EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSLDG00000024486 (Gene tree)
Gene ID
-
Gene Symbol
smarca4a
Alias
brahma-related gene 1|brg1|smarca2|smarca4|wu:fb51a08|yng|young
Full Name
SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 4
Gene Type
protein_coding
Species
Seriola_lalandi_dorsalis
Status
putative
Strand
Minus strand
Length
15228 bases
Position
chrPEQF01099404.1:473713-488940
Accession
111673753
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSLDP00000031965ResIIIPF04851.154.6e-0911
ENSSLDP00000031923ResIIIPF04851.155.6e-0911
ENSSLDP00000031965BRKPF07533.165e-1711
ENSSLDP00000031923BRKPF07533.165.9e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSLDT00000032833-6570XM_023431608ENSSLDP000000319231643 (aa)XP_023287376UPI000C6FABBD
ENSSLDT00000032876-4224-ENSSLDP000000319651407 (aa)--
Gene Model
Click here to download ENSSLDG00000024486's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000024486's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSLDG00000024486smarca4a10072.045ENSSLDG00000025449SMARCA29369.384
ENSSLDG00000024486smarca4a5333.998ENSSLDG00000018960hells5449.029
ENSSLDG00000024486smarca4a10085.635ENSSLDG00000023663-9786.887
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSLDG00000024486smarca4a10086.607ENSG00000127616SMARCA49995.652Homo_sapiens
ENSSLDG00000024486smarca4a9987.163ENSAPOG00000004542SMARCA49987.757Acanthochromis_polyacanthus
ENSSLDG00000024486smarca4a7794.134ENSAPOG00000003509smarca4a9894.787Acanthochromis_polyacanthus
ENSSLDG00000024486smarca4a10083.411ENSAMEG00000010868SMARCA410083.939Ailuropoda_melanoleuca
ENSSLDG00000024486smarca4a10087.181ENSACIG00000003035-9784.503Amphilophus_citrinellus
ENSSLDG00000024486smarca4a9996.820ENSACIG00000021550smarca4a9996.820Amphilophus_citrinellus
ENSSLDG00000024486smarca4a10097.086ENSAOCG00000019167smarca4a10097.086Amphiprion_ocellaris
ENSSLDG00000024486smarca4a10085.155ENSAOCG00000009450-9785.981Amphiprion_ocellaris
ENSSLDG00000024486smarca4a10084.965ENSAPEG00000023108-9981.974Amphiprion_percula
ENSSLDG00000024486smarca4a10097.228ENSAPEG00000015559smarca4a10097.228Amphiprion_percula
ENSSLDG00000024486smarca4a10096.287ENSATEG00000011524smarca4a10096.287Anabas_testudineus
ENSSLDG00000024486smarca4a10086.099ENSATEG00000001094-9883.898Anabas_testudineus
ENSSLDG00000024486smarca4a9986.561ENSANAG00000036991SMARCA410084.152Aotus_nancymaae
ENSSLDG00000024486smarca4a10093.979ENSACLG00000000163smarca4a9896.350Astatotilapia_calliptera
ENSSLDG00000024486smarca4a10086.969ENSACLG00000008638-9883.546Astatotilapia_calliptera
ENSSLDG00000024486smarca4a10089.141ENSAMXG00000021023smarca4a9885.527Astyanax_mexicanus
ENSSLDG00000024486smarca4a9987.836ENSAMXG00000011238-9687.555Astyanax_mexicanus
ENSSLDG00000024486smarca4a10087.155ENSBTAG00000019220SMARCA49887.081Bos_taurus
ENSSLDG00000024486smarca4a10083.607ENSCJAG00000005936SMARCA410084.152Callithrix_jacchus
ENSSLDG00000024486smarca4a10086.538ENSCAFG00000017584SMARCA410086.775Canis_familiaris
ENSSLDG00000024486smarca4a10086.258ENSCAFG00020024620SMARCA49986.775Canis_lupus_dingo
ENSSLDG00000024486smarca4a10083.697ENSCHIG00000015318SMARCA49883.375Capra_hircus
ENSSLDG00000024486smarca4a10086.671ENSTSYG00000012966SMARCA410087.075Carlito_syrichta
