EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000024685 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 3498 bases
Position: chrPEQF01099586.1:2773286-2776783
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000032161	RRM_1	PF00076.22	3.7e-34	1	2
ENSSLDP00000032161	RRM_1	PF00076.22	3.7e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000033073	-	534	-	ENSSLDP00000032161	177 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000024685's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000024685's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000024685	-	86	60.131	ENSSLDG00000018999	HNRNPA3	54	60.131
ENSSLDG00000024685	-	86	59.477	ENSSLDG00000003718	hnrnpa1a	77	59.155
ENSSLDG00000024685	-	85	40.278	ENSSLDG00000005199	hnrnpaba	60	37.857
ENSSLDG00000024685	-	83	33.803	ENSSLDG00000018706	-	51	33.803
ENSSLDG00000024685	-	85	32.941	ENSSLDG00000000280	tardbpl	50	32.941
ENSSLDG00000024685	-	86	75.000	ENSSLDG00000024705	-	79	75.000
ENSSLDG00000024685	-	90	41.667	ENSSLDG00000017172	msi2a	62	41.667
ENSSLDG00000024685	-	85	38.667	ENSSLDG00000015962	hnrnpd	57	38.667
ENSSLDG00000024685	-	87	40.323	ENSSLDG00000016832	MSI1	51	40.323

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000024685	-	86	73.684	ENSAOCG00000015914	-	63	73.684	Amphiprion_ocellaris
ENSSLDG00000024685	-	88	97.436	ENSAOCG00000015951	-	96	97.436	Amphiprion_ocellaris
ENSSLDG00000024685	-	88	97.436	ENSAPEG00000002274	-	96	97.436	Amphiprion_percula
ENSSLDG00000024685	-	86	73.684	ENSAPEG00000002224	-	73	73.684	Amphiprion_percula
ENSSLDG00000024685	-	86	76.316	ENSACLG00000008978	-	81	76.316	Astatotilapia_calliptera
ENSSLDG00000024685	-	86	74.342	ENSCVAG00000008324	-	75	74.342	Cyprinodon_variegatus
ENSSLDG00000024685	-	87	38.961	ENSEBUG00000010003	-	80	38.961	Eptatretus_burgeri
ENSSLDG00000024685	-	86	82.895	ENSELUG00000014407	-	96	82.895	Esox_lucius
ENSSLDG00000024685	-	86	76.316	ENSHBUG00000023867	-	81	76.316	Haplochromis_burtoni
ENSSLDG00000024685	-	88	68.000	ENSHCOG00000007180	-	73	67.550	Hippocampus_comes
ENSSLDG00000024685	-	88	69.872	ENSLBEG00000006362	-	79	69.872	Labrus_bergylta
ENSSLDG00000024685	-	64	82.301	ENSLOCG00000012121	-	61	82.301	Lepisosteus_oculatus
ENSSLDG00000024685	-	88	73.077	ENSMAMG00000017728	-	68	73.077	Mastacembelus_armatus
ENSSLDG00000024685	-	86	76.316	ENSMZEG00005001063	-	79	76.316	Maylandia_zebra
ENSSLDG00000024685	-	88	92.308	ENSMMOG00000004242	-	98	92.308	Mola_mola
ENSSLDG00000024685	-	89	71.975	ENSORLG00000023542	-	64	71.069	Oryzias_latipes
ENSSLDG00000024685	-	89	71.338	ENSORLG00000023176	-	62	70.440	Oryzias_latipes
ENSSLDG00000024685	-	86	69.935	ENSORLG00000030284	-	63	66.972	Oryzias_latipes
ENSSLDG00000024685	-	84	74.830	ENSORLG00020006029	-	62	74.830	Oryzias_latipes_hni
ENSSLDG00000024685	-	88	72.436	ENSORLG00020007171	-	96	72.436	Oryzias_latipes_hni
ENSSLDG00000024685	-	88	70.370	ENSORLG00020007084	-	80	70.370	Oryzias_latipes_hni
ENSSLDG00000024685	-	85	66.447	ENSOMEG00000009566	-	78	66.447	Oryzias_melastigma
ENSSLDG00000024685	-	85	65.132	ENSOMEG00000006903	-	75	65.132	Oryzias_melastigma
ENSSLDG00000024685	-	85	68.000	ENSOMEG00000023475	-	66	68.000	Oryzias_melastigma
ENSSLDG00000024685	-	88	49.367	ENSOMEG00000006327	-	72	49.367	Oryzias_melastigma
ENSSLDG00000024685	-	85	66.447	ENSOMEG00000002509	-	83	65.789	Oryzias_melastigma
ENSSLDG00000024685	-	85	66.000	ENSOMEG00000021030	-	70	66.000	Oryzias_melastigma
ENSSLDG00000024685	-	85	66.447	ENSOMEG00000012368	-	66	66.447	Oryzias_melastigma
ENSSLDG00000024685	-	92	66.667	ENSOMEG00000002084	-	70	66.667	Oryzias_melastigma
ENSSLDG00000024685	-	85	66.447	ENSOMEG00000002000	-	68	66.013	Oryzias_melastigma
ENSSLDG00000024685	-	86	74.342	ENSPREG00000010603	-	58	74.342	Poecilia_reticulata
ENSSLDG00000024685	-	86	76.316	ENSPNYG00000020763	-	81	76.316	Pundamilia_nyererei
ENSSLDG00000024685	-	86	78.947	ENSPNAG00000018051	-	81	78.947	Pygocentrus_nattereri
ENSSLDG00000024685	-	97	63.372	ENSSHAG00000015609	-	82	66.667	Sarcophilus_harrisii
ENSSLDG00000024685	-	86	75.000	ENSSDUG00000002394	-	86	75.000	Seriola_dumerili