EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000023663 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: transcription activator BRG1-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 16280 bases
Position: chrPEQF01099070.1:311453-327732
Accession: 111664530
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000030799	ResIII	PF04851.15	1.5e-08	1	1
ENSSLDP00000030799	BRK	PF07533.16	5.8e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000031688	-	4710	XM_023419148	ENSSLDP00000030799	1569 (aa)	XP_023274916	-

Gene Model

Click here to download ENSSLDG00000023663's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000023663's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000023663	-	97	86.887	ENSSLDG00000024486	smarca4a	100	85.635
ENSSLDG00000023663	-	97	70.424	ENSSLDG00000025449	SMARCA2	90	70.145

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000023663	-	97	87.573	ENSG00000127616	SMARCA4	99	95.652	Homo_sapiens
ENSSLDG00000023663	-	99	93.958	ENSAPOG00000004542	SMARCA4	99	94.483	Acanthochromis_polyacanthus
ENSSLDG00000023663	-	75	88.898	ENSAPOG00000003509	smarca4a	93	86.493	Acanthochromis_polyacanthus
ENSSLDG00000023663	-	97	84.072	ENSAMEG00000010868	SMARCA4	96	83.177	Ailuropoda_melanoleuca
ENSSLDG00000023663	-	99	93.103	ENSACIG00000003035	-	100	93.806	Amphilophus_citrinellus
ENSSLDG00000023663	-	97	87.436	ENSACIG00000021550	smarca4a	94	86.018	Amphilophus_citrinellus
ENSSLDG00000023663	-	74	92.128	ENSAOCG00000019167	smarca4a	100	85.586	Amphiprion_ocellaris
ENSSLDG00000023663	-	96	97.543	ENSAOCG00000009450	-	97	97.543	Amphiprion_ocellaris
ENSSLDG00000023663	-	74	92.215	ENSAPEG00000015559	smarca4a	100	85.655	Amphiprion_percula
ENSSLDG00000023663	-	99	93.719	ENSAPEG00000023108	-	96	92.959	Amphiprion_percula
ENSSLDG00000023663	-	97	86.945	ENSATEG00000011524	smarca4a	95	86.422	Anabas_testudineus
ENSSLDG00000023663	-	99	92.080	ENSATEG00000001094	-	99	92.080	Anabas_testudineus
ENSSLDG00000023663	-	97	87.394	ENSANAG00000036991	SMARCA4	95	83.917	Aotus_nancymaae
ENSSLDG00000023663	-	97	88.729	ENSACLG00000000163	smarca4a	96	86.671	Astatotilapia_calliptera
ENSSLDG00000023663	-	99	93.358	ENSACLG00000008638	-	98	93.054	Astatotilapia_calliptera
ENSSLDG00000023663	-	97	85.219	ENSAMXG00000021023	smarca4a	96	84.630	Astyanax_mexicanus
ENSSLDG00000023663	-	96	90.046	ENSAMXG00000011238	-	95	89.545	Astyanax_mexicanus
ENSSLDG00000023663	-	97	87.614	ENSBTAG00000019220	SMARCA4	95	86.906	Bos_taurus
ENSSLDG00000023663	-	94	90.021	ENSCJAG00000005936	SMARCA4	89	90.486	Callithrix_jacchus