ENSSLDG00000024486smarca4a9983.653ENSCAPG00000015932SMARCA49589.469Cavia_aperea
ENSSLDG00000024486smarca4a10086.538ENSCPOG00000015549SMARCA410086.715Cavia_porcellus
ENSSLDG00000024486smarca4a10083.918ENSCCAG00000031660SMARCA49983.683Cebus_capucinus
ENSSLDG00000024486smarca4a10086.607ENSCATG00000029530SMARCA410086.731Cercocebus_atys
ENSSLDG00000024486smarca4a10087.171ENSCLAG00000011946SMARCA410087.189Chinchilla_lanigera
ENSSLDG00000024486smarca4a10086.607ENSCPBG00000009994SMARCA410086.276Chrysemys_picta_bellii
ENSSLDG00000024486smarca4a10086.607ENSCANG00000036013SMARCA410086.731Colobus_angolensis_palliatus
ENSSLDG00000024486smarca4a10086.332ENSCGRG00001016732Smarca410086.655Cricetulus_griseus_chok1gshd
ENSSLDG00000024486smarca4a10086.332ENSCGRG00000017242Smarca410086.655Cricetulus_griseus_crigri
ENSSLDG00000024486smarca4a10095.076ENSCSEG00000014771smarca4a10095.076Cynoglossus_semilaevis
ENSSLDG00000024486smarca4a9993.038ENSCVAG00000006979smarca4a9993.777Cyprinodon_variegatus
ENSSLDG00000024486smarca4a10085.872ENSCVAG00000003018-9883.946Cyprinodon_variegatus
ENSSLDG00000024486smarca4a10089.595ENSDARG00000077226smarca4a10089.897Danio_rerio
ENSSLDG00000024486smarca4a9683.167ENSDARG00000104339SMARCA49484.106Danio_rerio
ENSSLDG00000024486smarca4a9983.942ENSDNOG00000048847SMARCA49089.755Dasypus_novemcinctus
ENSSLDG00000024486smarca4a9481.154ENSDORG00000002544Smarca49578.919Dipodomys_ordii
ENSSLDG00000024486smarca4a9975.051ENSETEG00000013361SMARCA49476.830Echinops_telfairi
ENSSLDG00000024486smarca4a10086.594ENSEASG00005006167SMARCA410084.743Equus_asinus_asinus
ENSSLDG00000024486smarca4a10086.332ENSECAG00000008334SMARCA410086.594Equus_caballus
ENSSLDG00000024486smarca4a10078.491ENSELUG00000023232-9778.510Esox_lucius
ENSSLDG00000024486smarca4a10092.357ENSELUG00000010247smarca4a10091.212Esox_lucius
ENSSLDG00000024486smarca4a10086.292ENSFCAG00000004894SMARCA410086.558Felis_catus
ENSSLDG00000024486smarca4a9683.032ENSFALG00000004208SMARCA49284.263Ficedula_albicollis
ENSSLDG00000024486smarca4a9986.323ENSFDAG00000012237SMARCA49786.711Fukomys_damarensis
ENSSLDG00000024486smarca4a10085.518ENSFHEG00000007902-9883.762Fundulus_heteroclitus
ENSSLDG00000024486smarca4a10090.405ENSFHEG00000010182smarca4a10092.590Fundulus_heteroclitus
ENSSLDG00000024486smarca4a8893.220ENSGMOG00000002649smarca4a9491.071Gadus_morhua
ENSSLDG00000024486smarca4a9083.004ENSGMOG00000005756-9081.116Gadus_morhua
ENSSLDG00000024486smarca4a8185.798ENSGALG00000047145SMARCA410086.556Gallus_gallus
ENSSLDG00000024486smarca4a9191.661ENSGAFG00000014900smarca4a9993.124Gambusia_affinis
ENSSLDG00000024486smarca4a10084.099ENSGAFG00000008827-9881.300Gambusia_affinis
ENSSLDG00000024486smarca4a9980.432ENSGACG00000016033-9979.964Gasterosteus_aculeatus
ENSSLDG00000024486smarca4a10093.996ENSGACG00000006691smarca4a10093.996Gasterosteus_aculeatus
ENSSLDG00000024486smarca4a10086.855ENSGAGG00000016757SMARCA410086.493Gopherus_agassizii
ENSSLDG00000024486smarca4a10086.607ENSGGOG00000009882SMARCA410086.731Gorilla_gorilla
ENSSLDG00000024486smarca4a10087.323ENSHBUG00000005447-9884.120Haplochromis_burtoni
ENSSLDG00000024486smarca4a10097.263ENSHBUG00000021172smarca4a10097.263Haplochromis_burtoni
