EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000024197 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: secretion associated Ras related GTPase 1A
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 5335 bases
Position: chrPEQF01098995.1:358665-363999
Accession: 111660192
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000031504	MMR_HSR1	PF01926.23	8.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000032401	-	2539	XM_023413366	ENSSLDP00000031504	198 (aa)	XP_023269134	UPI000BBF278F

Gene Model

Click here to download ENSSLDG00000024197's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000024197's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000024197	-	100	83.838	ENSSLDG00000025558	sar1ab	100	83.838
ENSSLDG00000024197	-	58	35.345	ENSSLDG00000023797	ARL6	61	35.345
ENSSLDG00000024197	-	95	30.928	ENSSLDG00000003967	arl3l2	91	30.928
ENSSLDG00000024197	-	94	30.108	ENSSLDG00000025143	arf3b	96	30.108
ENSSLDG00000024197	-	94	30.108	ENSSLDG00000005289	-	96	30.108
ENSSLDG00000024197	-	72	35.135	ENSSLDG00000012103	-	72	35.135
ENSSLDG00000024197	-	85	35.088	ENSSLDG00000006512	-	77	35.088
ENSSLDG00000024197	-	91	32.044	ENSSLDG00000008504	-	94	32.044
ENSSLDG00000024197	-	64	36.364	ENSSLDG00000012798	-	71	36.364
ENSSLDG00000024197	-	56	38.261	ENSSLDG00000015190	arl4aa	59	38.261
ENSSLDG00000024197	-	92	32.065	ENSSLDG00000012946	arl1	94	32.065
ENSSLDG00000024197	-	86	32.584	ENSSLDG00000008208	-	82	32.584
ENSSLDG00000024197	-	92	32.240	ENSSLDG00000000124	arl2	93	32.240
ENSSLDG00000024197	-	100	84.848	ENSSLDG00000017052	sar1b	94	91.667
ENSSLDG00000024197	-	86	30.814	ENSSLDG00000009763	arl11	92	30.814
ENSSLDG00000024197	-	72	34.459	ENSSLDG00000017889	arl4cb	74	34.459
ENSSLDG00000024197	-	91	32.609	ENSSLDG00000013951	-	96	32.609
ENSSLDG00000024197	-	86	30.682	ENSSLDG00000005628	arl4d	82	30.682
ENSSLDG00000024197	-	73	33.103	ENSSLDG00000001636	-	52	33.103
ENSSLDG00000024197	-	91	31.492	ENSSLDG00000021639	arf2b	93	31.492
ENSSLDG00000024197	-	73	33.103	ENSSLDG00000011226	arl8a	73	33.103
ENSSLDG00000024197	-	94	31.053	ENSSLDG00000000746	ARL6	96	31.053

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000024197	-	100	84.343	ENSAPOG00000007186	sar1b	100	84.343	Acanthochromis_polyacanthus
ENSSLDG00000024197	-	100	98.485	ENSAPOG00000017891	-	100	98.485	Acanthochromis_polyacanthus
ENSSLDG00000024197	-	100	85.354	ENSACIG00000013634	sar1b	100	85.354	Amphilophus_citrinellus
ENSSLDG00000024197	-	100	97.475	ENSACIG00000024513	-	100	97.475	Amphilophus_citrinellus
ENSSLDG00000024197	-	100	98.485	ENSAOCG00000002627	-	100	98.485	Amphiprion_ocellaris
ENSSLDG00000024197	-	100	83.838	ENSAOCG00000005888	sar1b	100	83.838	Amphiprion_ocellaris
ENSSLDG00000024197	-	100	83.838	ENSAPEG00000022771	sar1b	100	83.838	Amphiprion_percula
ENSSLDG00000024197	-	100	98.485	ENSAPEG00000019680	-	100	98.485	Amphiprion_percula
ENSSLDG00000024197	-	100	96.465	ENSATEG00000023368	-	100	96.465	Anabas_testudineus
ENSSLDG00000024197	-	100	82.828	ENSATEG00000012904	sar1b	100	82.828	Anabas_testudineus
