EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSLDG00000024011 (Gene tree)
Gene ID
-
Gene Symbol
puf60b
Alias
fe37c05|si:ch211-12p8.2|si:zc12p8.2|wu:fb33e11|wu:fe37c05|zgc:86806
Full Name
poly(U) binding splicing factor 60
Gene Type
protein_coding
Species
Seriola_lalandi_dorsalis
Status
putative
Strand
Plus strand
Length
8541 bases
Position
chrPEQF01098839.1:826635-835175
Accession
111656588
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSLDP00000031307RRM_1PF00076.221.6e-4412
ENSSLDP00000031307RRM_1PF00076.221.6e-4422
ENSSLDP00000031270RRM_1PF00076.221.7e-4412
ENSSLDP00000031270RRM_1PF00076.221.7e-4422
ENSSLDP00000031297RRM_1PF00076.221.8e-4412
ENSSLDP00000031297RRM_1PF00076.221.8e-4422
ENSSLDP00000031330RRM_1PF00076.221.9e-4412
ENSSLDP00000031330RRM_1PF00076.221.9e-4422
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSLDT00000032166-2791XM_023408336ENSSLDP00000031270527 (aa)XP_023264104UPI000BBE10C6
ENSSLDT00000032226-1626-ENSSLDP00000031330541 (aa)--
ENSSLDT00000032203-2643XM_023408340ENSSLDP00000031307523 (aa)XP_023264108UPI000BBE8020
ENSSLDT00000032193-2694XM_023408335ENSSLDP00000031297540 (aa)XP_023264103UPI0008755DC6
Gene Model
Click here to download ENSSLDG00000024011's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000024011's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSLDG00000024011puf60b5238.235ENSSLDG00000016151-6438.235
ENSSLDG00000024011puf60b10079.775ENSSLDG00000007366-9982.150
ENSSLDG00000024011puf60b5631.250ENSSLDG00000013025pabpc46132.558
ENSSLDG00000024011puf60b5535.294ENSSLDG00000022742u2af2a6237.255
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSLDG00000024011puf60b10083.738ENSG00000179950PUF6010085.988Homo_sapiens
ENSSLDG00000024011puf60b10096.584ENSAPOG00000001713puf60b9899.031Acanthochromis_polyacanthus
ENSSLDG00000024011puf60b10081.869ENSAMEG00000006406PUF609383.588Ailuropoda_melanoleuca
ENSSLDG00000024011puf60b10075.947ENSACIG00000003263-9978.252Amphilophus_citrinellus
ENSSLDG00000024011puf60b10096.015ENSACIG00000021705puf60b10098.635Amphilophus_citrinellus
ENSSLDG00000024011puf60b10096.584ENSAOCG00000005395puf60b10099.220Amphiprion_ocellaris
ENSSLDG00000024011puf60b10081.818ENSAOCG00000015558-9884.333Amphiprion_ocellaris
ENSSLDG00000024011puf60b9875.439ENSAPEG00000001836-9975.382Amphiprion_percula
ENSSLDG00000024011puf60b10092.925ENSAPEG00000011923puf60b10092.925Amphiprion_percula
ENSSLDG00000024011puf60b10080.114ENSATEG00000006303-9883.559Anabas_testudineus
ENSSLDG00000024011puf60b10097.154ENSATEG00000001730puf60b9899.612Anabas_testudineus
ENSSLDG00000024011puf60b10084.486ENSAPLG00000010150PUF609986.450Anas_platyrhynchos
ENSSLDG00000024011puf60b10083.364ENSACAG00000001645PUF609784.557Anolis_carolinensis
ENSSLDG00000024011puf60b10083.551ENSANAG00000018626PUF6010085.797Aotus_nancymaae