ENSSLDG00000024486smarca4a10085.714ENSHGLG00000010519SMARCA410086.109Heterocephalus_glaber_female
ENSSLDG00000024486smarca4a10086.068ENSHGLG00100013774SMARCA410085.766Heterocephalus_glaber_male
ENSSLDG00000024486smarca4a10092.418ENSHCOG00000009510smarca4a9695.332Hippocampus_comes
ENSSLDG00000024486smarca4a9884.768ENSIPUG00000016346-9784.639Ictalurus_punctatus
ENSSLDG00000024486smarca4a10089.567ENSIPUG00000006107smarca4a10089.709Ictalurus_punctatus
ENSSLDG00000024486smarca4a10086.401ENSSTOG00000007939SMARCA410086.594Ictidomys_tridecemlineatus
ENSSLDG00000024486smarca4a10085.740ENSJJAG00000012877Smarca410085.621Jaculus_jaculus
ENSSLDG00000024486smarca4a10085.685ENSKMAG00000019518-9886.078Kryptolebias_marmoratus
ENSSLDG00000024486smarca4a10093.674ENSKMAG00000011931smarca4a10093.978Kryptolebias_marmoratus
ENSSLDG00000024486smarca4a9976.912ENSLBEG00000020655-9871.985Labrus_bergylta
ENSSLDG00000024486smarca4a10092.897ENSLBEG00000017383smarca4a9791.083Labrus_bergylta
ENSSLDG00000024486smarca4a5679.808ENSLACG00000015309SMARCA410081.829Latimeria_chalumnae
ENSSLDG00000024486smarca4a10085.783ENSLOCG00000007820smarca4a9986.278Lepisosteus_oculatus
ENSSLDG00000024486smarca4a10086.745ENSLAFG00000001433SMARCA410086.558Loxodonta_africana
ENSSLDG00000024486smarca4a10085.397ENSMFAG00000032146SMARCA49986.731Macaca_fascicularis
ENSSLDG00000024486smarca4a10086.607ENSMMUG00000012042SMARCA410086.731Macaca_mulatta
ENSSLDG00000024486smarca4a10086.589ENSMNEG00000028512SMARCA410086.715Macaca_nemestrina
ENSSLDG00000024486smarca4a10086.607ENSMLEG00000034976SMARCA410086.574Mandrillus_leucophaeus
ENSSLDG00000024486smarca4a10084.966ENSMAMG00000002841-9886.242Mastacembelus_armatus
ENSSLDG00000024486smarca4a10096.835ENSMAMG00000009256smarca4a10096.835Mastacembelus_armatus
ENSSLDG00000024486smarca4a10084.388ENSMZEG00005023861-9882.432Maylandia_zebra
ENSSLDG00000024486smarca4a10096.413ENSMZEG00005003889smarca4a10096.413Maylandia_zebra
ENSSLDG00000024486smarca4a10086.377ENSMAUG00000020731Smarca410086.377Mesocricetus_auratus
ENSSLDG00000024486smarca4a10086.429ENSMICG00000009806SMARCA410086.618Microcebus_murinus
ENSSLDG00000024486smarca4a10086.155ENSMOCG00000022209Smarca410086.498Microtus_ochrogaster
ENSSLDG00000024486smarca4a10090.971ENSMMOG00000007571smarca4a10093.664Mola_mola
ENSSLDG00000024486smarca4a10085.188ENSMMOG00000008466-9881.192Mola_mola
ENSSLDG00000024486smarca4a10086.423ENSMODG00000006287SMARCA410086.244Monodelphis_domestica
ENSSLDG00000024486smarca4a10095.988ENSMALG00000003388smarca4a10095.988Monopterus_albus
ENSSLDG00000024486smarca4a9986.190ENSMALG00000021534-9686.618Monopterus_albus
ENSSLDG00000024486smarca4a10086.401MGP_CAROLIEiJ_G0031879Smarca410087.165Mus_caroli
ENSSLDG00000024486smarca4a10086.401ENSMUSG00000032187Smarca410086.767Mus_musculus
ENSSLDG00000024486smarca4a10086.897MGP_PahariEiJ_G0014745Smarca410087.658Mus_pahari
ENSSLDG00000024486smarca4a10086.401MGP_SPRETEiJ_G0033003Smarca410087.165Mus_spretus
ENSSLDG00000024486smarca4a10086.470ENSMPUG00000005711SMARCA410086.715Mustela_putorius_furo
ENSSLDG00000024486smarca4a10086.882ENSMLUG00000004491-10086.836Myotis_lucifugus
ENSSLDG00000024486smarca4a10086.915ENSNGAG00000021852Smarca410086.743Nannospalax_galili