ENSSLDG00000023663	-	97	87.768	ENSCAFG00000017584	SMARCA4	95	87.362	Canis_familiaris
ENSSLDG00000023663	-	97	87.768	ENSCAFG00020024620	SMARCA4	94	87.362	Canis_lupus_dingo
ENSSLDG00000023663	-	97	83.724	ENSCHIG00000015318	SMARCA4	95	82.954	Capra_hircus
ENSSLDG00000023663	-	97	87.549	ENSTSYG00000012966	SMARCA4	95	86.971	Carlito_syrichta
ENSSLDG00000023663	-	96	81.432	ENSCAPG00000015932	SMARCA4	94	89.948	Cavia_aperea
ENSSLDG00000023663	-	97	87.948	ENSCPOG00000015549	SMARCA4	95	87.557	Cavia_porcellus
ENSSLDG00000023663	-	97	85.352	ENSCCAG00000031660	SMARCA4	93	84.886	Cebus_capucinus
ENSSLDG00000023663	-	97	87.573	ENSCATG00000029530	SMARCA4	95	87.231	Cercocebus_atys
ENSSLDG00000023663	-	97	87.663	ENSCLAG00000011946	SMARCA4	95	87.231	Chinchilla_lanigera
ENSSLDG00000023663	-	97	87.183	ENSCPBG00000009994	SMARCA4	95	87.231	Chrysemys_picta_bellii
ENSSLDG00000023663	-	97	87.573	ENSCANG00000036013	SMARCA4	95	87.231	Colobus_angolensis_palliatus
ENSSLDG00000023663	-	97	87.508	ENSCGRG00001016732	Smarca4	95	87.101	Cricetulus_griseus_chok1gshd
ENSSLDG00000023663	-	97	87.508	ENSCGRG00000017242	Smarca4	95	87.101	Cricetulus_griseus_crigri
ENSSLDG00000023663	-	97	86.249	ENSCVAG00000006979	smarca4a	95	86.231	Cyprinodon_variegatus
ENSSLDG00000023663	-	96	96.213	ENSCVAG00000003018	-	96	96.210	Cyprinodon_variegatus
ENSSLDG00000023663	-	97	87.956	ENSDARG00000077226	smarca4a	95	86.486	Danio_rerio
ENSSLDG00000023663	-	93	86.258	ENSDARG00000104339	SMARCA4	95	85.686	Danio_rerio
ENSSLDG00000023663	-	79	84.540	ENSDNOG00000048847	SMARCA4	90	90.683	Dasypus_novemcinctus
ENSSLDG00000023663	-	87	81.871	ENSDORG00000002544	Smarca4	91	82.106	Dipodomys_ordii
ENSSLDG00000023663	-	96	76.018	ENSETEG00000013361	SMARCA4	94	74.903	Echinops_telfairi
ENSSLDG00000023663	-	97	87.508	ENSEASG00005006167	SMARCA4	93	87.101	Equus_asinus_asinus
ENSSLDG00000023663	-	97	87.573	ENSECAG00000008334	SMARCA4	95	87.166	Equus_caballus
ENSSLDG00000023663	-	97	86.207	ENSELUG00000010247	smarca4a	95	84.167	Esox_lucius
ENSSLDG00000023663	-	97	82.908	ENSELUG00000023232	-	90	81.707	Esox_lucius
ENSSLDG00000023663	-	97	87.662	ENSFCAG00000004894	SMARCA4	95	87.256	Felis_catus
ENSSLDG00000023663	-	76	91.206	ENSFALG00000004208	SMARCA4	95	84.535	Ficedula_albicollis
ENSSLDG00000023663	-	93	87.517	ENSFDAG00000012237	SMARCA4	97	87.045	Fukomys_damarensis
ENSSLDG00000023663	-	93	85.496	ENSFHEG00000010182	smarca4a	95	85.449	Fundulus_heteroclitus
ENSSLDG00000023663	-	99	93.738	ENSFHEG00000007902	-	96	93.738	Fundulus_heteroclitus