ENSSLDG00000024011puf60b10096.015ENSACLG00000004462puf60b10098.635Astatotilapia_calliptera
ENSSLDG00000024011puf60b10084.416ENSAMXG00000036570puf60a10084.375Astyanax_mexicanus
ENSSLDG00000024011puf60b10078.413ENSAMXG00000041030puf60b10081.025Astyanax_mexicanus
ENSSLDG00000024011puf60b10084.112ENSBTAG00000037493PUF609985.741Bos_taurus
ENSSLDG00000024011puf60b9346.400WBGene00004389rnp-68351.974Caenorhabditis_elegans
ENSSLDG00000024011puf60b10083.738ENSCJAG00000021485PUF609885.361Callithrix_jacchus
ENSSLDG00000024011puf60b10083.551ENSCAFG00000001400PUF609385.171Canis_familiaris
ENSSLDG00000024011puf60b10083.925ENSCAFG00020018754PUF609885.551Canis_lupus_dingo
ENSSLDG00000024011puf60b10084.112ENSCHIG00000001618PUF608686.069Capra_hircus
ENSSLDG00000024011puf60b10083.925ENSTSYG00000011912PUF6010086.180Carlito_syrichta
ENSSLDG00000024011puf60b10079.406ENSCPOG00000014613PUF609381.250Cavia_porcellus
ENSSLDG00000024011puf60b10083.925ENSCCAG00000007744PUF609885.551Cebus_capucinus
ENSSLDG00000024011puf60b10083.738ENSCATG00000035405PUF609885.361Cercocebus_atys
ENSSLDG00000024011puf60b10084.112ENSCLAG00000009154PUF609285.741Chinchilla_lanigera
ENSSLDG00000024011puf60b10083.738ENSCSAG00000008878PUF6010085.988Chlorocebus_sabaeus
ENSSLDG00000024011puf60b10083.551ENSCPBG00000005595PUF609885.687Chrysemys_picta_bellii
ENSSLDG00000024011puf60b9948.417ENSCING00000008436-9947.320Ciona_intestinalis
ENSSLDG00000024011puf60b6261.774ENSCING00000002156-8761.774Ciona_intestinalis
ENSSLDG00000024011puf60b9248.400ENSCSAVG00000004765-9748.024Ciona_savignyi
ENSSLDG00000024011puf60b9853.947ENSCSAVG00000001385-9954.286Ciona_savignyi
ENSSLDG00000024011puf60b8182.798ENSCANG00000041843PUF6010085.545Colobus_angolensis_palliatus
ENSSLDG00000024011puf60b10084.299ENSCGRG00001017442Puf609286.260Cricetulus_griseus_chok1gshd
ENSSLDG00000024011puf60b10084.299ENSCGRG00000003717Puf609286.260Cricetulus_griseus_crigri
ENSSLDG00000024011puf60b10096.584ENSCSEG00000019887puf60b9298.837Cynoglossus_semilaevis
ENSSLDG00000024011puf60b9975.095ENSCSEG00000014845-9276.067Cynoglossus_semilaevis
ENSSLDG00000024011puf60b9179.876ENSCVAG00000001560-9881.838Cyprinodon_variegatus
ENSSLDG00000024011puf60b10095.066ENSCVAG00000009386puf60b10097.661Cyprinodon_variegatus
ENSSLDG00000024011puf60b10084.758ENSDARG00000032175puf60a9992.766Danio_rerio
ENSSLDG00000024011puf60b10079.482ENSDARG00000001241puf60b9998.413Danio_rerio
ENSSLDG00000024011puf60b9969.697ENSDNOG00000043278PUF609071.595Dasypus_novemcinctus
ENSSLDG00000024011puf60b10084.299ENSDORG00000004585Puf609585.932Dipodomys_ordii
ENSSLDG00000024011puf60b8063.448FBgn0028577hfp9949.110Drosophila_melanogaster
ENSSLDG00000024011puf60b9861.285ENSEBUG00000014291puf60b8463.986Eptatretus_burgeri
ENSSLDG00000024011puf60b9867.054ENSEBUG00000005470-9166.108Eptatretus_burgeri
