EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000023989 (Gene tree)
Gene ID: -
Gene Symbol: prpf18
Alias: zgc:91830
Full Name: pre-mRNA processing factor 18
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 7225 bases
Position: chrPEQF01099352.1:105112-112336
Accession: 111671258
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000031242	PRP4	PF08799.11	2.7e-13	1	1
ENSSLDP00000031227	PRP4	PF08799.11	2.8e-13	1	1
ENSSLDP00000031242	Prp18	PF02840.15	4.7e-62	1	1
ENSSLDP00000031227	Prp18	PF02840.15	4.8e-62	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000032135	-	2304	XM_023428343	ENSSLDP00000031242	341 (aa)	XP_023284111	UPI000C6F906B
ENSSLDT00000032120	-	2331	XM_023428342	ENSSLDP00000031227	350 (aa)	XP_023284110	UPI000C6FB9A7

Gene Model

Click here to download ENSSLDG00000023989's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000023989's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000023989	prpf18	100	85.380	ENSG00000165630	PRPF18	100	85.380	Homo_sapiens
ENSSLDG00000023989	prpf18	100	98.000	ENSAPOG00000024177	prpf18	100	98.000	Acanthochromis_polyacanthus
ENSSLDG00000023989	prpf18	100	84.795	ENSAMEG00000013591	-	100	84.795	Ailuropoda_melanoleuca
ENSSLDG00000023989	prpf18	100	95.894	ENSACIG00000001186	prpf18	100	95.894	Amphilophus_citrinellus
ENSSLDG00000023989	prpf18	98	97.605	ENSAOCG00000006572	prpf18	94	97.368	Amphiprion_ocellaris
ENSSLDG00000023989	prpf18	100	97.654	ENSAPEG00000004564	prpf18	100	97.654	Amphiprion_percula
ENSSLDG00000023989	prpf18	100	97.361	ENSATEG00000000303	prpf18	100	97.361	Anabas_testudineus
ENSSLDG00000023989	prpf18	99	82.353	ENSAPLG00000003387	-	99	82.353	Anas_platyrhynchos
ENSSLDG00000023989	prpf18	100	84.302	ENSACAG00000000818	-	100	84.302	Anolis_carolinensis
ENSSLDG00000023989	prpf18	100	85.088	ENSANAG00000037445	-	100	85.088	Aotus_nancymaae
ENSSLDG00000023989	prpf18	100	95.015	ENSACLG00000026296	prpf18	100	95.015	Astatotilapia_calliptera
ENSSLDG00000023989	prpf18	100	90.571	ENSAMXG00000012848	prpf18	100	90.571	Astyanax_mexicanus
ENSSLDG00000023989	prpf18	100	84.503	ENSBTAG00000017244	PRPF18	100	84.503	Bos_taurus
ENSSLDG00000023989	prpf18	98	40.517	WBGene00009320	F32B6.3	97	40.115	Caenorhabditis_elegans
ENSSLDG00000023989	prpf18	100	85.088	ENSCJAG00000009432	-	100	85.088	Callithrix_jacchus
ENSSLDG00000023989	prpf18	100	84.795	ENSCAFG00000004735	-	100	84.795	Canis_familiaris
ENSSLDG00000023989	prpf18	100	84.795	ENSCAFG00020007712	-	100	84.795	Canis_lupus_dingo
ENSSLDG00000023989	prpf18	100	84.503	ENSCHIG00000000499	-	100	84.503	Capra_hircus
ENSSLDG00000023989	prpf18	100	84.795	ENSTSYG00000003517	-	100	84.795	Carlito_syrichta
ENSSLDG00000023989	prpf18	100	85.380	ENSCPOG00000021069	-	100	85.380	Cavia_porcellus
ENSSLDG00000023989	prpf18	100	85.088	ENSCCAG00000036822	-	100	85.088	Cebus_capucinus
ENSSLDG00000023989	prpf18	100	74.561	ENSCATG00000016633	-	100	74.561	Cercocebus_atys
