EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000024662 (Gene tree)
Gene ID: -
Gene Symbol: ptrh1
Alias: zgc:112961
Full Name: peptidyl-tRNA hydrolase 1 homolog
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 3124 bases
Position: chrPEQF01099432.1:261687-264810
Accession: 111645705
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000032118	Pept_tRNA_hydro	PF01195.19	2.1e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000033030	-	684	XM_023395005	ENSSLDP00000032118	227 (aa)	XP_023250773	-

Gene Model

Click here to download ENSSLDG00000024662's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000024662's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000024662	ptrh1	81	55.435	ENSG00000187024	PTRH1	75	58.642	Homo_sapiens
ENSSLDG00000024662	ptrh1	93	81.429	ENSAPOG00000010719	ptrh1	73	77.619	Acanthochromis_polyacanthus
ENSSLDG00000024662	ptrh1	93	81.429	ENSAPOG00000003014	-	73	77.619	Acanthochromis_polyacanthus
ENSSLDG00000024662	ptrh1	93	81.429	ENSAPOG00000000947	PTRH1	73	77.619	Acanthochromis_polyacanthus
ENSSLDG00000024662	ptrh1	79	52.778	ENSAMEG00000016791	PTRH1	75	55.901	Ailuropoda_melanoleuca
ENSSLDG00000024662	ptrh1	93	82.160	ENSACIG00000006734	ptrh1	91	80.660	Amphilophus_citrinellus
ENSSLDG00000024662	ptrh1	87	83.333	ENSAOCG00000009725	ptrh1	73	77.619	Amphiprion_ocellaris
ENSSLDG00000024662	ptrh1	87	83.333	ENSAPEG00000020993	ptrh1	73	77.619	Amphiprion_percula
ENSSLDG00000024662	ptrh1	93	81.481	ENSATEG00000010003	ptrh1	77	77.209	Anabas_testudineus
ENSSLDG00000024662	ptrh1	81	58.152	ENSANAG00000025547	PTRH1	75	61.491	Aotus_nancymaae
ENSSLDG00000024662	ptrh1	95	82.569	ENSACLG00000025462	ptrh1	85	83.721	Astatotilapia_calliptera
ENSSLDG00000024662	ptrh1	92	66.346	ENSAMXG00000034117	ptrh1	76	64.423	Astyanax_mexicanus
ENSSLDG00000024662	ptrh1	76	57.558	ENSCJAG00000019841	PTRH1	59	60.748	Callithrix_jacchus
ENSSLDG00000024662	ptrh1	80	56.593	ENSCAFG00000020123	PTRH1	77	57.576	Canis_familiaris
ENSSLDG00000024662	ptrh1	80	56.593	ENSCAFG00020015776	PTRH1	74	57.576	Canis_lupus_dingo
ENSSLDG00000024662	ptrh1	81	59.239	ENSCHIG00000008188	PTRH1	77	60.000	Capra_hircus
ENSSLDG00000024662	ptrh1	60	55.882	ENSCAPG00000015926	PTRH1	84	56.780	Cavia_aperea
ENSSLDG00000024662	ptrh1	80	55.249	ENSCPOG00000023968	PTRH1	75	57.143	Cavia_porcellus
ENSSLDG00000024662	ptrh1	81	56.522	ENSCCAG00000023134	PTRH1	75	59.877	Cebus_capucinus
ENSSLDG00000024662	ptrh1	81	55.978	ENSCATG00000042852	PTRH1	75	59.259	Cercocebus_atys
ENSSLDG00000024662	ptrh1	81	57.609	ENSCLAG00000011155	PTRH1	75	59.627	Chinchilla_lanigera
ENSSLDG00000024662	ptrh1	81	55.978	ENSCSAG00000013748	PTRH1	70	59.259	Chlorocebus_sabaeus
ENSSLDG00000024662	ptrh1	74	55.090	ENSCPBG00000025207	PTRH1	83	57.823	Chrysemys_picta_bellii
ENSSLDG00000024662	ptrh1	81	55.978	ENSCANG00000039856	PTRH1	75	59.259	Colobus_angolensis_palliatus