ENSSLDG00000024197	-	100	83.838	ENSACAG00000001470	-	100	83.838	Anolis_carolinensis
ENSSLDG00000024197	-	100	97.980	ENSACLG00000005011	-	100	97.980	Astatotilapia_calliptera
ENSSLDG00000024197	-	100	84.848	ENSACLG00000014649	sar1b	100	84.848	Astatotilapia_calliptera
ENSSLDG00000024197	-	100	90.404	ENSAMXG00000034192	-	91	90.404	Astyanax_mexicanus
ENSSLDG00000024197	-	59	90.598	ENSAMXG00000018108	sar1b	84	90.598	Astyanax_mexicanus
ENSSLDG00000024197	-	100	92.929	ENSCSEG00000016976	-	100	92.929	Cynoglossus_semilaevis
ENSSLDG00000024197	-	100	79.293	ENSCSEG00000015238	sar1b	97	79.293	Cynoglossus_semilaevis
ENSSLDG00000024197	-	100	86.364	ENSCVAG00000022959	sar1b	100	86.364	Cyprinodon_variegatus
ENSSLDG00000024197	-	100	85.859	ENSDARG00000103403	sar1b	100	85.859	Danio_rerio
ENSSLDG00000024197	-	99	68.878	FBgn0038947	Sar1	99	68.878	Drosophila_melanogaster
ENSSLDG00000024197	-	97	80.208	ENSEBUG00000011723	sar1b	97	80.208	Eptatretus_burgeri
ENSSLDG00000024197	-	100	86.869	ENSELUG00000020912	sar1b	100	86.869	Esox_lucius
ENSSLDG00000024197	-	100	85.354	ENSFHEG00000019865	sar1b	100	85.354	Fundulus_heteroclitus
ENSSLDG00000024197	-	100	85.354	ENSGMOG00000008023	sar1b	100	85.354	Gadus_morhua
ENSSLDG00000024197	-	100	83.838	ENSGAFG00000007081	sar1b	100	83.838	Gambusia_affinis
ENSSLDG00000024197	-	100	82.323	ENSGACG00000001474	sar1b	100	82.323	Gasterosteus_aculeatus
ENSSLDG00000024197	-	100	97.980	ENSHBUG00000018397	-	100	97.980	Haplochromis_burtoni
ENSSLDG00000024197	-	100	84.848	ENSHBUG00000000915	sar1b	100	84.848	Haplochromis_burtoni
ENSSLDG00000024197	-	100	83.838	ENSHCOG00000010953	sar1b	100	83.838	Hippocampus_comes
ENSSLDG00000024197	-	100	84.343	ENSIPUG00000020925	sar1b	100	84.343	Ictalurus_punctatus
ENSSLDG00000024197	-	100	88.384	ENSIPUG00000010046	sar1b	100	88.384	Ictalurus_punctatus
ENSSLDG00000024197	-	100	91.414	ENSKMAG00000014875	-	100	91.414	Kryptolebias_marmoratus
ENSSLDG00000024197	-	100	84.343	ENSKMAG00000019693	sar1b	100	84.343	Kryptolebias_marmoratus
ENSSLDG00000024197	-	100	81.818	ENSLBEG00000027550	sar1b	100	81.818	Labrus_bergylta
ENSSLDG00000024197	-	100	97.475	ENSLBEG00000016945	-	100	97.475	Labrus_bergylta
ENSSLDG00000024197	-	100	66.834	ENSLACG00000017029	-	100	66.834	Latimeria_chalumnae
ENSSLDG00000024197	-	100	80.808	ENSLACG00000010795	sar1b	100	80.808	Latimeria_chalumnae
ENSSLDG00000024197	-	100	87.374	ENSLOCG00000005214	-	100	87.374	Lepisosteus_oculatus
ENSSLDG00000024197	-	100	85.859	ENSLOCG00000010197	sar1b	100	85.859	Lepisosteus_oculatus
ENSSLDG00000024197	-	100	82.828	ENSMAMG00000021732	sar1b	100	82.828	Mastacembelus_armatus
ENSSLDG00000024197	-	100	97.980	ENSMZEG00005001012	-	100	97.980	Maylandia_zebra
ENSSLDG00000024197	-	100	84.848	ENSMZEG00005008942	sar1b	100	84.848	Maylandia_zebra
ENSSLDG00000024197	-	90	84.916	ENSMGAG00000005387	-	91	84.916	Meleagris_gallopavo
ENSSLDG00000024197	-	100	96.465	ENSMMOG00000013803	-	100	96.465	Mola_mola
ENSSLDG00000024197	-	100	83.333	ENSMALG00000016635	sar1b	97	81.868	Monopterus_albus