ENSSLDG00000024011puf60b10083.925ENSEASG00005009695PUF609885.551Equus_asinus_asinus
ENSSLDG00000024011puf60b10083.925ENSECAG00000024681PUF609785.551Equus_caballus
ENSSLDG00000024011puf60b10088.787ENSELUG00000006507puf60b10088.869Esox_lucius
ENSSLDG00000024011puf60b10086.441ENSELUG00000018443-9888.462Esox_lucius
ENSSLDG00000024011puf60b10083.925ENSFCAG00000001045PUF6010086.180Felis_catus
ENSSLDG00000024011puf60b10075.140ENSFALG00000001136PUF609877.290Ficedula_albicollis
ENSSLDG00000024011puf60b10083.925ENSFDAG00000017177PUF609285.878Fukomys_damarensis
ENSSLDG00000024011puf60b10095.825ENSFHEG00000020046puf60b10098.441Fundulus_heteroclitus
ENSSLDG00000024011puf60b9680.594ENSFHEG00000021687PUF6010083.817Fundulus_heteroclitus
ENSSLDG00000024011puf60b10082.143ENSGMOG00000006392puf60b9983.493Gadus_morhua
ENSSLDG00000024011puf60b6786.275ENSGALG00000039901PUF609489.796Gallus_gallus
ENSSLDG00000024011puf60b10095.636ENSGAFG00000021040puf60b10098.246Gambusia_affinis
ENSSLDG00000024011puf60b10078.639ENSGAFG00000004334-9981.520Gambusia_affinis
ENSSLDG00000024011puf60b10071.023ENSGACG00000001484-10072.374Gasterosteus_aculeatus
ENSSLDG00000024011puf60b10083.112ENSGACG00000004717puf60b9983.650Gasterosteus_aculeatus
ENSSLDG00000024011puf60b10083.551ENSGAGG00000013289PUF609185.687Gopherus_agassizii
ENSSLDG00000024011puf60b10083.738ENSGGOG00000004646PUF609985.038Gorilla_gorilla
ENSSLDG00000024011puf60b10081.439ENSHBUG00000009634-9982.197Haplochromis_burtoni
ENSSLDG00000024011puf60b10096.015ENSHBUG00000015118puf60b10098.635Haplochromis_burtoni
ENSSLDG00000024011puf60b10083.925ENSHGLG00000006111PUF609285.878Heterocephalus_glaber_female
ENSSLDG00000024011puf60b10083.925ENSHGLG00100012362PUF609285.878Heterocephalus_glaber_male
ENSSLDG00000024011puf60b10096.805ENSHCOG00000015541puf60b10096.629Hippocampus_comes
ENSSLDG00000024011puf60b9866.031ENSHCOG00000000378-9966.667Hippocampus_comes
ENSSLDG00000024011puf60b10082.991ENSIPUG00000002453puf60a9985.029Ictalurus_punctatus
ENSSLDG00000024011puf60b10080.074ENSIPUG00000004660puf60b9982.027Ictalurus_punctatus
ENSSLDG00000024011puf60b10084.112ENSSTOG00000025037PUF609385.741Ictidomys_tridecemlineatus
ENSSLDG00000024011puf60b10084.299ENSJJAG00000001076Puf609385.932Jaculus_jaculus
ENSSLDG00000024011puf60b10076.636ENSKMAG00000010106-10078.927Kryptolebias_marmoratus
ENSSLDG00000024011puf60b10095.636ENSKMAG00000016745puf60b10098.246Kryptolebias_marmoratus
ENSSLDG00000024011puf60b10096.774ENSLBEG00000012505puf60b9996.774Labrus_bergylta
ENSSLDG00000024011puf60b7277.143ENSLACG00000005456PUF609979.189Latimeria_chalumnae
ENSSLDG00000024011puf60b10086.957ENSLOCG00000010106puf60b9888.996Lepisosteus_oculatus
ENSSLDG00000024011puf60b10082.991ENSLAFG00000022929PUF609682.900Loxodonta_africana