ENSSLDG00000024662	ptrh1	80	55.801	ENSCGRG00001013108	Ptrh1	80	57.576	Cricetulus_griseus_chok1gshd
ENSSLDG00000024662	ptrh1	80	55.801	ENSCGRG00000016553	Ptrh1	90	57.576	Cricetulus_griseus_crigri
ENSSLDG00000024662	ptrh1	84	77.157	ENSCSEG00000010332	ptrh1	60	82.424	Cynoglossus_semilaevis
ENSSLDG00000024662	ptrh1	93	77.251	ENSCVAG00000010701	ptrh1	76	76.777	Cyprinodon_variegatus
ENSSLDG00000024662	ptrh1	93	64.623	ENSDARG00000098206	ptrh1	90	62.264	Danio_rerio
ENSSLDG00000024662	ptrh1	81	57.065	ENSDNOG00000024194	PTRH1	77	58.788	Dasypus_novemcinctus
ENSSLDG00000024662	ptrh1	81	57.838	ENSDORG00000013321	Ptrh1	75	59.877	Dipodomys_ordii
ENSSLDG00000024662	ptrh1	81	57.065	ENSEASG00005020466	PTRH1	75	59.627	Equus_asinus_asinus
ENSSLDG00000024662	ptrh1	81	57.065	ENSECAG00000007615	PTRH1	60	58.182	Equus_caballus
ENSSLDG00000024662	ptrh1	92	71.154	ENSELUG00000015467	ptrh1	76	70.192	Esox_lucius
ENSSLDG00000024662	ptrh1	79	53.333	ENSFCAG00000001483	PTRH1	76	55.828	Felis_catus
ENSSLDG00000024662	ptrh1	85	49.741	ENSFALG00000001352	PTRH1	81	52.247	Ficedula_albicollis
ENSSLDG00000024662	ptrh1	81	56.522	ENSFDAG00000020077	PTRH1	78	59.627	Fukomys_damarensis
ENSSLDG00000024662	ptrh1	81	85.870	ENSFHEG00000010590	ptrh1	76	81.592	Fundulus_heteroclitus
ENSSLDG00000024662	ptrh1	89	79.208	ENSGAFG00000016215	ptrh1	84	74.752	Gambusia_affinis
ENSSLDG00000024662	ptrh1	73	83.030	ENSGACG00000014682	ptrh1	85	83.030	Gasterosteus_aculeatus
ENSSLDG00000024662	ptrh1	82	56.989	ENSGAGG00000022860	PTRH1	73	59.756	Gopherus_agassizii
ENSSLDG00000024662	ptrh1	81	54.891	ENSGGOG00000011033	PTRH1	75	58.025	Gorilla_gorilla
ENSSLDG00000024662	ptrh1	95	81.651	ENSHBUG00000020824	ptrh1	77	82.791	Haplochromis_burtoni
ENSSLDG00000024662	ptrh1	81	56.522	ENSHGLG00000019147	PTRH1	78	58.385	Heterocephalus_glaber_female
ENSSLDG00000024662	ptrh1	81	53.261	ENSHGLG00100003681	PTRH1	80	54.658	Heterocephalus_glaber_male
ENSSLDG00000024662	ptrh1	81	68.649	ENSHCOG00000014772	ptrh1	66	70.286	Hippocampus_comes
ENSSLDG00000024662	ptrh1	92	63.636	ENSIPUG00000015364	ptrh1	80	62.679	Ictalurus_punctatus
ENSSLDG00000024662	ptrh1	70	60.377	ENSSTOG00000008942	PTRH1	75	60.248	Ictidomys_tridecemlineatus
ENSSLDG00000024662	ptrh1	81	59.239	ENSJJAG00000014338	Ptrh1	80	60.000	Jaculus_jaculus
ENSSLDG00000024662	ptrh1	93	81.132	ENSKMAG00000003253	ptrh1	76	76.415	Kryptolebias_marmoratus
ENSSLDG00000024662	ptrh1	56	86.614	ENSLBEG00000028842	ptrh1	75	86.614	Labrus_bergylta
ENSSLDG00000024662	ptrh1	83	57.672	ENSLACG00000016741	PTRH1	69	61.310	Latimeria_chalumnae
ENSSLDG00000024662	ptrh1	79	51.934	ENSLAFG00000021934	PTRH1	79	54.938	Loxodonta_africana
ENSSLDG00000024662	ptrh1	81	55.978	ENSMFAG00000001700	PTRH1	75	59.259	Macaca_fascicularis
ENSSLDG00000024662	ptrh1	81	55.978	ENSMMUG00000016424	PTRH1	75	59.259	Macaca_mulatta
ENSSLDG00000024662	ptrh1	81	55.978	ENSMNEG00000033061	PTRH1	70	59.259	Macaca_nemestrina