ENSSLDG00000024197	-	100	84.848	ENSNBRG00000008013	sar1b	100	84.848	Neolamprologus_brichardi
ENSSLDG00000024197	-	100	98.485	ENSNBRG00000014004	-	100	98.485	Neolamprologus_brichardi
ENSSLDG00000024197	-	100	84.848	ENSONIG00000017278	sar1b	100	84.848	Oreochromis_niloticus
ENSSLDG00000024197	-	100	85.354	ENSORLG00000000932	sar1b	100	85.354	Oryzias_latipes
ENSSLDG00000024197	-	100	85.354	ENSORLG00020021985	sar1b	100	85.354	Oryzias_latipes_hni
ENSSLDG00000024197	-	100	85.354	ENSORLG00015007044	sar1b	100	85.354	Oryzias_latipes_hsok
ENSSLDG00000024197	-	100	83.838	ENSOMEG00000001052	sar1b	100	83.838	Oryzias_melastigma
ENSSLDG00000024197	-	100	86.364	ENSPKIG00000017353	-	100	86.364	Paramormyrops_kingsleyae
ENSSLDG00000024197	-	100	83.838	ENSPKIG00000010688	sar1b	100	83.838	Paramormyrops_kingsleyae
ENSSLDG00000024197	-	59	88.793	ENSPMGG00000001234	sar1b	91	88.793	Periophthalmus_magnuspinnatus
ENSSLDG00000024197	-	100	80.100	ENSPMAG00000003593	sar1b	100	80.100	Petromyzon_marinus
ENSSLDG00000024197	-	100	83.838	ENSPFOG00000005666	sar1b	100	83.838	Poecilia_formosa
ENSSLDG00000024197	-	59	93.162	ENSPLAG00000001016	-	75	93.162	Poecilia_latipinna
ENSSLDG00000024197	-	100	84.343	ENSPLAG00000012223	sar1b	100	84.343	Poecilia_latipinna
ENSSLDG00000024197	-	100	83.838	ENSPMEG00000016831	sar1b	100	83.838	Poecilia_mexicana
ENSSLDG00000024197	-	60	92.373	ENSPREG00000002020	-	87	92.373	Poecilia_reticulata
ENSSLDG00000024197	-	100	83.838	ENSPREG00000005312	sar1b	90	83.838	Poecilia_reticulata
ENSSLDG00000024197	-	100	97.475	ENSPNYG00000021357	-	100	97.475	Pundamilia_nyererei
ENSSLDG00000024197	-	100	84.848	ENSPNYG00000012440	sar1b	100	84.848	Pundamilia_nyererei
ENSSLDG00000024197	-	100	86.364	ENSPNAG00000014683	sar1b	100	86.364	Pygocentrus_nattereri
ENSSLDG00000024197	-	100	90.909	ENSPNAG00000001123	-	100	90.909	Pygocentrus_nattereri
ENSSLDG00000024197	-	100	86.869	ENSSFOG00015020051	sar1b	100	86.869	Scleropages_formosus
ENSSLDG00000024197	-	100	85.859	ENSSFOG00015018128	-	100	85.859	Scleropages_formosus
ENSSLDG00000024197	-	100	96.465	ENSSMAG00000002165	-	100	96.465	Scophthalmus_maximus
ENSSLDG00000024197	-	100	81.313	ENSSMAG00000007106	sar1b	80	81.313	Scophthalmus_maximus
ENSSLDG00000024197	-	100	84.848	ENSSDUG00000020926	sar1b	100	84.848	Seriola_dumerili
ENSSLDG00000024197	-	100	100.000	ENSSDUG00000019629	-	100	100.000	Seriola_dumerili
ENSSLDG00000024197	-	100	83.838	ENSSPUG00000010247	-	100	83.838	Sphenodon_punctatus
ENSSLDG00000024197	-	100	84.848	ENSSPAG00000017634	sar1b	100	84.848	Stegastes_partitus
ENSSLDG00000024197	-	100	98.485	ENSSPAG00000015626	-	100	98.485	Stegastes_partitus
ENSSLDG00000024197	-	100	80.808	ENSTRUG00000023908	sar1b	100	80.808	Takifugu_rubripes
ENSSLDG00000024197	-	100	82.323	ENSTNIG00000016097	sar1b	100	82.323	Tetraodon_nigroviridis
ENSSLDG00000024197	-	90	83.146	ENSXCOG00000004160	sar1b	87	83.146	Xiphophorus_couchianus
ENSSLDG00000024197	-	59	91.453	ENSXCOG00000006154	-	79	91.453	Xiphophorus_couchianus
ENSSLDG00000024197	-	100	83.838	ENSXMAG00000008294	sar1b	100	83.838	Xiphophorus_maculatus