EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000023761 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-37o8.1
Alias: fi12b10|wu:fi12b10
Full Name: elongation factor 1-alpha-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 1955 bases
Position: chrPEQF01098839.1:591532-593486
Accession: 111656572
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000030872	GTP_EFTU	PF00009.27	6.5e-55	1	1
ENSSLDP00000030872	MMR_HSR1	PF01926.23	8.4e-08	1	1
ENSSLDP00000030872	GTP_EFTU_D2	PF03144.25	2.7e-12	1	1
ENSSLDP00000030872	GTP_EFTU_D3	PF03143.17	1.5e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000031761	-	1374	XM_023408312	ENSSLDP00000030872	457 (aa)	XP_023264080	UPI000C6F6101

Gene Model

Click here to download ENSSLDG00000023761's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000023761's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000023761	si:dkey-37o8.1	97	72.235	ENSSLDG00000006378	eef1a1b	96	72.235
ENSSLDG00000023761	si:dkey-37o8.1	97	72.009	ENSSLDG00000017189	EEF1A1	96	72.009
ENSSLDG00000023761	si:dkey-37o8.1	95	37.900	ENSSLDG00000004960	hbs1l	69	37.900
ENSSLDG00000023761	si:dkey-37o8.1	96	30.872	ENSSLDG00000006494	tufm	88	30.872
ENSSLDG00000023761	si:dkey-37o8.1	95	36.927	ENSSLDG00000008363	GSPT1	72	36.674
ENSSLDG00000023761	si:dkey-37o8.1	95	37.011	ENSSLDG00000009000	gspt1l	75	37.011
ENSSLDG00000023761	si:dkey-37o8.1	100	71.335	ENSSLDG00000019156	-	98	71.335