ENSSLDG00000023989	prpf18	100	84.795	ENSCLAG00000011770	-	100	84.795	Chinchilla_lanigera
ENSSLDG00000023989	prpf18	100	83.761	ENSCSAG00000013109	-	100	83.761	Chlorocebus_sabaeus
ENSSLDG00000023989	prpf18	100	80.337	ENSCPBG00000003100	-	100	81.180	Chrysemys_picta_bellii
ENSSLDG00000023989	prpf18	99	56.560	ENSCING00000020481	-	97	56.560	Ciona_intestinalis
ENSSLDG00000023989	prpf18	99	56.105	ENSCSAVG00000010546	-	99	55.394	Ciona_savignyi
ENSSLDG00000023989	prpf18	100	85.380	ENSCANG00000034900	-	100	85.380	Colobus_angolensis_palliatus
ENSSLDG00000023989	prpf18	100	84.795	ENSCGRG00001023665	Prpf18	100	84.795	Cricetulus_griseus_chok1gshd
ENSSLDG00000023989	prpf18	100	84.795	ENSCGRG00000014690	Prpf18	100	84.795	Cricetulus_griseus_crigri
ENSSLDG00000023989	prpf18	100	93.255	ENSCSEG00000005536	prpf18	99	93.255	Cynoglossus_semilaevis
ENSSLDG00000023989	prpf18	100	93.842	ENSCVAG00000012401	prpf18	100	93.842	Cyprinodon_variegatus
ENSSLDG00000023989	prpf18	100	91.228	ENSDARG00000058306	prpf18	100	91.228	Danio_rerio
ENSSLDG00000023989	prpf18	100	85.088	ENSDNOG00000035607	-	100	85.088	Dasypus_novemcinctus
ENSSLDG00000023989	prpf18	100	84.503	ENSDORG00000000858	Prpf18	100	84.503	Dipodomys_ordii
ENSSLDG00000023989	prpf18	99	52.663	FBgn0027784	Prp18	98	51.775	Drosophila_melanogaster
ENSSLDG00000023989	prpf18	100	76.608	ENSETEG00000015060	-	100	76.608	Echinops_telfairi
ENSSLDG00000023989	prpf18	100	69.452	ENSEBUG00000016502	prpf18	99	68.588	Eptatretus_burgeri
ENSSLDG00000023989	prpf18	100	85.088	ENSEASG00005019373	-	100	85.088	Equus_asinus_asinus
ENSSLDG00000023989	prpf18	100	85.088	ENSECAG00000006997	PRPF18	100	85.088	Equus_caballus
ENSSLDG00000023989	prpf18	92	51.582	ENSEEUG00000001171	-	100	51.582	Erinaceus_europaeus
ENSSLDG00000023989	prpf18	100	90.087	ENSELUG00000022190	prpf18	100	90.087	Esox_lucius
ENSSLDG00000023989	prpf18	100	84.503	ENSFCAG00000004436	-	100	84.503	Felis_catus
ENSSLDG00000023989	prpf18	93	80.000	ENSFALG00000001912	-	97	80.308	Ficedula_albicollis
ENSSLDG00000023989	prpf18	94	87.188	ENSFDAG00000014026	-	100	87.188	Fukomys_damarensis
ENSSLDG00000023989	prpf18	99	58.261	ENSFDAG00000010713	-	97	58.261	Fukomys_damarensis
ENSSLDG00000023989	prpf18	80	94.872	ENSFHEG00000020125	prpf18	98	94.757	Fundulus_heteroclitus
ENSSLDG00000023989	prpf18	99	87.941	ENSGMOG00000012210	prpf18	99	87.941	Gadus_morhua
ENSSLDG00000023989	prpf18	100	83.333	ENSGALG00000043593	-	100	83.333	Gallus_gallus
ENSSLDG00000023989	prpf18	100	92.962	ENSGAFG00000006034	prpf18	100	92.962	Gambusia_affinis
ENSSLDG00000023989	prpf18	100	93.842	ENSGACG00000012232	prpf18	100	93.842	Gasterosteus_aculeatus
ENSSLDG00000023989	prpf18	100	83.918	ENSGAGG00000016878	-	100	83.918	Gopherus_agassizii
ENSSLDG00000023989	prpf18	92	84.494	ENSGGOG00000025188	-	96	84.494	Gorilla_gorilla
