EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000024330 (Gene tree)
Gene ID: -
Gene Symbol: cpsf2
Alias: zgc:92484
Full Name: cleavage and polyadenylation specific factor 2
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 10669 bases
Position: chrPEQF01099023.1:4427921-4438589
Accession: 111661506
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000031695	Beta-Casp	PF10996.8	6.2e-21	1	1
ENSSLDP00000031695	Lactamase_B	PF00753.27	4.7e-05	1	1
ENSSLDP00000031695	RMMBL	PF07521.12	1.5e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000032602	-	4675	XM_023415101	ENSSLDP00000031695	787 (aa)	XP_023270869	UPI000C6F899B

Gene Model

Click here to download ENSSLDG00000024330's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000024330's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000024330	cpsf2	100	85.678	ENSG00000165934	CPSF2	100	87.500	Homo_sapiens
ENSSLDG00000024330	cpsf2	100	97.078	ENSAPOG00000001242	cpsf2	100	97.078	Acanthochromis_polyacanthus
ENSSLDG00000024330	cpsf2	100	96.066	ENSACIG00000009331	cpsf2	100	96.066	Amphilophus_citrinellus
ENSSLDG00000024330	cpsf2	100	97.332	ENSAOCG00000014095	cpsf2	100	97.332	Amphiprion_ocellaris
ENSSLDG00000024330	cpsf2	100	97.332	ENSAPEG00000009158	cpsf2	100	97.332	Amphiprion_percula
ENSSLDG00000024330	cpsf2	96	96.433	ENSATEG00000017644	cpsf2	99	95.973	Anabas_testudineus
ENSSLDG00000024330	cpsf2	100	85.714	ENSAPLG00000006330	CPSF2	100	85.714	Anas_platyrhynchos
ENSSLDG00000024330	cpsf2	100	84.791	ENSACAG00000009245	CPSF2	100	84.791	Anolis_carolinensis
ENSSLDG00000024330	cpsf2	100	85.805	ENSANAG00000022915	CPSF2	100	85.805	Aotus_nancymaae
ENSSLDG00000024330	cpsf2	100	89.987	ENSAMXG00000018696	cpsf2	100	89.987	Astyanax_mexicanus
ENSSLDG00000024330	cpsf2	100	85.805	ENSBTAG00000010227	CPSF2	100	85.805	Bos_taurus
ENSSLDG00000024330	cpsf2	100	42.136	WBGene00017313	cpsf-2	100	42.019	Caenorhabditis_elegans
ENSSLDG00000024330	cpsf2	100	85.805	ENSCJAG00000018069	CPSF2	100	85.805	Callithrix_jacchus
ENSSLDG00000024330	cpsf2	100	85.805	ENSCAFG00000010909	CPSF2	100	85.805	Canis_familiaris
ENSSLDG00000024330	cpsf2	100	85.805	ENSCAFG00020020670	CPSF2	100	85.805	Canis_lupus_dingo
ENSSLDG00000024330	cpsf2	100	85.805	ENSCHIG00000023848	CPSF2	100	85.805	Capra_hircus
ENSSLDG00000024330	cpsf2	100	85.678	ENSTSYG00000009036	CPSF2	100	85.678	Carlito_syrichta
ENSSLDG00000024330	cpsf2	100	85.805	ENSCPOG00000010899	CPSF2	100	85.805	Cavia_porcellus
ENSSLDG00000024330	cpsf2	100	85.805	ENSCCAG00000028088	CPSF2	100	85.805	Cebus_capucinus
ENSSLDG00000024330	cpsf2	100	85.805	ENSCATG00000030132	CPSF2	100	85.805	Cercocebus_atys
ENSSLDG00000024330	cpsf2	100	85.805	ENSCLAG00000012404	CPSF2	100	85.805	Chinchilla_lanigera