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000023761	si:dkey-37o8.1	100	92.341	ENSAPOG00000016459	si:dkey-37o8.1	100	92.341	Acanthochromis_polyacanthus
ENSSLDG00000023761	si:dkey-37o8.1	96	91.076	ENSACIG00000020985	si:dkey-37o8.1	82	91.076	Amphilophus_citrinellus
ENSSLDG00000023761	si:dkey-37o8.1	100	94.092	ENSAOCG00000002663	si:dkey-37o8.1	100	94.092	Amphiprion_ocellaris
ENSSLDG00000023761	si:dkey-37o8.1	100	93.873	ENSAPEG00000012670	si:dkey-37o8.1	100	93.873	Amphiprion_percula
ENSSLDG00000023761	si:dkey-37o8.1	92	95.261	ENSATEG00000002217	si:dkey-37o8.1	99	95.261	Anabas_testudineus
ENSSLDG00000023761	si:dkey-37o8.1	100	91.685	ENSACLG00000003519	si:dkey-37o8.1	100	91.685	Astatotilapia_calliptera
ENSSLDG00000023761	si:dkey-37o8.1	100	85.590	ENSAMXG00000002728	si:dkey-37o8.1	100	85.590	Astyanax_mexicanus
ENSSLDG00000023761	si:dkey-37o8.1	96	74.715	ENSCPBG00000020570	-	87	74.715	Chrysemys_picta_bellii
ENSSLDG00000023761	si:dkey-37o8.1	100	87.146	ENSCSEG00000019807	si:dkey-37o8.1	100	86.422	Cynoglossus_semilaevis
ENSSLDG00000023761	si:dkey-37o8.1	99	90.088	ENSCVAG00000009828	si:dkey-37o8.1	99	90.088	Cyprinodon_variegatus
ENSSLDG00000023761	si:dkey-37o8.1	100	81.878	ENSDARG00000071727	si:dkey-37o8.1	95	81.878	Danio_rerio
ENSSLDG00000023761	si:dkey-37o8.1	98	85.268	ENSELUG00000007495	si:dkey-37o8.1	98	85.268	Esox_lucius
ENSSLDG00000023761	si:dkey-37o8.1	100	90.153	ENSFHEG00000017452	si:dkey-37o8.1	100	90.153	Fundulus_heteroclitus
ENSSLDG00000023761	si:dkey-37o8.1	99	81.938	ENSGMOG00000006122	si:dkey-37o8.1	100	81.938	Gadus_morhua
ENSSLDG00000023761	si:dkey-37o8.1	98	84.667	ENSGAFG00000000367	si:dkey-37o8.1	100	84.667	Gambusia_affinis
ENSSLDG00000023761	si:dkey-37o8.1	100	91.247	ENSGACG00000004505	si:dkey-37o8.1	100	91.247	Gasterosteus_aculeatus
ENSSLDG00000023761	si:dkey-37o8.1	96	75.171	ENSGAGG00000007724	-	93	77.885	Gopherus_agassizii
ENSSLDG00000023761	si:dkey-37o8.1	100	91.466	ENSHBUG00000015515	si:dkey-37o8.1	100	91.466	Haplochromis_burtoni
ENSSLDG00000023761	si:dkey-37o8.1	98	81.292	ENSHCOG00000001215	si:dkey-37o8.1	99	81.292	Hippocampus_comes
ENSSLDG00000023761	si:dkey-37o8.1	100	83.188	ENSIPUG00000004067	si:dkey-37o8.1	100	83.188	Ictalurus_punctatus
ENSSLDG00000023761	si:dkey-37o8.1	100	89.934	ENSKMAG00000015910	si:dkey-37o8.1	100	89.934	Kryptolebias_marmoratus
ENSSLDG00000023761	si:dkey-37o8.1	100	94.092	ENSLBEG00000021334	si:dkey-37o8.1	90	94.092	Labrus_bergylta
ENSSLDG00000023761	si:dkey-37o8.1	97	77.878	ENSLACG00000003948	si:dkey-37o8.1	96	77.878	Latimeria_chalumnae
ENSSLDG00000023761	si:dkey-37o8.1	98	82.103	ENSLOCG00000011245	si:dkey-37o8.1	97	82.103	Lepisosteus_oculatus
ENSSLDG00000023761	si:dkey-37o8.1	97	77.427	ENSMAMG00000009907	si:dkey-37o8.1	93	77.427	Mastacembelus_armatus
ENSSLDG00000023761	si:dkey-37o8.1	100	91.685	ENSMZEG00005018358	si:dkey-37o8.1	100	91.685	Maylandia_zebra
ENSSLDG00000023761	si:dkey-37o8.1	98	92.873	ENSMMOG00000004111	si:dkey-37o8.1	98	92.873	Mola_mola
ENSSLDG00000023761	si:dkey-37o8.1	96	83.105	ENSMALG00000017152	si:dkey-37o8.1	99	83.105	Monopterus_albus
ENSSLDG00000023761	si:dkey-37o8.1	100	91.685	ENSNBRG00000013552	si:dkey-37o8.1	100	91.685	Neolamprologus_brichardi
ENSSLDG00000023761	si:dkey-37o8.1	100	91.466	ENSONIG00000006165	si:dkey-37o8.1	100	91.466	Oreochromis_niloticus
ENSSLDG00000023761	si:dkey-37o8.1	100	91.247	ENSORLG00000019066	si:dkey-37o8.1	100	91.247	Oryzias_latipes
ENSSLDG00000023761	si:dkey-37o8.1	100	91.247	ENSORLG00020008094	si:dkey-37o8.1	100	91.247	Oryzias_latipes_hni
ENSSLDG00000023761	si:dkey-37o8.1	100	91.028	ENSORLG00015008410	si:dkey-37o8.1	100	91.028	Oryzias_latipes_hsok
ENSSLDG00000023761	si:dkey-37o8.1	98	92.188	ENSOMEG00000001868	si:dkey-37o8.1	98	92.188	Oryzias_melastigma
ENSSLDG00000023761	si:dkey-37o8.1	100	82.571	ENSPKIG00000017246	si:dkey-37o8.1	100	82.571	Paramormyrops_kingsleyae
ENSSLDG00000023761	si:dkey-37o8.1	58	68.519	ENSPSIG00000008080	-	95	68.519	Pelodiscus_sinensis
ENSSLDG00000023761	si:dkey-37o8.1	100	90.153	ENSPFOG00000013173	si:dkey-37o8.1	100	90.153	Poecilia_formosa
ENSSLDG00000023761	si:dkey-37o8.1	100	89.059	ENSPLAG00000010405	si:dkey-37o8.1	100	89.059	Poecilia_latipinna
ENSSLDG00000023761	si:dkey-37o8.1	100	90.591	ENSPMEG00000015233	si:dkey-37o8.1	100	90.591	Poecilia_mexicana
ENSSLDG00000023761	si:dkey-37o8.1	99	90.308	ENSPREG00000006280	si:dkey-37o8.1	100	90.308	Poecilia_reticulata
ENSSLDG00000023761	si:dkey-37o8.1	100	91.466	ENSPNYG00000002059	si:dkey-37o8.1	100	91.466	Pundamilia_nyererei
ENSSLDG00000023761	si:dkey-37o8.1	100	84.279	ENSPNAG00000009990	si:dkey-37o8.1	100	84.279	Pygocentrus_nattereri
ENSSLDG00000023761	si:dkey-37o8.1	97	83.070	ENSSFOG00015019070	si:dkey-37o8.1	97	83.070	Scleropages_formosus
ENSSLDG00000023761	si:dkey-37o8.1	100	95.624	ENSSMAG00000016143	si:dkey-37o8.1	100	95.624	Scophthalmus_maximus
ENSSLDG00000023761	si:dkey-37o8.1	100	99.781	ENSSDUG00000009163	si:dkey-37o8.1	100	99.781	Seriola_dumerili
ENSSLDG00000023761	si:dkey-37o8.1	99	70.861	ENSSPUG00000007467	-	99	70.861	Sphenodon_punctatus
ENSSLDG00000023761	si:dkey-37o8.1	100	93.654	ENSSPAG00000013856	si:dkey-37o8.1	100	93.654	Stegastes_partitus
ENSSLDG00000023761	si:dkey-37o8.1	99	92.952	ENSTRUG00000009006	si:dkey-37o8.1	100	92.952	Takifugu_rubripes
ENSSLDG00000023761	si:dkey-37o8.1	99	91.667	ENSTNIG00000017138	si:dkey-37o8.1	98	91.667	Tetraodon_nigroviridis
ENSSLDG00000023761	si:dkey-37o8.1	96	78.360	ENSXETG00000017744	42Sp50	97	76.718	Xenopus_tropicalis
ENSSLDG00000023761	si:dkey-37o8.1	99	90.529	ENSXCOG00000012296	si:dkey-37o8.1	100	93.407	Xiphophorus_couchianus
ENSSLDG00000023761	si:dkey-37o8.1	100	90.810	ENSXMAG00000001998	si:dkey-37o8.1	100	90.810	Xiphophorus_maculatus