48.680	Mus_caroli
ENSSLDG00000023507	rpusd4	89	48.974	ENSMUSG00000032044	Rpusd4	89	48.974	Mus_musculus
ENSSLDG00000023507	rpusd4	89	48.680	MGP_PahariEiJ_G0014819	Rpusd4	89	48.680	Mus_pahari
ENSSLDG00000023507	rpusd4	89	48.680	MGP_SPRETEiJ_G0033078	Rpusd4	89	48.680	Mus_spretus
ENSSLDG00000023507	rpusd4	89	48.387	ENSMPUG00000006608	RPUSD4	89	48.387	Mustela_putorius_furo
ENSSLDG00000023507	rpusd4	88	49.408	ENSMLUG00000017328	-	87	49.408	Myotis_lucifugus
ENSSLDG00000023507	rpusd4	68	49.225	ENSMLUG00000029348	-	99	49.225	Myotis_lucifugus
ENSSLDG00000023507	rpusd4	85	52.294	ENSNGAG00000020847	Rpusd4	85	52.294	Nannospalax_galili
ENSSLDG00000023507	rpusd4	86	81.846	ENSNBRG00000005207	rpusd4	95	81.846	Neolamprologus_brichardi
ENSSLDG00000023507	rpusd4	97	45.528	ENSNLEG00000007465	RPUSD4	93	45.528	Nomascus_leucogenys
ENSSLDG00000023507	rpusd4	84	51.250	ENSMEUG00000004370	RPUSD4	84	51.250	Notamacropus_eugenii
ENSSLDG00000023507	rpusd4	88	47.788	ENSODEG00000004577	RPUSD4	88	47.788	Octodon_degus
ENSSLDG00000023507	rpusd4	100	75.648	ENSONIG00000018879	rpusd4	99	75.648	Oreochromis_niloticus
ENSSLDG00000023507	rpusd4	77	47.987	ENSOANG00000007247	RPUSD4	94	47.987	Ornithorhynchus_anatinus
ENSSLDG00000023507	rpusd4	88	49.852	ENSOCUG00000017039	RPUSD4	88	49.852	Oryctolagus_cuniculus
ENSSLDG00000023507	rpusd4	94	67.945	ENSORLG00000002750	rpusd4	90	73.065	Oryzias_latipes
ENSSLDG00000023507	rpusd4	92	68.539	ENSORLG00020002044	rpusd4	89	68.539	Oryzias_latipes_hni
ENSSLDG00000023507	rpusd4	92	67.978	ENSORLG00015020034	rpusd4	91	66.038	Oryzias_latipes_hsok
ENSSLDG00000023507	rpusd4	95	69.565	ENSOMEG00000004861	rpusd4	91	69.565	Oryzias_melastigma
ENSSLDG00000023507	rpusd4	83	51.899	ENSOGAG00000008922	RPUSD4	87	50.448	Otolemur_garnettii
ENSSLDG00000023507	rpusd4	85	50.000	ENSOARG00000012238	RPUSD4	87	49.258	Ovis_aries
ENSSLDG00000023507	rpusd4	84	49.845	ENSPPAG00000042883	RPUSD4	80	49.697	Pan_paniscus
ENSSLDG00000023507	rpusd4	89	47.774	ENSPPRG00000003081	RPUSD4	88	47.774	Panthera_pardus
ENSSLDG00000023507	rpusd4	89	47.774	ENSPTIG00000012059	RPUSD4	86	50.987	Panthera_tigris_altaica
ENSSLDG00000023507	rpusd4	84	49.845	ENSPTRG00000004454	RPUSD4	86	49.697	Pan_troglodytes
ENSSLDG00000023507	rpusd4	97	46.237	ENSPANG00000015040	RPUSD4	93	46.237	Papio_anubis
ENSSLDG00000023507	rpusd4	97	53.600	ENSPKIG00000023986	rpusd4	96	53.600	Paramormyrops_kingsleyae
ENSSLDG00000023507	rpusd4	78	53.512	ENSPSIG00000014268	RPUSD4	93	53.512	Pelodiscus_sinensis
ENSSLDG00000023507	rpusd4	88	72.455	ENSPMGG00000002806	rpusd4	93	70.783	Periophthalmus_magnuspinnatus
ENSSLDG00000023507	rpusd4	89	42.229	ENSPEMG00000000278	Rpusd4	88	42.229	Peromyscus_maniculatus_bairdii
ENSSLDG00000023507	rpusd4	81	39.881	ENSPMAG00000008183	rpusd4	97	39.881	Petromyzon_marinus
