EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000023661 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 5598 bases
Position: chrPEQF01099169.1:1376108-1381705
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000030743	zf-C2H2	PF00096.26	1e-51	1	10
ENSSLDP00000030743	zf-C2H2	PF00096.26	1e-51	2	10
ENSSLDP00000030743	zf-C2H2	PF00096.26	1e-51	3	10
ENSSLDP00000030743	zf-C2H2	PF00096.26	1e-51	4	10
ENSSLDP00000030743	zf-C2H2	PF00096.26	1e-51	5	10
ENSSLDP00000030743	zf-C2H2	PF00096.26	1e-51	6	10
ENSSLDP00000030743	zf-C2H2	PF00096.26	1e-51	7	10
ENSSLDP00000030743	zf-C2H2	PF00096.26	1e-51	8	10
ENSSLDP00000030743	zf-C2H2	PF00096.26	1e-51	9	10
ENSSLDP00000030743	zf-C2H2	PF00096.26	1e-51	10	10
ENSSLDP00000030743	zf-met	PF12874.7	2.7e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000031626	-	1269	-	ENSSLDP00000030743	422 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000023661's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000023661's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000023661	-	84	42.373	ENSSLDG00000013170	zbtb17	86	42.373
ENSSLDG00000023661	-	84	48.276	ENSSLDG00000000432	-	82	48.276
ENSSLDG00000023661	-	96	45.455	ENSSLDG00000017937	-	98	40.541
ENSSLDG00000023661	-	85	47.253	ENSSLDG00000021278	-	61	47.253
ENSSLDG00000023661	-	96	46.000	ENSSLDG00000006217	-	98	46.000
ENSSLDG00000023661	-	84	37.658	ENSSLDG00000000376	-	75	41.485
ENSSLDG00000023661	-	86	42.268	ENSSLDG00000020727	-	91	43.902
ENSSLDG00000023661	-	87	36.538	ENSSLDG00000011849	-	73	36.538
ENSSLDG00000023661	-	90	32.653	ENSSLDG00000018521	znf646	76	32.653
ENSSLDG00000023661	-	85	32.836	ENSSLDG00000024295	ZNF319	96	33.983
ENSSLDG00000023661	-	87	38.281	ENSSLDG00000000859	-	94	41.071
ENSSLDG00000023661	-	57	47.826	ENSSLDG00000002284	-	93	47.826
ENSSLDG00000023661	-	59	44.000	ENSSLDG00000015049	-	92	44.000
ENSSLDG00000023661	-	73	44.118	ENSSLDG00000017138	znf384l	52	30.522
ENSSLDG00000023661	-	95	44.079	ENSSLDG00000008645	-	99	44.079
ENSSLDG00000023661	-	84	51.163	ENSSLDG00000020675	-	91	51.163
ENSSLDG00000023661	-	91	45.783	ENSSLDG00000020990	-	57	45.783
ENSSLDG00000023661	-	95	44.196	ENSSLDG00000018598	-	97	41.313
ENSSLDG00000023661	-	85	43.243	ENSSLDG00000004756	-	90	43.243
ENSSLDG00000023661	-	99	33.103	ENSSLDG00000005839	-	76	33.103
ENSSLDG00000023661	-	94	40.606	ENSSLDG00000006994	-	94	38.889
ENSSLDG00000023661	-	95	43.810	ENSSLDG00000012821	znf236	74	43.810
ENSSLDG00000023661	-	94	37.458	ENSSLDG00000000457	-	81	37.458
ENSSLDG00000023661	-	96	41.096	ENSSLDG00000007756	-	94	42.056
ENSSLDG00000023661	-	84	50.388	ENSSLDG00000004098	-	96	50.388
ENSSLDG00000023661	-	84	43.919	ENSSLDG00000025265	znf526	69	37.079
ENSSLDG00000023661	-	96	39.823	ENSSLDG00000017718	zbtb48	63	36.293
ENSSLDG00000023661	-	81	48.175	ENSSLDG00000010190	-	77	48.175