ENSSLDG00000024011puf60b10083.738ENSMFAG00000043373PUF609885.361Macaca_fascicularis
ENSSLDG00000024011puf60b10083.738ENSMMUG00000013558PUF609985.038Macaca_mulatta
ENSSLDG00000024011puf60b10083.738ENSMNEG00000031099PUF609885.361Macaca_nemestrina
ENSSLDG00000024011puf60b10083.738ENSMLEG00000040009PUF6010085.988Mandrillus_leucophaeus
ENSSLDG00000024011puf60b10081.474ENSMAMG00000019476-9982.798Mastacembelus_armatus
ENSSLDG00000024011puf60b10097.913ENSMAMG00000010394puf60b10097.913Mastacembelus_armatus
ENSSLDG00000024011puf60b10096.015ENSMZEG00005018515puf60b10098.635Maylandia_zebra
ENSSLDG00000024011puf60b10081.439ENSMZEG00005019425-9982.197Maylandia_zebra
ENSSLDG00000024011puf60b10084.486ENSMGAG00000013070PUF609590.116Meleagris_gallopavo
ENSSLDG00000024011puf60b6986.898ENSMAUG00000014267-8989.807Mesocricetus_auratus
ENSSLDG00000024011puf60b9667.181ENSMAUG00000018549-9569.400Mesocricetus_auratus
ENSSLDG00000024011puf60b10083.925ENSMICG00000012226PUF609985.551Microcebus_murinus
ENSSLDG00000024011puf60b10084.299ENSMOCG00000018780Puf609386.260Microtus_ochrogaster
ENSSLDG00000024011puf60b10096.774ENSMMOG00000004217puf60b10099.415Mola_mola
ENSSLDG00000024011puf60b10074.573ENSMMOG00000018059-9976.606Mola_mola
ENSSLDG00000024011puf60b10083.738ENSMODG00000009161PUF609684.015Monodelphis_domestica
ENSSLDG00000024011puf60b10080.114ENSMALG00000000200-9882.398Monopterus_albus
ENSSLDG00000024011puf60b10091.271ENSMALG00000006797puf60b10090.926Monopterus_albus
ENSSLDG00000024011puf60b10084.486MGP_CAROLIEiJ_G0019910Puf609286.450Mus_caroli
ENSSLDG00000024011puf60b10084.486ENSMUSG00000002524Puf609286.450Mus_musculus
ENSSLDG00000024011puf60b10084.486MGP_PahariEiJ_G0019920Puf609286.450Mus_pahari
ENSSLDG00000024011puf60b10084.486MGP_SPRETEiJ_G0020812Puf609286.450Mus_spretus
ENSSLDG00000024011puf60b10083.738ENSMPUG00000008137PUF609285.687Mustela_putorius_furo
ENSSLDG00000024011puf60b9979.389ENSMLUG00000013032-9879.278Myotis_lucifugus
ENSSLDG00000024011puf60b10083.551ENSMLUG00000000238-9385.171Myotis_lucifugus
ENSSLDG00000024011puf60b10084.299ENSNGAG00000000712Puf6010086.564Nannospalax_galili
ENSSLDG00000024011puf60b8397.494ENSNBRG00000013047puf60b9797.602Neolamprologus_brichardi
ENSSLDG00000024011puf60b10081.439ENSNBRG00000017223-9982.197Neolamprologus_brichardi
ENSSLDG00000024011puf60b10083.738ENSNLEG00000002156PUF609985.038Nomascus_leucogenys
ENSSLDG00000024011puf60b7094.585ENSOPRG00000002147PUF607294.585Ochotona_princeps
ENSSLDG00000024011puf60b9862.162ENSODEG00000015513-9961.437Octodon_degus
ENSSLDG00000024011puf60b7287.006ENSODEG00000014024-8990.087Octodon_degus
ENSSLDG00000024011puf60b10081.250ENSONIG00000014030-9883.172Oreochromis_niloticus
ENSSLDG00000024011puf60b10096.015ENSONIG00000006247puf60b9898.450Oreochromis_niloticus