ENSSLDG00000023507	rpusd4	84	51.562	ENSPCIG00000010212	RPUSD4	86	51.562	Phascolarctos_cinereus
ENSSLDG00000023507	rpusd4	95	69.415	ENSPFOG00000019030	rpusd4	99	69.415	Poecilia_formosa
ENSSLDG00000023507	rpusd4	100	67.939	ENSPLAG00000016848	rpusd4	99	67.939	Poecilia_latipinna
ENSSLDG00000023507	rpusd4	100	66.921	ENSPMEG00000017534	rpusd4	99	66.921	Poecilia_mexicana
ENSSLDG00000023507	rpusd4	98	67.273	ENSPREG00000005689	rpusd4	98	67.273	Poecilia_reticulata
ENSSLDG00000023507	rpusd4	84	49.226	ENSPPYG00000004043	RPUSD4	84	49.226	Pongo_abelii
ENSSLDG00000023507	rpusd4	65	52.857	ENSPCAG00000000753	RPUSD4	67	52.857	Procavia_capensis
ENSSLDG00000023507	rpusd4	88	47.904	ENSPCOG00000020694	RPUSD4	87	47.904	Propithecus_coquereli
ENSSLDG00000023507	rpusd4	83	50.943	ENSPVAG00000000988	RPUSD4	83	50.943	Pteropus_vampyrus
ENSSLDG00000023507	rpusd4	100	74.026	ENSPNYG00000009652	rpusd4	99	74.026	Pundamilia_nyererei
ENSSLDG00000023507	rpusd4	90	58.475	ENSPNAG00000012264	rpusd4	93	58.475	Pygocentrus_nattereri
ENSSLDG00000023507	rpusd4	89	50.000	ENSRNOG00000011567	Rpusd4	89	50.000	Rattus_norvegicus
ENSSLDG00000023507	rpusd4	96	45.405	ENSRBIG00000034842	RPUSD4	93	45.040	Rhinopithecus_bieti
ENSSLDG00000023507	rpusd4	96	45.405	ENSRROG00000039753	RPUSD4	93	45.040	Rhinopithecus_roxellana
ENSSLDG00000023507	rpusd4	89	47.214	ENSSBOG00000030413	RPUSD4	90	47.214	Saimiri_boliviensis_boliviensis
ENSSLDG00000023507	rpusd4	79	50.836	ENSSHAG00000008304	RPUSD4	97	50.836	Sarcophilus_harrisii
ENSSLDG00000023507	rpusd4	85	59.451	ENSSFOG00015006203	rpusd4	88	59.451	Scleropages_formosus
ENSSLDG00000023507	rpusd4	100	80.902	ENSSMAG00000020978	rpusd4	99	81.301	Scophthalmus_maximus
ENSSLDG00000023507	rpusd4	100	98.674	ENSSDUG00000013399	rpusd4	100	98.674	Seriola_dumerili
ENSSLDG00000023507	rpusd4	78	53.691	ENSSPUG00000001401	RPUSD4	98	48.315	Sphenodon_punctatus
ENSSLDG00000023507	rpusd4	99	72.846	ENSSPAG00000012163	rpusd4	98	72.846	Stegastes_partitus
ENSSLDG00000023507	rpusd4	84	49.068	ENSSSCG00000015233	RPUSD4	84	49.068	Sus_scrofa
ENSSLDG00000023507	rpusd4	79	51.505	ENSTGUG00000000773	RPUSD4	99	51.505	Taeniopygia_guttata
ENSSLDG00000023507	rpusd4	100	69.610	ENSTRUG00000012283	rpusd4	99	69.610	Takifugu_rubripes
ENSSLDG00000023507	rpusd4	97	69.786	ENSTNIG00000014676	rpusd4	96	69.786	Tetraodon_nigroviridis
ENSSLDG00000023507	rpusd4	84	49.843	ENSTTRG00000001555	RPUSD4	84	49.843	Tursiops_truncatus
ENSSLDG00000023507	rpusd4	96	46.612	ENSUMAG00000002219	RPUSD4	93	46.612	Ursus_maritimus
ENSSLDG00000023507	rpusd4	59	48.444	ENSVPAG00000001066	RPUSD4	83	48.444	Vicugna_pacos
ENSSLDG00000023507	rpusd4	80	52.303	ENSVVUG00000020101	RPUSD4	87	49.552	Vulpes_vulpes
ENSSLDG00000023507	rpusd4	100	67.857	ENSXCOG00000004676	rpusd4	99	67.857	Xiphophorus_couchianus
ENSSLDG00000023507	rpusd4	100	67.857	ENSXMAG00000023351	rpusd4	99	67.857	Xiphophorus_maculatus