ENSSLDG00000023663	-	90	83.740	ENSGMOG00000002649	smarca4a	88	85.039	Gadus_morhua
ENSSLDG00000023663	-	88	86.799	ENSGMOG00000005756	-	87	85.831	Gadus_morhua
ENSSLDG00000023663	-	74	86.294	ENSGALG00000047145	SMARCA4	100	85.847	Gallus_gallus
ENSSLDG00000023663	-	87	89.059	ENSGAFG00000014900	smarca4a	92	88.897	Gambusia_affinis
ENSSLDG00000023663	-	97	90.013	ENSGAFG00000008827	-	94	89.079	Gambusia_affinis
ENSSLDG00000023663	-	97	89.454	ENSGACG00000016033	-	96	88.391	Gasterosteus_aculeatus
ENSSLDG00000023663	-	93	85.628	ENSGACG00000006691	smarca4a	95	84.160	Gasterosteus_aculeatus
ENSSLDG00000023663	-	97	87.419	ENSGAGG00000016757	SMARCA4	95	87.467	Gopherus_agassizii
ENSSLDG00000023663	-	97	87.573	ENSGGOG00000009882	SMARCA4	95	87.231	Gorilla_gorilla
ENSSLDG00000023663	-	99	94.448	ENSHBUG00000005447	-	99	93.610	Haplochromis_burtoni
ENSSLDG00000023663	-	97	88.794	ENSHBUG00000021172	smarca4a	95	86.920	Haplochromis_burtoni
ENSSLDG00000023663	-	97	87.176	ENSHGLG00000010519	SMARCA4	95	86.852	Heterocephalus_glaber_female
ENSSLDG00000023663	-	97	87.313	ENSHGLG00100013774	SMARCA4	95	86.866	Heterocephalus_glaber_male
ENSSLDG00000023663	-	97	87.057	ENSIPUG00000006107	smarca4a	97	85.079	Ictalurus_punctatus
ENSSLDG00000023663	-	95	89.169	ENSIPUG00000016346	-	92	88.612	Ictalurus_punctatus
ENSSLDG00000023663	-	97	87.703	ENSSTOG00000007939	SMARCA4	95	87.296	Ictidomys_tridecemlineatus
ENSSLDG00000023663	-	97	85.732	ENSJJAG00000012877	Smarca4	95	84.949	Jaculus_jaculus
ENSSLDG00000023663	-	97	87.549	ENSKMAG00000011931	smarca4a	95	87.525	Kryptolebias_marmoratus
ENSSLDG00000023663	-	99	95.935	ENSKMAG00000019518	-	99	95.935	Kryptolebias_marmoratus
ENSSLDG00000023663	-	99	85.221	ENSLBEG00000017383	smarca4a	97	83.896	Labrus_bergylta
ENSSLDG00000023663	-	93	92.509	ENSLBEG00000020655	-	94	93.606	Labrus_bergylta
ENSSLDG00000023663	-	52	81.437	ENSLACG00000015309	SMARCA4	100	80.792	Latimeria_chalumnae
ENSSLDG00000023663	-	97	85.212	ENSLOCG00000007820	smarca4a	95	83.398	Lepisosteus_oculatus
ENSSLDG00000023663	-	97	87.597	ENSLAFG00000001433	SMARCA4	95	87.191	Loxodonta_africana
ENSSLDG00000023663	-	97	87.573	ENSMFAG00000032146	SMARCA4	94	87.296	Macaca_fascicularis
ENSSLDG00000023663	-	97	87.573	ENSMMUG00000012042	SMARCA4	95	87.231	Macaca_mulatta
ENSSLDG00000023663	-	97	87.638	ENSMNEG00000028512	SMARCA4	95	87.280	Macaca_nemestrina
ENSSLDG00000023663	-	97	87.508	ENSMLEG00000034976	SMARCA4	95	86.996	Mandrillus_leucophaeus
ENSSLDG00000023663	-	97	88.278	ENSMAMG00000009256	smarca4a	94	87.861	Mastacembelus_armatus