ENSSLDG00000024011puf60b9770.233ENSOANG00000006962PUF609871.485Ornithorhynchus_anatinus
ENSSLDG00000024011puf60b10094.877ENSORLG00000012279puf60b10097.466Oryzias_latipes
ENSSLDG00000024011puf60b9980.488ENSORLG00000028655-9982.274Oryzias_latipes
ENSSLDG00000024011puf60b10094.877ENSORLG00020007333puf6010097.466Oryzias_latipes_hni
ENSSLDG00000024011puf60b9981.096ENSORLG00020018144-9882.625Oryzias_latipes_hni
ENSSLDG00000024011puf60b9980.907ENSORLG00015016833-9882.625Oryzias_latipes_hsok
ENSSLDG00000024011puf60b10094.140ENSORLG00015007718puf60b10097.087Oryzias_latipes_hsok
ENSSLDG00000024011puf60b9980.682ENSOMEG00000022185-9981.439Oryzias_melastigma
ENSSLDG00000024011puf60b10096.584ENSOMEG00000001643puf60b10096.481Oryzias_melastigma
ENSSLDG00000024011puf60b10084.112ENSOGAG00000006259PUF609385.741Otolemur_garnettii
ENSSLDG00000024011puf60b9683.939ENSOARG00000016235PUF609883.939Ovis_aries
ENSSLDG00000024011puf60b10083.738ENSPPAG00000029933PUF609885.361Pan_paniscus
ENSSLDG00000024011puf60b10083.925ENSPPRG00000003257PUF6010086.180Panthera_pardus
ENSSLDG00000024011puf60b10081.682ENSPTIG00000009795PUF609983.270Panthera_tigris_altaica
ENSSLDG00000024011puf60b10083.738ENSPTRG00000043963-9985.038Pan_troglodytes
ENSSLDG00000024011puf60b10083.738ENSPTRG00000020670PUF609885.361Pan_troglodytes
ENSSLDG00000024011puf60b10083.738ENSPANG00000021936PUF609885.361Papio_anubis
ENSSLDG00000024011puf60b10087.382ENSPKIG00000004295puf60a9992.239Paramormyrops_kingsleyae
ENSSLDG00000024011puf60b10088.235ENSPKIG00000012204puf60b10091.423Paramormyrops_kingsleyae
ENSSLDG00000024011puf60b10083.925ENSPSIG00000004679PUF609885.878Pelodiscus_sinensis
ENSSLDG00000024011puf60b10093.774ENSPMGG00000013444puf60b10095.560Periophthalmus_magnuspinnatus
ENSSLDG00000024011puf60b10084.299ENSPEMG00000008820Puf609286.260Peromyscus_maniculatus_bairdii
ENSSLDG00000024011puf60b10084.112ENSPCIG00000020270PUF609985.633Phascolarctos_cinereus
ENSSLDG00000024011puf60b10080.151ENSPFOG00000011118-9882.592Poecilia_formosa
ENSSLDG00000024011puf60b10095.825ENSPFOG00000019217puf60b9995.736Poecilia_formosa
ENSSLDG00000024011puf60b10080.529ENSPLAG00000017025-9182.592Poecilia_latipinna
ENSSLDG00000024011puf60b10095.825ENSPLAG00000010754puf60b10098.441Poecilia_latipinna
ENSSLDG00000024011puf60b10095.825ENSPMEG00000000838puf60b10098.441Poecilia_mexicana
ENSSLDG00000024011puf60b10080.340ENSPMEG00000009767-9182.785Poecilia_mexicana
ENSSLDG00000024011puf60b10098.102ENSPREG00000005440puf60b10097.963Poecilia_reticulata
ENSSLDG00000024011puf60b8181.193ENSPPYG00000018951-9583.886Pongo_abelii
ENSSLDG00000024011puf60b8182.798ENSPCAG00000014837PUF6010085.545Procavia_capensis
ENSSLDG00000024011puf60b10083.738ENSPCOG00000027981PUF609985.361Propithecus_coquereli
ENSSLDG00000024011puf60b10096.203ENSPVAG00000016167PUF608196.203Pteropus_vampyrus