ENSSLDG00000024330	cpsf2	100	85.805	ENSCSAG00000011300	CPSF2	100	85.805	Chlorocebus_sabaeus
ENSSLDG00000024330	cpsf2	100	80.228	ENSCHOG00000012904	CPSF2	100	80.228	Choloepus_hoffmanni
ENSSLDG00000024330	cpsf2	100	85.551	ENSCPBG00000008766	CPSF2	97	85.551	Chrysemys_picta_bellii
ENSSLDG00000024330	cpsf2	100	52.919	ENSCING00000007881	-	100	53.043	Ciona_intestinalis
ENSSLDG00000024330	cpsf2	94	85.811	ENSCANG00000041651	CPSF2	100	85.792	Colobus_angolensis_palliatus
ENSSLDG00000024330	cpsf2	100	85.298	ENSCGRG00001006901	Cpsf2	100	85.298	Cricetulus_griseus_chok1gshd
ENSSLDG00000024330	cpsf2	100	85.298	ENSCGRG00000012416	Cpsf2	100	85.298	Cricetulus_griseus_crigri
ENSSLDG00000024330	cpsf2	100	94.162	ENSCSEG00000004116	cpsf2	100	94.162	Cynoglossus_semilaevis
ENSSLDG00000024330	cpsf2	100	94.790	ENSCVAG00000000095	cpsf2	100	94.790	Cyprinodon_variegatus
ENSSLDG00000024330	cpsf2	100	88.354	ENSDARG00000028971	cpsf2	100	88.354	Danio_rerio
ENSSLDG00000024330	cpsf2	100	85.805	ENSDNOG00000042757	CPSF2	100	85.805	Dasypus_novemcinctus
ENSSLDG00000024330	cpsf2	100	85.805	ENSDORG00000013709	Cpsf2	100	85.805	Dipodomys_ordii
ENSSLDG00000024330	cpsf2	100	53.408	FBgn0027873	Cpsf100	100	52.580	Drosophila_melanogaster
ENSSLDG00000024330	cpsf2	100	78.228	ENSETEG00000012123	CPSF2	100	78.228	Echinops_telfairi
ENSSLDG00000024330	cpsf2	52	75.550	ENSEBUG00000012098	cpsf2	93	75.550	Eptatretus_burgeri
ENSSLDG00000024330	cpsf2	89	90.785	ENSEASG00005021193	CPSF2	100	90.785	Equus_asinus_asinus
ENSSLDG00000024330	cpsf2	100	85.678	ENSECAG00000023935	CPSF2	100	85.678	Equus_caballus
ENSSLDG00000024330	cpsf2	100	89.599	ENSELUG00000008442	cpsf2	100	89.599	Esox_lucius
ENSSLDG00000024330	cpsf2	100	85.678	ENSFCAG00000007886	CPSF2	100	85.678	Felis_catus
ENSSLDG00000024330	cpsf2	100	85.932	ENSFALG00000002412	CPSF2	100	85.932	Ficedula_albicollis
ENSSLDG00000024330	cpsf2	100	85.678	ENSFDAG00000006327	CPSF2	100	85.678	Fukomys_damarensis
ENSSLDG00000024330	cpsf2	96	92.529	ENSFHEG00000015465	cpsf2	98	93.447	Fundulus_heteroclitus
ENSSLDG00000024330	cpsf2	100	90.025	ENSGMOG00000008761	cpsf2	100	90.025	Gadus_morhua
ENSSLDG00000024330	cpsf2	100	85.914	ENSGALG00000010783	CPSF2	100	86.312	Gallus_gallus
ENSSLDG00000024330	cpsf2	100	95.426	ENSGAFG00000001407	cpsf2	100	95.426	Gambusia_affinis
ENSSLDG00000024330	cpsf2	100	95.934	ENSGACG00000008418	cpsf2	100	95.934	Gasterosteus_aculeatus
ENSSLDG00000024330	cpsf2	100	85.425	ENSGAGG00000008287	CPSF2	100	85.425	Gopherus_agassizii
ENSSLDG00000024330	cpsf2	100	85.678	ENSGGOG00000011799	CPSF2	100	85.678	Gorilla_gorilla
ENSSLDG00000024330	cpsf2	100	94.917	ENSHBUG00000023466	cpsf2	100	94.917	Haplochromis_burtoni