ENSSLDG00000024486smarca4a9987.527ENSNBRG00000018865-9986.978Neolamprologus_brichardi
ENSSLDG00000024486smarca4a10096.449ENSNBRG00000011457smarca4a9892.506Neolamprologus_brichardi
ENSSLDG00000024486smarca4a9986.128ENSNLEG00000012389SMARCA49484.137Nomascus_leucogenys
ENSSLDG00000024486smarca4a9196.552ENSOPRG00000000885-7996.552Ochotona_princeps
ENSSLDG00000024486smarca4a10086.815ENSODEG00000017127SMARCA410085.255Octodon_degus
ENSSLDG00000024486smarca4a10085.092ENSONIG00000018040-9982.217Oreochromis_niloticus
ENSSLDG00000024486smarca4a10096.715ENSONIG00000008196smarca4a10096.715Oreochromis_niloticus
ENSSLDG00000024486smarca4a9982.320ENSOCUG00000001787SMARCA49880.884Oryctolagus_cuniculus
ENSSLDG00000024486smarca4a10093.127ENSORLG00000015452smarca4a10093.187Oryzias_latipes
ENSSLDG00000024486smarca4a9684.009ENSORLG00000003955-9584.220Oryzias_latipes
ENSSLDG00000024486smarca4a10092.762ENSORLG00020004611smarca4a10093.187Oryzias_latipes_hni
ENSSLDG00000024486smarca4a9684.168ENSORLG00020009728-9583.980Oryzias_latipes_hni
ENSSLDG00000024486smarca4a9984.258ENSORLG00015007739-9583.907Oryzias_latipes_hsok
ENSSLDG00000024486smarca4a10092.762ENSORLG00015016560smarca4a10093.187Oryzias_latipes_hsok
ENSSLDG00000024486smarca4a9784.473ENSOMEG00000016626-9584.355Oryzias_melastigma
ENSSLDG00000024486smarca4a10093.609ENSOMEG00000007486smarca4a10093.974Oryzias_melastigma
ENSSLDG00000024486smarca4a9985.185ENSOGAG00000016148SMARCA410085.195Otolemur_garnettii
ENSSLDG00000024486smarca4a10086.749ENSOARG00000017454SMARCA49886.708Ovis_aries
ENSSLDG00000024486smarca4a10086.607ENSPPAG00000043191SMARCA410086.731Pan_paniscus
ENSSLDG00000024486smarca4a10086.292ENSPPRG00000000064SMARCA410086.558Panthera_pardus
ENSSLDG00000024486smarca4a7986.662ENSPTIG00000017447SMARCA410082.036Panthera_tigris_altaica
ENSSLDG00000024486smarca4a10086.607ENSPTRG00000010488SMARCA410086.731Pan_troglodytes
ENSSLDG00000024486smarca4a10085.499ENSPANG00000011042SMARCA49986.836Papio_anubis
ENSSLDG00000024486smarca4a10089.703ENSPKIG00000007770SMARCA410089.758Paramormyrops_kingsleyae
ENSSLDG00000024486smarca4a10085.931ENSPKIG00000010087-9886.256Paramormyrops_kingsleyae
ENSSLDG00000024486smarca4a10082.437ENSPSIG00000005547SMARCA410082.325Pelodiscus_sinensis
ENSSLDG00000024486smarca4a10086.223ENSPEMG00000020389Smarca410086.558Peromyscus_maniculatus_bairdii
ENSSLDG00000024486smarca4a10086.942ENSPCIG00000017138SMARCA410087.054Phascolarctos_cinereus
ENSSLDG00000024486smarca4a10091.079ENSPFOG00000007892smarca4a10092.405Poecilia_formosa
ENSSLDG00000024486smarca4a10084.735ENSPFOG00000012930-9984.735Poecilia_formosa
ENSSLDG00000024486smarca4a9985.292ENSPLAG00000018616-9885.609Poecilia_latipinna
ENSSLDG00000024486smarca4a10091.079ENSPLAG00000014294smarca4a10092.405Poecilia_latipinna
ENSSLDG00000024486smarca4a10087.165ENSPMEG00000008929-9884.071Poecilia_mexicana
ENSSLDG00000024486smarca4a10088.177ENSPMEG00000003725smarca4a9792.649Poecilia_mexicana
ENSSLDG00000024486smarca4a10090.805ENSPREG00000014608smarca4a10091.767Poecilia_reticulata
ENSSLDG00000024486smarca4a10083.487ENSPREG00000014823-9785.213Poecilia_reticulata
ENSSLDG00000024486smarca4a10085.621ENSPPYG00000009568SMARCA410086.055Pongo_abelii