ENSSLDG00000023989	prpf18	100	95.143	ENSHBUG00000010264	prpf18	100	95.143	Haplochromis_burtoni
ENSSLDG00000023989	prpf18	100	84.795	ENSHGLG00000018534	PRPF18	100	84.795	Heterocephalus_glaber_female
ENSSLDG00000023989	prpf18	94	86.875	ENSHGLG00100012161	-	98	86.875	Heterocephalus_glaber_male
ENSSLDG00000023989	prpf18	100	97.361	ENSHCOG00000015987	prpf18	100	97.361	Hippocampus_comes
ENSSLDG00000023989	prpf18	100	83.286	ENSIPUG00000007432	prpf18	100	83.853	Ictalurus_punctatus
ENSSLDG00000023989	prpf18	100	84.503	ENSSTOG00000008735	-	100	84.503	Ictidomys_tridecemlineatus
ENSSLDG00000023989	prpf18	100	63.265	ENSJJAG00000015191	-	100	63.265	Jaculus_jaculus
ENSSLDG00000023989	prpf18	100	85.380	ENSJJAG00000024041	-	100	85.380	Jaculus_jaculus
ENSSLDG00000023989	prpf18	100	93.255	ENSKMAG00000012124	prpf18	100	93.255	Kryptolebias_marmoratus
ENSSLDG00000023989	prpf18	97	92.771	ENSLBEG00000028466	prpf18	98	92.771	Labrus_bergylta
ENSSLDG00000023989	prpf18	100	83.918	ENSLACG00000009885	prpf18	100	84.795	Latimeria_chalumnae
ENSSLDG00000023989	prpf18	100	88.889	ENSLOCG00000016736	prpf18	100	88.889	Lepisosteus_oculatus
ENSSLDG00000023989	prpf18	100	85.380	ENSLAFG00000007753	-	100	85.380	Loxodonta_africana
ENSSLDG00000023989	prpf18	100	85.380	ENSMFAG00000000540	-	100	85.380	Macaca_fascicularis
ENSSLDG00000023989	prpf18	100	85.380	ENSMMUG00000015071	PRPF18	100	85.380	Macaca_mulatta
ENSSLDG00000023989	prpf18	100	85.380	ENSMNEG00000024679	-	100	85.380	Macaca_nemestrina
ENSSLDG00000023989	prpf18	100	70.175	ENSMLEG00000031715	-	100	70.175	Mandrillus_leucophaeus
ENSSLDG00000023989	prpf18	100	96.857	ENSMAMG00000006610	prpf18	100	96.857	Mastacembelus_armatus
ENSSLDG00000023989	prpf18	100	95.143	ENSMZEG00005019392	prpf18	100	95.143	Maylandia_zebra
ENSSLDG00000023989	prpf18	100	83.333	ENSMGAG00000005023	-	100	83.333	Meleagris_gallopavo
ENSSLDG00000023989	prpf18	100	85.673	ENSMICG00000006572	-	100	85.673	Microcebus_murinus
ENSSLDG00000023989	prpf18	100	85.380	ENSMOCG00000021468	Prpf18	100	85.380	Microtus_ochrogaster
ENSSLDG00000023989	prpf18	100	94.721	ENSMMOG00000013012	prpf18	100	94.721	Mola_mola
ENSSLDG00000023989	prpf18	99	78.448	ENSMODG00000016902	-	95	78.448	Monodelphis_domestica
ENSSLDG00000023989	prpf18	100	77.193	ENSMODG00000024043	-	100	77.193	Monodelphis_domestica
ENSSLDG00000023989	prpf18	100	87.500	ENSMALG00000005486	prpf18	100	87.791	Monopterus_albus
ENSSLDG00000023989	prpf18	100	84.795	MGP_CAROLIEiJ_G0023143	Prpf18	100	95.890	Mus_caroli
ENSSLDG00000023989	prpf18	100	85.088	ENSMUSG00000039449	Prpf18	100	95.890	Mus_musculus
ENSSLDG00000023989	prpf18	100	85.088	MGP_PahariEiJ_G0019203	Prpf18	100	95.890	Mus_pahari
ENSSLDG00000023989	prpf18	100	84.795	MGP_SPRETEiJ_G0024061	Prpf18	100	95.890	Mus_spretus
ENSSLDG00000023989	prpf18	100	84.503	ENSMPUG00000000938	-	100	84.503	Mustela_putorius_furo
ENSSLDG00000023989	prpf18	100	84.503	ENSMLUG00000009200	-	100	84.503	Myotis_lucifugus