ENSSLDG00000024330	cpsf2	100	85.805	ENSHGLG00000018311	CPSF2	100	85.805	Heterocephalus_glaber_female
ENSSLDG00000024330	cpsf2	100	85.805	ENSHGLG00100016460	CPSF2	100	85.805	Heterocephalus_glaber_male
ENSSLDG00000024330	cpsf2	100	93.774	ENSHCOG00000019527	cpsf2	98	93.774	Hippocampus_comes
ENSSLDG00000024330	cpsf2	100	90.748	ENSIPUG00000020857	cpsf2	100	90.748	Ictalurus_punctatus
ENSSLDG00000024330	cpsf2	100	85.805	ENSSTOG00000009528	CPSF2	100	85.805	Ictidomys_tridecemlineatus
ENSSLDG00000024330	cpsf2	100	85.551	ENSJJAG00000017925	Cpsf2	100	85.551	Jaculus_jaculus
ENSSLDG00000024330	cpsf2	100	94.663	ENSKMAG00000019429	cpsf2	100	94.663	Kryptolebias_marmoratus
ENSSLDG00000024330	cpsf2	95	95.442	ENSLBEG00000011585	cpsf2	100	95.442	Labrus_bergylta
ENSSLDG00000024330	cpsf2	100	84.137	ENSLACG00000019024	CPSF2	100	84.411	Latimeria_chalumnae
ENSSLDG00000024330	cpsf2	100	88.608	ENSLOCG00000014102	cpsf2	100	88.608	Lepisosteus_oculatus
ENSSLDG00000024330	cpsf2	100	85.461	ENSLAFG00000004891	CPSF2	100	85.461	Loxodonta_africana
ENSSLDG00000024330	cpsf2	100	85.805	ENSMFAG00000041212	CPSF2	100	85.805	Macaca_fascicularis
ENSSLDG00000024330	cpsf2	100	85.805	ENSMMUG00000000699	CPSF2	100	85.805	Macaca_mulatta
ENSSLDG00000024330	cpsf2	100	85.805	ENSMNEG00000031584	CPSF2	100	85.805	Macaca_nemestrina
ENSSLDG00000024330	cpsf2	100	85.805	ENSMLEG00000029394	CPSF2	100	85.805	Mandrillus_leucophaeus
ENSSLDG00000024330	cpsf2	100	97.205	ENSMAMG00000004235	cpsf2	100	97.205	Mastacembelus_armatus
ENSSLDG00000024330	cpsf2	100	95.044	ENSMZEG00005001769	cpsf2	100	95.044	Maylandia_zebra
ENSSLDG00000024330	cpsf2	100	85.678	ENSMGAG00000013122	CPSF2	100	86.076	Meleagris_gallopavo
ENSSLDG00000024330	cpsf2	100	85.298	ENSMAUG00000015160	Cpsf2	100	85.298	Mesocricetus_auratus
ENSSLDG00000024330	cpsf2	100	85.805	ENSMICG00000016441	CPSF2	100	85.805	Microcebus_murinus
ENSSLDG00000024330	cpsf2	100	85.298	ENSMOCG00000015372	Cpsf2	100	85.298	Microtus_ochrogaster
ENSSLDG00000024330	cpsf2	100	90.597	ENSMMOG00000015590	cpsf2	100	90.597	Mola_mola
ENSSLDG00000024330	cpsf2	100	85.805	ENSMODG00000002042	CPSF2	100	85.805	Monodelphis_domestica
ENSSLDG00000024330	cpsf2	100	93.266	ENSMALG00000022275	cpsf2	100	93.266	Monopterus_albus
ENSSLDG00000024330	cpsf2	100	85.298	ENSMUSG00000041781	Cpsf2	100	85.298	Mus_musculus
ENSSLDG00000024330	cpsf2	100	85.425	MGP_PahariEiJ_G0029791	Cpsf2	100	85.425	Mus_pahari
ENSSLDG00000024330	cpsf2	100	85.298	MGP_SPRETEiJ_G0018877	Cpsf2	100	85.298	Mus_spretus
ENSSLDG00000024330	cpsf2	100	85.678	ENSMPUG00000007617	CPSF2	98	85.678	Mustela_putorius_furo
ENSSLDG00000024330	cpsf2	100	85.425	ENSMLUG00000005570	CPSF2	100	85.425	Myotis_lucifugus