ENSSLDG00000023661	-	85	42.138	ENSSLDG00000013823	gfi1b	54	42.138
ENSSLDG00000023661	-	99	42.268	ENSSLDG00000001860	-	83	42.268
ENSSLDG00000023661	-	90	42.969	ENSSLDG00000013760	-	95	42.434
ENSSLDG00000023661	-	86	34.320	ENSSLDG00000016301	-	91	34.320
ENSSLDG00000023661	-	73	46.154	ENSSLDG00000007568	-	83	46.154
ENSSLDG00000023661	-	84	47.692	ENSSLDG00000012036	-	96	47.692
ENSSLDG00000023661	-	85	38.298	ENSSLDG00000002776	-	69	38.298
ENSSLDG00000023661	-	83	39.459	ENSSLDG00000009061	-	93	39.459
ENSSLDG00000023661	-	84	43.713	ENSSLDG00000015116	-	67	43.713
ENSSLDG00000023661	-	95	44.279	ENSSLDG00000018273	-	92	44.279
ENSSLDG00000023661	-	99	41.870	ENSSLDG00000000352	-	78	41.870
ENSSLDG00000023661	-	86	39.286	ENSSLDG00000002515	-	74	39.286
ENSSLDG00000023661	-	97	35.294	ENSSLDG00000017166	scrt1b	72	35.294
ENSSLDG00000023661	-	84	43.049	ENSSLDG00000010390	-	83	45.789
ENSSLDG00000023661	-	84	44.444	ENSSLDG00000009821	-	79	44.444
ENSSLDG00000023661	-	97	38.636	ENSSLDG00000016454	-	65	38.636
ENSSLDG00000023661	-	99	41.700	ENSSLDG00000012133	-	97	41.700
ENSSLDG00000023661	-	95	33.793	ENSSLDG00000012852	snai2	69	33.793
ENSSLDG00000023661	-	86	37.054	ENSSLDG00000005670	-	95	37.054
ENSSLDG00000023661	-	97	39.405	ENSSLDG00000001850	-	63	39.405
ENSSLDG00000023661	-	80	43.038	ENSSLDG00000002756	-	96	43.038
ENSSLDG00000023661	-	95	42.633	ENSSLDG00000018493	-	89	41.776
ENSSLDG00000023661	-	95	48.571	ENSSLDG00000018033	-	69	48.571
ENSSLDG00000023661	-	84	34.498	ENSSLDG00000001787	zbtb24	83	45.977
ENSSLDG00000023661	-	85	53.333	ENSSLDG00000014465	-	80	53.333
ENSSLDG00000023661	-	89	36.681	ENSSLDG00000006288	-	92	38.618
ENSSLDG00000023661	-	84	40.625	ENSSLDG00000020432	-	85	40.625
ENSSLDG00000023661	-	82	37.500	ENSSLDG00000025359	-	54	37.500
ENSSLDG00000023661	-	86	39.888	ENSSLDG00000013353	prdm5	67	39.888
ENSSLDG00000023661	-	84	40.896	ENSSLDG00000016317	-	85	40.896
ENSSLDG00000023661	-	85	41.860	ENSSLDG00000014177	zbtb47b	70	41.860
ENSSLDG00000023661	-	84	38.073	ENSSLDG00000014436	-	77	38.073
ENSSLDG00000023661	-	84	41.379	ENSSLDG00000004005	-	66	41.379
ENSSLDG00000023661	-	86	34.457	ENSSLDG00000003269	znf710b	58	33.708
ENSSLDG00000023661	-	84	47.586	ENSSLDG00000006724	-	92	47.586
ENSSLDG00000023661	-	73	43.333	ENSSLDG00000017614	-	97	43.333
ENSSLDG00000023661	-	96	33.929	ENSSLDG00000015796	-	82	33.929
ENSSLDG00000023661	-	85	41.256	ENSSLDG00000012320	-	98	41.256
ENSSLDG00000023661	-	96	40.283	ENSSLDG00000005850	-	92	46.512
ENSSLDG00000023661	-	100	38.760	ENSSLDG00000020455	-	93	38.760
ENSSLDG00000023661	-	84	49.231	ENSSLDG00000007524	-	92	43.719
ENSSLDG00000023661	-	94	39.574	ENSSLDG00000004485	-	69	39.574
ENSSLDG00000023661	-	81	40.964	ENSSLDG00000023060	-	69	40.964
ENSSLDG00000023661	-	80	53.125	ENSSLDG00000009582	-	93	53.125
