EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000024705 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 2261 bases
Position: chrPEQF01099586.1:2782839-2785099
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000032175	RRM_1	PF00076.22	4.1e-33	1	2
ENSSLDP00000032175	RRM_1	PF00076.22	4.1e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000033087	-	672	-	ENSSLDP00000032175	223 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000024705's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000024705's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000024705	-	90	39.512	ENSSLDG00000016832	MSI1	52	39.655
ENSSLDG00000024705	-	72	34.118	ENSSLDG00000023136	slirp	77	34.118
ENSSLDG00000024705	-	87	42.105	ENSSLDG00000015962	hnrnpd	53	42.105
ENSSLDG00000024705	-	76	37.647	ENSSLDG00000001911	-	51	37.647
ENSSLDG00000024705	-	80	53.409	ENSSLDG00000018999	HNRNPA3	55	53.107
ENSSLDG00000024705	-	85	38.251	ENSSLDG00000017172	msi2a	55	37.791
ENSSLDG00000024705	-	78	30.058	ENSSLDG00000000280	tardbpl	55	30.058
ENSSLDG00000024705	-	76	37.059	ENSSLDG00000005199	hnrnpaba	54	37.059
ENSSLDG00000024705	-	92	36.181	ENSSLDG00000018706	-	52	35.714
ENSSLDG00000024705	-	89	50.481	ENSSLDG00000003718	hnrnpa1a	87	50.237
ENSSLDG00000024705	-	79	75.000	ENSSLDG00000024685	-	86	75.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000024705	-	80	36.667	WBGene00019249	H28G03.1	56	36.667	Caenorhabditis_elegans
ENSSLDG00000024705	-	78	44.633	ENSCING00000004062	-	55	44.633	Ciona_intestinalis
ENSSLDG00000024705	-	82	41.530	ENSCSAVG00000000472	-	87	42.857	Ciona_savignyi
ENSSLDG00000024705	-	80	91.620	ENSMMOG00000004241	-	88	91.620	Mola_mola
ENSSLDG00000024705	-	87	94.872	ENSNBRG00000014522	-	85	94.845	Neolamprologus_brichardi