ENSSLDG00000024662	ptrh1	93	77.358	ENSMAMG00000017386	ptrh1	77	76.887	Mastacembelus_armatus
ENSSLDG00000024662	ptrh1	93	82.791	ENSMZEG00005020001	ptrh1	85	82.791	Maylandia_zebra
ENSSLDG00000024662	ptrh1	80	55.249	ENSMAUG00000006266	Ptrh1	80	56.970	Mesocricetus_auratus
ENSSLDG00000024662	ptrh1	78	56.818	ENSMICG00000005611	PTRH1	74	59.877	Microcebus_murinus
ENSSLDG00000024662	ptrh1	80	56.593	ENSMOCG00000013992	Ptrh1	80	58.182	Microtus_ochrogaster
ENSSLDG00000024662	ptrh1	92	79.717	ENSMMOG00000014747	ptrh1	74	77.725	Mola_mola
ENSSLDG00000024662	ptrh1	81	52.973	ENSMODG00000005503	PTRH1	75	54.545	Monodelphis_domestica
ENSSLDG00000024662	ptrh1	73	74.096	ENSMALG00000005392	ptrh1	96	72.121	Monopterus_albus
ENSSLDG00000024662	ptrh1	80	55.495	MGP_CAROLIEiJ_G0023450	Ptrh1	80	56.364	Mus_caroli
ENSSLDG00000024662	ptrh1	80	55.495	ENSMUSG00000053746	Ptrh1	80	56.364	Mus_musculus
ENSSLDG00000024662	ptrh1	80	55.495	MGP_PahariEiJ_G0024907	Ptrh1	80	56.364	Mus_pahari
ENSSLDG00000024662	ptrh1	80	56.044	MGP_SPRETEiJ_G0024367	Ptrh1	80	56.970	Mus_spretus
ENSSLDG00000024662	ptrh1	79	53.039	ENSMPUG00000013790	PTRH1	75	56.173	Mustela_putorius_furo
ENSSLDG00000024662	ptrh1	80	52.850	ENSMLUG00000013454	PTRH1	77	54.651	Myotis_lucifugus
ENSSLDG00000024662	ptrh1	81	57.609	ENSNGAG00000014008	Ptrh1	78	59.627	Nannospalax_galili
ENSSLDG00000024662	ptrh1	95	82.110	ENSNBRG00000015590	ptrh1	77	83.256	Neolamprologus_brichardi
ENSSLDG00000024662	ptrh1	81	55.435	ENSNLEG00000017468	PTRH1	75	58.642	Nomascus_leucogenys
ENSSLDG00000024662	ptrh1	81	56.522	ENSODEG00000004012	PTRH1	76	59.006	Octodon_degus
ENSSLDG00000024662	ptrh1	95	78.440	ENSONIG00000013912	ptrh1	82	83.721	Oreochromis_niloticus
ENSSLDG00000024662	ptrh1	69	60.510	ENSOANG00000011891	PTRH1	71	59.627	Ornithorhynchus_anatinus
ENSSLDG00000024662	ptrh1	81	54.891	ENSOCUG00000006894	PTRH1	69	58.025	Oryctolagus_cuniculus
ENSSLDG00000024662	ptrh1	80	55.801	ENSOGAG00000008094	PTRH1	77	59.877	Otolemur_garnettii
ENSSLDG00000024662	ptrh1	80	53.646	ENSOARG00000011808	PTRH1	77	54.545	Ovis_aries
ENSSLDG00000024662	ptrh1	81	55.435	ENSPPAG00000041782	PTRH1	75	58.642	Pan_paniscus
ENSSLDG00000024662	ptrh1	80	53.591	ENSPPRG00000007889	PTRH1	76	55.828	Panthera_pardus
ENSSLDG00000024662	ptrh1	54	53.279	ENSPTIG00000021082	-	77	57.426	Panthera_tigris_altaica
ENSSLDG00000024662	ptrh1	81	55.435	ENSPTRG00000021394	PTRH1	75	58.642	Pan_troglodytes
ENSSLDG00000024662	ptrh1	81	47.849	ENSPANG00000031755	PTRH1	74	50.000	Papio_anubis
ENSSLDG00000024662	ptrh1	93	63.208	ENSPKIG00000005449	ptrh1	54	70.909	Paramormyrops_kingsleyae
ENSSLDG00000024662	ptrh1	78	54.802	ENSPSIG00000013828	PTRH1	58	57.143	Pelodiscus_sinensis
ENSSLDG00000024662	ptrh1	74	69.412	ENSPMGG00000002148	ptrh1	60	69.231	Periophthalmus_magnuspinnatus
ENSSLDG00000024662	ptrh1	70	58.491	ENSPEMG00000014360	Ptrh1	80	57.927	Peromyscus_maniculatus_bairdii