ENSSLDG00000023989	prpf18	100	85.380	ENSNGAG00000012500	-	100	85.380	Nannospalax_galili
ENSSLDG00000023989	prpf18	68	82.328	ENSNGAG00000023550	-	82	83.043	Nannospalax_galili
ENSSLDG00000023989	prpf18	100	95.308	ENSNBRG00000001778	prpf18	100	95.308	Neolamprologus_brichardi
ENSSLDG00000023989	prpf18	100	85.380	ENSNLEG00000012186	-	100	85.380	Nomascus_leucogenys
ENSSLDG00000023989	prpf18	76	73.359	ENSMEUG00000005032	-	75	71.815	Notamacropus_eugenii
ENSSLDG00000023989	prpf18	77	66.038	ENSOPRG00000002153	-	100	66.038	Ochotona_princeps
ENSSLDG00000023989	prpf18	100	84.503	ENSODEG00000003770	-	100	84.503	Octodon_degus
ENSSLDG00000023989	prpf18	98	94.910	ENSONIG00000014854	prpf18	96	94.910	Oreochromis_niloticus
ENSSLDG00000023989	prpf18	100	84.795	ENSOANG00000015404	-	100	84.795	Ornithorhynchus_anatinus
ENSSLDG00000023989	prpf18	100	85.088	ENSOCUG00000027756	-	96	85.933	Oryctolagus_cuniculus
ENSSLDG00000023989	prpf18	100	94.000	ENSORLG00000010293	prpf18	100	94.000	Oryzias_latipes
ENSSLDG00000023989	prpf18	100	94.135	ENSORLG00020001530	prpf18	100	94.135	Oryzias_latipes_hni
ENSSLDG00000023989	prpf18	100	93.842	ENSORLG00015013705	prpf18	100	93.842	Oryzias_latipes_hsok
ENSSLDG00000023989	prpf18	100	95.015	ENSOMEG00000009167	prpf18	100	95.015	Oryzias_melastigma
ENSSLDG00000023989	prpf18	100	84.503	ENSOGAG00000007294	-	100	84.503	Otolemur_garnettii
ENSSLDG00000023989	prpf18	100	82.906	ENSOARG00000006243	-	100	82.906	Ovis_aries
ENSSLDG00000023989	prpf18	100	85.380	ENSPPAG00000041959	-	100	85.380	Pan_paniscus
ENSSLDG00000023989	prpf18	100	84.503	ENSPPRG00000000107	-	100	84.503	Panthera_pardus
ENSSLDG00000023989	prpf18	100	84.503	ENSPTIG00000021094	-	100	84.503	Panthera_tigris_altaica
ENSSLDG00000023989	prpf18	100	85.380	ENSPTRG00000002306	PRPF18	100	85.380	Pan_troglodytes
ENSSLDG00000023989	prpf18	100	85.088	ENSPANG00000023346	-	100	85.088	Papio_anubis
ENSSLDG00000023989	prpf18	100	88.034	ENSPKIG00000014128	prpf18	96	88.034	Paramormyrops_kingsleyae
ENSSLDG00000023989	prpf18	100	83.918	ENSPSIG00000016064	-	100	83.918	Pelodiscus_sinensis
ENSSLDG00000023989	prpf18	100	86.842	ENSPMGG00000016486	prpf18	100	86.842	Periophthalmus_magnuspinnatus
ENSSLDG00000023989	prpf18	100	85.088	ENSPEMG00000013704	Prpf18	100	85.088	Peromyscus_maniculatus_bairdii
ENSSLDG00000023989	prpf18	100	73.775	ENSPMAG00000000204	prpf18	100	73.775	Petromyzon_marinus
ENSSLDG00000023989	prpf18	92	84.177	ENSPCIG00000012963	-	99	84.177	Phascolarctos_cinereus
ENSSLDG00000023989	prpf18	100	91.714	ENSPFOG00000017611	prpf18	100	91.714	Poecilia_formosa
ENSSLDG00000023989	prpf18	100	92.082	ENSPLAG00000000369	prpf18	100	92.082	Poecilia_latipinna
ENSSLDG00000023989	prpf18	100	92.375	ENSPMEG00000005183	prpf18	100	92.375	Poecilia_mexicana
ENSSLDG00000023989	prpf18	100	92.669	ENSPREG00000015232	prpf18	100	92.669	Poecilia_reticulata