ENSSLDG00000024486smarca4a7986.093ENSPCAG00000014054SMARCA47591.406Procavia_capensis
ENSSLDG00000024486smarca4a10086.361ENSPCOG00000023011SMARCA410086.498Propithecus_coquereli
ENSSLDG00000024486smarca4a9682.944ENSPVAG00000007787SMARCA49682.226Pteropus_vampyrus
ENSSLDG00000024486smarca4a10086.898ENSPNYG00000023995-9884.056Pundamilia_nyererei
ENSSLDG00000024486smarca4a10095.312ENSPNYG00000000717smarca4a9896.537Pundamilia_nyererei
ENSSLDG00000024486smarca4a9986.563ENSPNAG00000006636-9386.931Pygocentrus_nattereri
ENSSLDG00000024486smarca4a10088.127ENSPNAG00000024136smarca4a9785.821Pygocentrus_nattereri
ENSSLDG00000024486smarca4a10086.470ENSRNOG00000009271Smarca410086.767Rattus_norvegicus
ENSSLDG00000024486smarca4a10085.383ENSRBIG00000038696SMARCA49986.671Rhinopithecus_bieti
ENSSLDG00000024486smarca4a10086.607ENSRROG00000045509SMARCA410086.671Rhinopithecus_roxellana
ENSSLDG00000024486smarca4a10086.607ENSSBOG00000026896SMARCA49886.663Saimiri_boliviensis_boliviensis
ENSSLDG00000024486smarca4a10087.010ENSSHAG00000001642SMARCA410087.054Sarcophilus_harrisii
ENSSLDG00000024486smarca4a9685.007ENSSFOG00015009921-9783.520Scleropages_formosus
ENSSLDG00000024486smarca4a10092.422ENSSFOG00015013823smarca410090.617Scleropages_formosus
ENSSLDG00000024486smarca4a10096.596ENSSMAG00000003200smarca4a10096.596Scophthalmus_maximus
ENSSLDG00000024486smarca4a10082.656ENSSMAG00000014082-9982.798Scophthalmus_maximus
ENSSLDG00000024486smarca4a10091.889ENSSDUG00000017298smarca4a10092.615Seriola_dumerili
ENSSLDG00000024486smarca4a10085.665ENSSDUG00000005388-9883.303Seriola_dumerili
ENSSLDG00000024486smarca4a6296.894ENSSARG00000013477SMARCA48196.894Sorex_araneus
ENSSLDG00000024486smarca4a10082.912ENSSPUG00000004558SMARCA49883.969Sphenodon_punctatus
ENSSLDG00000024486smarca4a10098.235ENSSPAG00000004248smarca4a10098.235Stegastes_partitus
ENSSLDG00000024486smarca4a10087.181ENSSPAG00000012533-9982.377Stegastes_partitus
ENSSLDG00000024486smarca4a10086.703ENSSSCG00000013629SMARCA410086.739Sus_scrofa
ENSSLDG00000024486smarca4a5983.986ENSTGUG00000015488-9983.746Taeniopygia_guttata
ENSSLDG00000024486smarca4a9981.574ENSTRUG00000001378SMARCA49882.264Takifugu_rubripes
ENSSLDG00000024486smarca4a10089.979ENSTRUG00000004885smarca4a10089.699Takifugu_rubripes
ENSSLDG00000024486smarca4a10083.242ENSTNIG00000004536SMARCA49982.887Tetraodon_nigroviridis
ENSSLDG00000024486smarca4a7893.089ENSTNIG00000004859-9793.089Tetraodon_nigroviridis
ENSSLDG00000024486smarca4a53100.000ENSTBEG00000000707-52100.000Tupaia_belangeri
ENSSLDG00000024486smarca4a10084.827ENSTTRG00000009519SMARCA410084.648Tursiops_truncatus
ENSSLDG00000024486smarca4a10086.538ENSUAMG00000014661SMARCA410086.775Ursus_americanus
ENSSLDG00000024486smarca4a10086.625ENSUMAG00000022005SMARCA49890.398Ursus_maritimus
ENSSLDG00000024486smarca4a10085.337ENSVVUG00000017820SMARCA49786.775Vulpes_vulpes
ENSSLDG00000024486smarca4a10082.893ENSXETG00000009355smarca410082.194Xenopus_tropicalis
ENSSLDG00000024486smarca4a10086.393ENSXCOG00000013494-9883.026Xiphophorus_couchianus
ENSSLDG00000024486smarca4a10092.042ENSXMAG00000006321smarca4a10092.746Xiphophorus_maculatus
ENSSLDG00000024486smarca4a10085.977ENSXMAG00000007030-9984.666Xiphophorus_maculatus

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