ENSSLDG00000024662	ptrh1	89	80.198	ENSPFOG00000003715	ptrh1	75	75.743	Poecilia_formosa
ENSSLDG00000024662	ptrh1	92	77.404	ENSPLAG00000023354	ptrh1	82	73.077	Poecilia_latipinna
ENSSLDG00000024662	ptrh1	89	80.198	ENSPMEG00000000447	ptrh1	75	75.743	Poecilia_mexicana
ENSSLDG00000024662	ptrh1	89	77.723	ENSPREG00000012612	ptrh1	75	73.267	Poecilia_reticulata
ENSSLDG00000024662	ptrh1	81	52.174	ENSPPYG00000019628	PTRH1	69	54.938	Pongo_abelii
ENSSLDG00000024662	ptrh1	79	55.556	ENSPCAG00000007016	PTRH1	74	59.006	Procavia_capensis
ENSSLDG00000024662	ptrh1	80	57.143	ENSPCOG00000014541	PTRH1	74	59.877	Propithecus_coquereli
ENSSLDG00000024662	ptrh1	80	58.242	ENSPVAG00000000954	PTRH1	75	60.248	Pteropus_vampyrus
ENSSLDG00000024662	ptrh1	95	81.193	ENSPNYG00000007789	ptrh1	77	82.326	Pundamilia_nyererei
ENSSLDG00000024662	ptrh1	93	65.566	ENSPNAG00000029930	ptrh1	77	63.679	Pygocentrus_nattereri
ENSSLDG00000024662	ptrh1	80	56.593	ENSRNOG00000049034	Ptrh1	80	57.576	Rattus_norvegicus
ENSSLDG00000024662	ptrh1	81	55.978	ENSRBIG00000027290	PTRH1	75	59.259	Rhinopithecus_bieti
ENSSLDG00000024662	ptrh1	81	55.978	ENSRROG00000028799	PTRH1	70	59.259	Rhinopithecus_roxellana
ENSSLDG00000024662	ptrh1	78	32.796	YHR189W	PTH1	89	33.526	Saccharomyces_cerevisiae
ENSSLDG00000024662	ptrh1	81	56.522	ENSSBOG00000026699	PTRH1	70	59.877	Saimiri_boliviensis_boliviensis
ENSSLDG00000024662	ptrh1	78	53.889	ENSSHAG00000018238	PTRH1	82	54.438	Sarcophilus_harrisii
ENSSLDG00000024662	ptrh1	89	59.276	ENSSFOG00015007053	ptrh1	82	67.857	Scleropages_formosus
ENSSLDG00000024662	ptrh1	88	76.098	ENSSMAG00000016747	ptrh1	70	81.325	Scophthalmus_maximus
ENSSLDG00000024662	ptrh1	93	97.170	ENSSDUG00000013471	ptrh1	85	97.170	Seriola_dumerili
ENSSLDG00000024662	ptrh1	82	51.613	ENSSPUG00000000040	PTRH1	71	55.828	Sphenodon_punctatus
ENSSLDG00000024662	ptrh1	85	82.990	ENSSPAG00000003298	ptrh1	82	84.242	Stegastes_partitus
ENSSLDG00000024662	ptrh1	81	57.609	ENSSSCG00000005615	PTRH1	77	59.394	Sus_scrofa
ENSSLDG00000024662	ptrh1	59	55.556	ENSTGUG00000003648	PTRH1	100	55.556	Taeniopygia_guttata
ENSSLDG00000024662	ptrh1	87	79.397	ENSTRUG00000019801	PTRH1	77	75.238	Takifugu_rubripes
ENSSLDG00000024662	ptrh1	90	74.634	ENSTNIG00000016735	ptrh1	77	78.161	Tetraodon_nigroviridis
ENSSLDG00000024662	ptrh1	81	52.717	ENSTTRG00000016458	PTRH1	75	53.416	Tursiops_truncatus
ENSSLDG00000024662	ptrh1	80	55.801	ENSUAMG00000023948	-	72	59.006	Ursus_americanus
ENSSLDG00000024662	ptrh1	81	45.109	ENSVPAG00000001805	PTRH1	88	45.963	Vicugna_pacos
ENSSLDG00000024662	ptrh1	80	56.593	ENSVVUG00000013198	PTRH1	74	57.576	Vulpes_vulpes
ENSSLDG00000024662	ptrh1	83	51.064	ENSXETG00000009980	ptrh1	89	54.167	Xenopus_tropicalis
ENSSLDG00000024662	ptrh1	88	78.000	ENSXCOG00000011498	ptrh1	85	73.500	Xiphophorus_couchianus
ENSSLDG00000024662	ptrh1	88	79.500	ENSXMAG00000009256	ptrh1	75	75.000	Xiphophorus_maculatus