ENSSLDG00000023663	-	98	97.605	ENSMAMG00000002841	-	99	97.605	Mastacembelus_armatus
ENSSLDG00000023663	-	97	88.721	ENSMZEG00005003889	smarca4a	94	88.721	Maylandia_zebra
ENSSLDG00000023663	-	96	97.209	ENSMZEG00005023861	-	94	97.209	Maylandia_zebra
ENSSLDG00000023663	-	97	87.403	ENSMAUG00000020731	Smarca4	95	86.996	Mesocricetus_auratus
ENSSLDG00000023663	-	97	87.597	ENSMICG00000009806	SMARCA4	95	87.191	Microcebus_murinus
ENSSLDG00000023663	-	97	87.078	ENSMOCG00000022209	Smarca4	95	86.801	Microtus_ochrogaster
ENSSLDG00000023663	-	99	90.498	ENSMMOG00000008466	-	96	90.756	Mola_mola
ENSSLDG00000023663	-	97	86.097	ENSMODG00000006287	SMARCA4	95	85.377	Monodelphis_domestica
ENSSLDG00000023663	-	91	91.916	ENSMALG00000021534	-	99	92.538	Monopterus_albus
ENSSLDG00000023663	-	93	88.451	ENSMALG00000003388	smarca4a	94	88.154	Monopterus_albus
ENSSLDG00000023663	-	97	87.378	MGP_CAROLIEiJ_G0031879	Smarca4	100	85.906	Mus_caroli
ENSSLDG00000023663	-	97	87.378	ENSMUSG00000032187	Smarca4	99	85.906	Mus_musculus
ENSSLDG00000023663	-	97	87.288	MGP_PahariEiJ_G0014745	Smarca4	100	85.176	Mus_pahari
ENSSLDG00000023663	-	97	87.378	MGP_SPRETEiJ_G0033003	Smarca4	100	85.906	Mus_spretus
ENSSLDG00000023663	-	97	87.703	ENSMPUG00000005711	SMARCA4	95	87.296	Mustela_putorius_furo
ENSSLDG00000023663	-	97	87.768	ENSMLUG00000004491	-	95	87.427	Myotis_lucifugus
ENSSLDG00000023663	-	97	87.492	ENSNGAG00000021852	Smarca4	95	86.775	Nannospalax_galili
ENSSLDG00000023663	-	97	86.292	ENSNBRG00000011457	smarca4a	96	85.919	Neolamprologus_brichardi
ENSSLDG00000023663	-	91	93.937	ENSNBRG00000018865	-	99	94.077	Neolamprologus_brichardi
ENSSLDG00000023663	-	97	83.766	ENSNLEG00000012389	SMARCA4	94	83.583	Nomascus_leucogenys
ENSSLDG00000023663	-	78	89.655	ENSOPRG00000000885	-	76	89.655	Ochotona_princeps
ENSSLDG00000023663	-	97	86.028	ENSODEG00000017127	SMARCA4	95	84.278	Octodon_degus
ENSSLDG00000023663	-	97	88.954	ENSONIG00000008196	smarca4a	95	88.555	Oreochromis_niloticus
ENSSLDG00000023663	-	99	94.635	ENSONIG00000018040	-	95	92.957	Oreochromis_niloticus
ENSSLDG00000023663	-	97	82.326	ENSOCUG00000001787	SMARCA4	95	81.457	Oryctolagus_cuniculus
ENSSLDG00000023663	-	86	97.200	ENSORLG00000003955	-	98	87.953	Oryzias_latipes
ENSSLDG00000023663	-	93	86.412	ENSORLG00000015452	smarca4a	95	86.619	Oryzias_latipes
ENSSLDG00000023663	-	93	90.826	ENSORLG00020009728	-	98	88.309	Oryzias_latipes_hni
ENSSLDG00000023663	-	93	86.212	ENSORLG00020004611	smarca4a	99	84.042	Oryzias_latipes_hni
ENSSLDG00000023663	-	93	86.212	ENSORLG00015016560	smarca4a	98	85.884	Oryzias_latipes_hsok