ENSSLDG00000024330	cpsf2	100	85.551	ENSNGAG00000020312	Cpsf2	100	85.551	Nannospalax_galili
ENSSLDG00000024330	cpsf2	100	95.426	ENSNBRG00000022402	cpsf2	100	95.426	Neolamprologus_brichardi
ENSSLDG00000024330	cpsf2	100	84.918	ENSNLEG00000017132	CPSF2	100	84.918	Nomascus_leucogenys
ENSSLDG00000024330	cpsf2	91	93.528	ENSMEUG00000008138	CPSF2	91	93.528	Notamacropus_eugenii
ENSSLDG00000024330	cpsf2	94	81.572	ENSOPRG00000008484	-	100	81.572	Ochotona_princeps
ENSSLDG00000024330	cpsf2	100	85.551	ENSODEG00000008682	CPSF2	100	85.551	Octodon_degus
ENSSLDG00000024330	cpsf2	100	95.426	ENSONIG00000005901	cpsf2	100	95.426	Oreochromis_niloticus
ENSSLDG00000024330	cpsf2	100	85.805	ENSOANG00000003822	CPSF2	100	85.805	Ornithorhynchus_anatinus
ENSSLDG00000024330	cpsf2	100	85.678	ENSOCUG00000005713	CPSF2	100	85.678	Oryctolagus_cuniculus
ENSSLDG00000024330	cpsf2	100	88.183	ENSORLG00000011628	cpsf2	100	88.183	Oryzias_latipes
ENSSLDG00000024330	cpsf2	100	94.028	ENSORLG00020016980	cpsf2	100	94.028	Oryzias_latipes_hni
ENSSLDG00000024330	cpsf2	100	94.028	ENSORLG00015011910	cpsf2	100	94.028	Oryzias_latipes_hsok
ENSSLDG00000024330	cpsf2	100	94.162	ENSOMEG00000022876	cpsf2	100	94.162	Oryzias_melastigma
ENSSLDG00000024330	cpsf2	100	82.807	ENSOARG00000012889	CPSF2	100	82.807	Ovis_aries
ENSSLDG00000024330	cpsf2	100	85.678	ENSPPAG00000039666	CPSF2	100	85.678	Pan_paniscus
ENSSLDG00000024330	cpsf2	99	85.660	ENSPPRG00000010869	CPSF2	100	85.660	Panthera_pardus
ENSSLDG00000024330	cpsf2	100	85.678	ENSPTIG00000021202	CPSF2	100	85.678	Panthera_tigris_altaica
ENSSLDG00000024330	cpsf2	100	85.678	ENSPTRG00000006651	CPSF2	100	85.678	Pan_troglodytes
ENSSLDG00000024330	cpsf2	100	85.805	ENSPANG00000017417	CPSF2	100	85.805	Papio_anubis
ENSSLDG00000024330	cpsf2	100	84.791	ENSPKIG00000021453	cpsf2	100	84.791	Paramormyrops_kingsleyae
ENSSLDG00000024330	cpsf2	100	85.044	ENSPSIG00000006289	CPSF2	100	85.044	Pelodiscus_sinensis
ENSSLDG00000024330	cpsf2	76	89.667	ENSPMGG00000002511	cpsf2	99	89.667	Periophthalmus_magnuspinnatus
ENSSLDG00000024330	cpsf2	100	85.425	ENSPEMG00000007917	Cpsf2	100	85.425	Peromyscus_maniculatus_bairdii
ENSSLDG00000024330	cpsf2	100	72.898	ENSPMAG00000006205	cpsf2	100	72.431	Petromyzon_marinus
ENSSLDG00000024330	cpsf2	100	85.805	ENSPCIG00000011393	CPSF2	100	85.805	Phascolarctos_cinereus
ENSSLDG00000024330	cpsf2	100	95.172	ENSPFOG00000018648	cpsf2	100	95.172	Poecilia_formosa
ENSSLDG00000024330	cpsf2	100	95.172	ENSPLAG00000019199	cpsf2	99	95.172	Poecilia_latipinna
ENSSLDG00000024330	cpsf2	96	95.244	ENSPMEG00000012100	cpsf2	100	94.906	Poecilia_mexicana
ENSSLDG00000024330	cpsf2	100	94.917	ENSPREG00000008960	cpsf2	100	94.917	Poecilia_reticulata
ENSSLDG00000024330	cpsf2	64	81.511	ENSPPYG00000029685	-	100	81.511	Pongo_abelii