ENSSLDG00000023661	-	90	46.032	ENSSLDG00000020655	-	60	46.032
ENSSLDG00000023661	-	91	38.028	ENSSLDG00000000464	-	64	38.028
ENSSLDG00000023661	-	91	46.000	ENSSLDG00000005868	-	92	46.000
ENSSLDG00000023661	-	92	50.633	ENSSLDG00000000202	-	73	50.633
ENSSLDG00000023661	-	97	44.231	ENSSLDG00000000203	-	96	49.383

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000023661	-	80	52.941	ENSAPOG00000005767	-	100	52.941	Acanthochromis_polyacanthus
ENSSLDG00000023661	-	96	44.068	ENSAOCG00000000570	-	93	44.068	Amphiprion_ocellaris
ENSSLDG00000023661	-	96	42.688	ENSAPEG00000018796	-	90	42.688	Amphiprion_percula
ENSSLDG00000023661	-	85	37.374	ENSCVAG00000018507	-	83	35.371	Cyprinodon_variegatus
ENSSLDG00000023661	-	84	35.808	ENSFHEG00000022534	-	97	35.808	Fundulus_heteroclitus
ENSSLDG00000023661	-	95	37.615	ENSKMAG00000013745	-	61	39.286	Kryptolebias_marmoratus
ENSSLDG00000023661	-	99	41.036	ENSMAMG00000018114	-	97	42.222	Mastacembelus_armatus
ENSSLDG00000023661	-	89	37.984	ENSMAMG00000009817	-	81	46.575	Mastacembelus_armatus
ENSSLDG00000023661	-	99	45.178	ENSMZEG00005016808	-	87	45.178	Maylandia_zebra
ENSSLDG00000023661	-	84	47.024	ENSMALG00000012116	-	95	47.024	Monopterus_albus
ENSSLDG00000023661	-	84	47.368	ENSMALG00000012757	-	70	47.368	Monopterus_albus
ENSSLDG00000023661	-	95	40.254	ENSMALG00000008930	-	97	40.254	Monopterus_albus
ENSSLDG00000023661	-	86	42.105	ENSMALG00000001085	-	91	42.105	Monopterus_albus
ENSSLDG00000023661	-	82	47.531	ENSMALG00000004579	-	89	47.531	Monopterus_albus
ENSSLDG00000023661	-	95	47.590	ENSNBRG00000013501	-	96	47.590	Neolamprologus_brichardi
ENSSLDG00000023661	-	87	37.619	ENSOMEG00000021420	-	68	37.619	Oryzias_melastigma
ENSSLDG00000023661	-	86	38.162	ENSPREG00000014898	-	77	38.162	Poecilia_reticulata
ENSSLDG00000023661	-	94	46.243	ENSPNYG00000007756	-	77	42.063	Pundamilia_nyererei
ENSSLDG00000023661	-	88	41.451	ENSSDUG00000001263	-	84	41.451	Seriola_dumerili
ENSSLDG00000023661	-	85	43.216	ENSTRUG00000023925	-	51	43.216	Takifugu_rubripes
ENSSLDG00000023661	-	98	35.507	ENSTRUG00000022194	-	55	35.507	Takifugu_rubripes
ENSSLDG00000023661	-	99	40.523	ENSTRUG00000012273	-	94	40.523	Takifugu_rubripes
ENSSLDG00000023661	-	84	48.062	ENSTRUG00000022206	-	54	40.000	Takifugu_rubripes
ENSSLDG00000023661	-	98	39.855	ENSTRUG00000022919	-	75	41.704	Takifugu_rubripes
ENSSLDG00000023661	-	84	42.925	ENSTRUG00000001268	-	96	40.909	Takifugu_rubripes
ENSSLDG00000023661	-	84	53.125	ENSTRUG00000003111	-	93	53.125	Takifugu_rubripes
ENSSLDG00000023661	-	87	41.176	ENSTNIG00000005856	-	100	41.176	Tetraodon_nigroviridis
ENSSLDG00000023661	-	89	42.857	ENSXCOG00000019492	-	96	42.857	Xiphophorus_couchianus
ENSSLDG00000023661	-	84	39.370	ENSXMAG00000022297	-	99	38.652	Xiphophorus_maculatus