ENSSLDG00000023663	-	97	90.443	ENSORLG00015007739	-	95	90.633	Oryzias_latipes_hsok
ENSSLDG00000023663	-	97	86.693	ENSOMEG00000007486	smarca4a	95	86.723	Oryzias_melastigma
ENSSLDG00000023663	-	91	85.843	ENSOGAG00000016148	SMARCA4	100	84.897	Otolemur_garnettii
ENSSLDG00000023663	-	97	87.231	ENSOARG00000017454	SMARCA4	92	86.933	Ovis_aries
ENSSLDG00000023663	-	97	87.573	ENSPPAG00000043191	SMARCA4	95	87.231	Pan_paniscus
ENSSLDG00000023663	-	97	87.662	ENSPPRG00000000064	SMARCA4	95	87.256	Panthera_pardus
ENSSLDG00000023663	-	77	87.570	ENSPTIG00000017447	SMARCA4	95	81.795	Panthera_tigris_altaica
ENSSLDG00000023663	-	97	87.573	ENSPTRG00000010488	SMARCA4	95	87.231	Pan_troglodytes
ENSSLDG00000023663	-	97	87.703	ENSPANG00000011042	SMARCA4	94	87.345	Papio_anubis
ENSSLDG00000023663	-	93	89.191	ENSPKIG00000010087	-	92	87.795	Paramormyrops_kingsleyae
ENSSLDG00000023663	-	97	88.504	ENSPKIG00000007770	SMARCA4	95	87.379	Paramormyrops_kingsleyae
ENSSLDG00000023663	-	97	76.760	ENSPSIG00000005547	SMARCA4	95	80.584	Pelodiscus_sinensis
ENSSLDG00000023663	-	97	87.273	ENSPEMG00000020389	Smarca4	95	86.866	Peromyscus_maniculatus_bairdii
ENSSLDG00000023663	-	97	87.826	ENSPCIG00000017138	SMARCA4	95	87.679	Phascolarctos_cinereus
ENSSLDG00000023663	-	97	85.349	ENSPFOG00000007892	smarca4a	95	85.613	Poecilia_formosa
ENSSLDG00000023663	-	99	92.986	ENSPFOG00000012930	-	95	91.299	Poecilia_formosa
ENSSLDG00000023663	-	97	85.541	ENSPLAG00000014294	smarca4a	95	85.806	Poecilia_latipinna
ENSSLDG00000023663	-	99	95.624	ENSPLAG00000018616	-	96	95.624	Poecilia_latipinna
ENSSLDG00000023663	-	99	93.613	ENSPMEG00000008929	-	96	93.613	Poecilia_mexicana
ENSSLDG00000023663	-	97	85.413	ENSPMEG00000003725	smarca4a	96	85.613	Poecilia_mexicana
ENSSLDG00000023663	-	97	84.686	ENSPREG00000014608	smarca4a	96	84.987	Poecilia_reticulata
ENSSLDG00000023663	-	99	91.519	ENSPREG00000014823	-	96	90.915	Poecilia_reticulata
ENSSLDG00000023663	-	97	85.732	ENSPPYG00000009568	SMARCA4	95	84.650	Pongo_abelii
ENSSLDG00000023663	-	77	90.110	ENSPCAG00000014054	SMARCA4	73	89.888	Procavia_capensis
ENSSLDG00000023663	-	97	87.638	ENSPCOG00000023011	SMARCA4	95	87.061	Propithecus_coquereli
ENSSLDG00000023663	-	92	82.109	ENSPVAG00000007787	SMARCA4	90	81.733	Pteropus_vampyrus
ENSSLDG00000023663	-	99	93.722	ENSPNYG00000023995	-	99	93.850	Pundamilia_nyererei
ENSSLDG00000023663	-	97	87.637	ENSPNYG00000000717	smarca4a	96	86.727	Pundamilia_nyererei
ENSSLDG00000023663	-	97	90.181	ENSPNAG00000006636	-	93	89.933	Pygocentrus_nattereri