ENSSLDG00000023989	prpf18	100	85.088	ENSPPYG00000002101	PRPF18	100	85.088	Pongo_abelii
ENSSLDG00000023989	prpf18	100	67.544	ENSPCAG00000010833	-	100	67.544	Procavia_capensis
ENSSLDG00000023989	prpf18	100	80.409	ENSPCOG00000013057	-	100	80.409	Propithecus_coquereli
ENSSLDG00000023989	prpf18	100	51.754	ENSPVAG00000002947	-	100	51.754	Pteropus_vampyrus
ENSSLDG00000023989	prpf18	100	95.429	ENSPNYG00000003554	prpf18	100	95.429	Pundamilia_nyererei
ENSSLDG00000023989	prpf18	100	90.028	ENSPNAG00000023151	prpf18	100	90.028	Pygocentrus_nattereri
ENSSLDG00000023989	prpf18	100	84.795	ENSRNOG00000018396	Prpf18	100	84.795	Rattus_norvegicus
ENSSLDG00000023989	prpf18	100	85.673	ENSRBIG00000028028	-	100	85.673	Rhinopithecus_bieti
ENSSLDG00000023989	prpf18	100	85.380	ENSRROG00000040695	-	100	85.380	Rhinopithecus_roxellana
ENSSLDG00000023989	prpf18	100	85.088	ENSSBOG00000034482	-	100	85.088	Saimiri_boliviensis_boliviensis
ENSSLDG00000023989	prpf18	100	71.053	ENSSHAG00000009669	-	100	71.053	Sarcophilus_harrisii
ENSSLDG00000023989	prpf18	100	85.088	ENSSHAG00000016463	-	100	85.088	Sarcophilus_harrisii
ENSSLDG00000023989	prpf18	77	45.833	ENSSFOG00015021154	-	89	48.498	Scleropages_formosus
ENSSLDG00000023989	prpf18	98	86.087	ENSSFOG00015022118	prpf18	100	80.980	Scleropages_formosus
ENSSLDG00000023989	prpf18	100	94.286	ENSSMAG00000005308	prpf18	100	94.286	Scophthalmus_maximus
ENSSLDG00000023989	prpf18	100	99.714	ENSSDUG00000015428	prpf18	100	99.714	Seriola_dumerili
ENSSLDG00000023989	prpf18	100	56.433	ENSSARG00000005307	-	100	56.433	Sorex_araneus
ENSSLDG00000023989	prpf18	100	84.211	ENSSPUG00000002619	-	100	84.211	Sphenodon_punctatus
ENSSLDG00000023989	prpf18	100	98.286	ENSSPAG00000019502	prpf18	100	98.286	Stegastes_partitus
ENSSLDG00000023989	prpf18	100	84.795	ENSSSCG00000026354	-	100	84.795	Sus_scrofa
ENSSLDG00000023989	prpf18	100	83.041	ENSTGUG00000002286	-	100	83.041	Taeniopygia_guttata
ENSSLDG00000023989	prpf18	100	89.736	ENSTRUG00000011278	prpf18	100	89.736	Takifugu_rubripes
ENSSLDG00000023989	prpf18	100	90.909	ENSTNIG00000000911	prpf18	100	90.909	Tetraodon_nigroviridis
ENSSLDG00000023989	prpf18	80	98.718	ENSTBEG00000013011	-	79	98.718	Tupaia_belangeri
ENSSLDG00000023989	prpf18	100	85.673	ENSTTRG00000011117	PRPF18	100	85.673	Tursiops_truncatus
ENSSLDG00000023989	prpf18	91	87.781	ENSUAMG00000001815	-	93	87.781	Ursus_americanus
ENSSLDG00000023989	prpf18	100	80.117	ENSUMAG00000012329	-	100	80.117	Ursus_maritimus
ENSSLDG00000023989	prpf18	100	79.240	ENSVPAG00000011486	-	100	79.240	Vicugna_pacos
ENSSLDG00000023989	prpf18	100	84.795	ENSVVUG00000005453	-	100	84.795	Vulpes_vulpes
ENSSLDG00000023989	prpf18	100	75.942	ENSXETG00000024057	prpf18	100	75.652	Xenopus_tropicalis
ENSSLDG00000023989	prpf18	100	92.420	ENSXCOG00000020414	prpf18	100	92.420	Xiphophorus_couchianus
ENSSLDG00000023989	prpf18	100	92.962	ENSXMAG00000004713	prpf18	91	92.962	Xiphophorus_maculatus