ENSSLDG00000024011puf60b10081.439ENSPNYG00000004273-9982.197Pundamilia_nyererei
ENSSLDG00000024011puf60b10096.015ENSPNYG00000002556puf60b10098.635Pundamilia_nyererei
ENSSLDG00000024011puf60b9979.271ENSPNAG00000019415puf60b9178.095Pygocentrus_nattereri
ENSSLDG00000024011puf60b9885.356ENSPNAG00000019909puf60a9985.164Pygocentrus_nattereri
ENSSLDG00000024011puf60b10084.486ENSRNOG00000009960Puf609286.450Rattus_norvegicus
ENSSLDG00000024011puf60b10083.738ENSRBIG00000035274PUF609985.038Rhinopithecus_bieti
ENSSLDG00000024011puf60b10083.738ENSRROG00000029360PUF609985.361Rhinopithecus_roxellana
ENSSLDG00000024011puf60b10082.430ENSSBOG00000027089PUF609884.030Saimiri_boliviensis_boliviensis
ENSSLDG00000024011puf60b9083.230ENSSHAG00000006668PUF609283.539Sarcophilus_harrisii
ENSSLDG00000024011puf60b10081.426ENSSFOG00015019619puf60b9986.179Scleropages_formosus
ENSSLDG00000024011puf60b10084.375ENSSFOG00015019371puf60a9890.428Scleropages_formosus
ENSSLDG00000024011puf60b75100.000ENSSMAG00000016381puf60b78100.000Scophthalmus_maximus
ENSSLDG00000024011puf60b9781.836ENSSDUG00000007048-9684.661Seriola_dumerili
ENSSLDG00000024011puf60b10099.431ENSSDUG00000009935puf60b9999.437Seriola_dumerili
ENSSLDG00000024011puf60b6675.354ENSSPUG00000013518PUF609278.466Sphenodon_punctatus
ENSSLDG00000024011puf60b10099.620ENSSPAG00000012144puf60b10099.620Stegastes_partitus
ENSSLDG00000024011puf60b10081.509ENSSPAG00000020285-10084.302Stegastes_partitus
ENSSLDG00000024011puf60b10083.925ENSSSCG00000038800PUF609882.792Sus_scrofa
ENSSLDG00000024011puf60b10081.716ENSTGUG00000012797-9983.619Taeniopygia_guttata
ENSSLDG00000024011puf60b9879.648ENSTRUG00000008843-10078.988Takifugu_rubripes
ENSSLDG00000024011puf60b10097.407ENSTRUG00000005420puf60b10097.407Takifugu_rubripes
ENSSLDG00000024011puf60b10077.989ENSTNIG00000003069-9980.039Tetraodon_nigroviridis
ENSSLDG00000024011puf60b10094.687ENSTNIG00000013675puf60b9997.093Tetraodon_nigroviridis
ENSSLDG00000024011puf60b5782.295ENSTBEG00000002751-9786.254Tupaia_belangeri
ENSSLDG00000024011puf60b7763.562ENSTBEG00000001899-10066.952Tupaia_belangeri
ENSSLDG00000024011puf60b10082.056ENSTTRG00000017088PUF6010085.029Tursiops_truncatus
ENSSLDG00000024011puf60b10083.925ENSUAMG00000024917PUF609885.551Ursus_americanus
ENSSLDG00000024011puf60b10079.065ENSUMAG00000000272PUF609380.418Ursus_maritimus
ENSSLDG00000024011puf60b10083.925ENSVVUG00000022527PUF6010086.180Vulpes_vulpes
ENSSLDG00000024011puf60b10081.869ENSXETG00000012469puf609883.969Xenopus_tropicalis
ENSSLDG00000024011puf60b9895.686ENSXCOG00000012355puf60b10095.686Xiphophorus_couchianus
ENSSLDG00000024011puf60b10095.825ENSXMAG00000001862puf60b10098.441Xiphophorus_maculatus
ENSSLDG00000024011puf60b9979.344ENSXMAG00000010507-9879.304Xiphophorus_maculatus

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