ENSSLDG00000023663	-	97	87.443	ENSRNOG00000009271	Smarca4	95	87.036	Rattus_norvegicus
ENSSLDG00000023663	-	97	87.508	ENSRBIG00000038696	SMARCA4	94	87.231	Rhinopithecus_bieti
ENSSLDG00000023663	-	97	87.573	ENSRROG00000045509	SMARCA4	95	87.231	Rhinopithecus_roxellana
ENSSLDG00000023663	-	97	87.573	ENSSBOG00000026896	SMARCA4	95	87.296	Saimiri_boliviensis_boliviensis
ENSSLDG00000023663	-	97	87.500	ENSSHAG00000001642	SMARCA4	95	87.484	Sarcophilus_harrisii
ENSSLDG00000023663	-	97	88.171	ENSSFOG00015013823	smarca4	95	87.001	Scleropages_formosus
ENSSLDG00000023663	-	88	92.823	ENSSFOG00015009921	-	88	92.132	Scleropages_formosus
ENSSLDG00000023663	-	97	87.877	ENSSMAG00000003200	smarca4a	93	87.402	Scophthalmus_maximus
ENSSLDG00000023663	-	97	90.145	ENSSMAG00000014082	-	96	89.241	Scophthalmus_maximus
ENSSLDG00000023663	-	99	98.340	ENSSDUG00000005388	-	99	93.878	Seriola_dumerili
ENSSLDG00000023663	-	97	84.255	ENSSDUG00000017298	smarca4a	95	84.094	Seriola_dumerili
ENSSLDG00000023663	-	60	97.516	ENSSARG00000013477	SMARCA4	77	97.516	Sorex_araneus
ENSSLDG00000023663	-	97	83.194	ENSSPUG00000004558	SMARCA4	98	83.463	Sphenodon_punctatus
ENSSLDG00000023663	-	99	94.034	ENSSPAG00000012533	-	95	93.783	Stegastes_partitus
ENSSLDG00000023663	-	97	86.251	ENSSPAG00000004248	smarca4a	95	85.640	Stegastes_partitus
ENSSLDG00000023663	-	97	87.727	ENSSSCG00000013629	SMARCA4	95	87.321	Sus_scrofa
ENSSLDG00000023663	-	54	84.770	ENSTGUG00000015488	-	98	84.542	Taeniopygia_guttata
ENSSLDG00000023663	-	91	81.327	ENSTRUG00000004885	smarca4a	100	81.570	Takifugu_rubripes
ENSSLDG00000023663	-	99	91.343	ENSTRUG00000001378	SMARCA4	99	90.527	Takifugu_rubripes
ENSSLDG00000023663	-	98	92.184	ENSTNIG00000004536	SMARCA4	95	93.523	Tetraodon_nigroviridis
ENSSLDG00000023663	-	74	84.546	ENSTNIG00000004859	-	100	84.452	Tetraodon_nigroviridis
ENSSLDG00000023663	-	97	84.949	ENSTTRG00000009519	SMARCA4	95	84.419	Tursiops_truncatus
ENSSLDG00000023663	-	97	87.768	ENSUAMG00000014661	SMARCA4	95	87.362	Ursus_americanus
ENSSLDG00000023663	-	97	81.976	ENSUMAG00000022005	SMARCA4	95	90.945	Ursus_maritimus
ENSSLDG00000023663	-	97	87.768	ENSVVUG00000017820	SMARCA4	92	87.362	Vulpes_vulpes
ENSSLDG00000023663	-	98	81.408	ENSXETG00000009355	smarca4	99	83.465	Xenopus_tropicalis
ENSSLDG00000023663	-	99	91.338	ENSXCOG00000013494	-	96	91.467	Xiphophorus_couchianus
ENSSLDG00000023663	-	97	85.972	ENSXMAG00000006321	smarca4a	100	84.003	Xiphophorus_maculatus
ENSSLDG00000023663	-	99	93.321	ENSXMAG00000007030	-	96	92.899	Xiphophorus_maculatus