ENSSLDG00000024330	cpsf2	100	85.678	ENSPCAG00000012477	CPSF2	100	85.678	Procavia_capensis
ENSSLDG00000024330	cpsf2	100	85.805	ENSPCOG00000026387	CPSF2	100	85.805	Propithecus_coquereli
ENSSLDG00000024330	cpsf2	64	91.327	ENSPVAG00000004223	CPSF2	65	91.327	Pteropus_vampyrus
ENSSLDG00000024330	cpsf2	100	94.797	ENSPNYG00000023356	cpsf2	100	94.797	Pundamilia_nyererei
ENSSLDG00000024330	cpsf2	100	91.508	ENSPNAG00000001849	cpsf2	100	91.508	Pygocentrus_nattereri
ENSSLDG00000024330	cpsf2	100	85.298	ENSRNOG00000005733	Cpsf2	100	85.298	Rattus_norvegicus
ENSSLDG00000024330	cpsf2	100	85.805	ENSRBIG00000044792	CPSF2	100	85.805	Rhinopithecus_bieti
ENSSLDG00000024330	cpsf2	100	85.805	ENSRROG00000034875	CPSF2	100	85.805	Rhinopithecus_roxellana
ENSSLDG00000024330	cpsf2	100	85.805	ENSSBOG00000024571	CPSF2	100	85.805	Saimiri_boliviensis_boliviensis
ENSSLDG00000024330	cpsf2	100	85.805	ENSSHAG00000010458	CPSF2	100	85.805	Sarcophilus_harrisii
ENSSLDG00000024330	cpsf2	100	91.508	ENSSFOG00015002117	cpsf2	100	91.635	Scleropages_formosus
ENSSLDG00000024330	cpsf2	100	95.178	ENSSMAG00000002001	cpsf2	100	95.939	Scophthalmus_maximus
ENSSLDG00000024330	cpsf2	100	99.365	ENSSDUG00000004084	cpsf2	100	99.365	Seriola_dumerili
ENSSLDG00000024330	cpsf2	58	95.050	ENSSARG00000009784	-	63	95.050	Sorex_araneus
ENSSLDG00000024330	cpsf2	100	85.425	ENSSPUG00000013485	CPSF2	100	85.425	Sphenodon_punctatus
ENSSLDG00000024330	cpsf2	100	96.696	ENSSPAG00000013284	cpsf2	100	96.696	Stegastes_partitus
ENSSLDG00000024330	cpsf2	100	85.551	ENSSSCG00000002447	CPSF2	100	85.551	Sus_scrofa
ENSSLDG00000024330	cpsf2	100	86.058	ENSTGUG00000012571	-	100	86.058	Taeniopygia_guttata
ENSSLDG00000024330	cpsf2	100	94.536	ENSTRUG00000003742	cpsf2	100	94.536	Takifugu_rubripes
ENSSLDG00000024330	cpsf2	100	93.409	ENSTNIG00000012228	cpsf2	100	94.297	Tetraodon_nigroviridis
ENSSLDG00000024330	cpsf2	91	82.902	ENSTBEG00000004530	CPSF2	94	82.902	Tupaia_belangeri
ENSSLDG00000024330	cpsf2	88	87.500	ENSTTRG00000008697	CPSF2	88	87.500	Tursiops_truncatus
ENSSLDG00000024330	cpsf2	100	85.805	ENSUAMG00000028071	CPSF2	100	85.805	Ursus_americanus
ENSSLDG00000024330	cpsf2	100	85.805	ENSUMAG00000005029	CPSF2	100	85.805	Ursus_maritimus
ENSSLDG00000024330	cpsf2	99	85.660	ENSVPAG00000003503	CPSF2	100	85.660	Vicugna_pacos
ENSSLDG00000024330	cpsf2	100	85.805	ENSVVUG00000024642	CPSF2	100	85.805	Vulpes_vulpes
ENSSLDG00000024330	cpsf2	100	84.918	ENSXETG00000010289	cpsf2	100	84.918	Xenopus_tropicalis
ENSSLDG00000024330	cpsf2	100	94.917	ENSXCOG00000001764	cpsf2	100	94.917	Xiphophorus_couchianus
ENSSLDG00000024330	cpsf2	100	95.426	ENSXMAG00000017048	cpsf2	100	95.426	Xiphophorus_maculatus