EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000024893 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: PKR
Full Name: -
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 9392 bases
Position: chrPEQF01098949.1:3547862-3557253
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000032444	dsrm	PF00035.26	2e-36	1	2
ENSSLDP00000032444	dsrm	PF00035.26	2e-36	2	2
ENSSLDP00000032423	dsrm	PF00035.26	2.6e-36	1	2
ENSSLDP00000032423	dsrm	PF00035.26	2.6e-36	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000033343	-	3623	-	ENSSLDP00000032423	701 (aa)	-	-
ENSSLDT00000033365	-	1935	-	ENSSLDP00000032444	644 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000024893's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000024893's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000024893	-	91	68.493	ENSSLDG00000024886	-	81	68.493
ENSSLDG00000024893	-	63	77.228	ENSSLDG00000024867	eif2ak2	76	77.561
ENSSLDG00000024893	-	93	74.830	ENSSLDG00000024874	eif2ak2	100	61.259

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000024893	-	92	61.333	ENSAPOG00000010706	eif2ak2	99	53.241	Acanthochromis_polyacanthus
ENSSLDG00000024893	-	93	76.721	ENSAPOG00000010636	-	100	69.220	Acanthochromis_polyacanthus
ENSSLDG00000024893	-	90	60.825	ENSAPOG00000010662	eif2ak2	99	47.894	Acanthochromis_polyacanthus
ENSSLDG00000024893	-	78	49.310	ENSACIG00000006955	-	96	49.310	Amphilophus_citrinellus
ENSSLDG00000024893	-	99	56.287	ENSACIG00000006536	eif2ak2	99	56.287	Amphilophus_citrinellus
ENSSLDG00000024893	-	99	63.701	ENSACIG00000007027	eif2ak2	99	64.540	Amphilophus_citrinellus
ENSSLDG00000024893	-	99	66.667	ENSACIG00000006777	eif2ak2	99	69.355	Amphilophus_citrinellus
ENSSLDG00000024893	-	55	77.922	ENSACIG00000006710	-	90	77.922	Amphilophus_citrinellus
ENSSLDG00000024893	-	93	77.377	ENSAOCG00000003414	-	100	69.263	Amphiprion_ocellaris
ENSSLDG00000024893	-	87	60.481	ENSAOCG00000003397	eif2ak2	99	47.114	Amphiprion_ocellaris
ENSSLDG00000024893	-	100	68.161	ENSAPEG00000023675	eif2ak2	95	77.124	Amphiprion_percula
ENSSLDG00000024893	-	87	61.592	ENSAPEG00000023879	eif2ak2	99	48.044	Amphiprion_percula
ENSSLDG00000024893	-	100	63.102	ENSATEG00000015063	eif2ak2	100	60.938	Anabas_testudineus
ENSSLDG00000024893	-	97	61.538	ENSATEG00000015425	eif2ak2	97	61.538	Anabas_testudineus
ENSSLDG00000024893	-	100	71.612	ENSATEG00000015535	eif2ak2	100	71.612	Anabas_testudineus
ENSSLDG00000024893	-	66	55.830	ENSACLG00000023843	-	98	55.605	Astatotilapia_calliptera
ENSSLDG00000024893	-	96	43.574	ENSAMXG00000003716	eif2ak2	99	42.904	Astyanax_mexicanus
ENSSLDG00000024893	-	87	61.338	ENSCSEG00000012820	-	99	51.750	Cynoglossus_semilaevis
ENSSLDG00000024893	-	100	39.680	ENSCSEG00000012878	eif2ak2	100	39.826	Cynoglossus_semilaevis
ENSSLDG00000024893	-	100	56.818	ENSCVAG00000014725	eif2ak2	95	71.053	Cyprinodon_variegatus
ENSSLDG00000024893	-	82	57.273	ENSCVAG00000003185	-	99	55.814	Cyprinodon_variegatus
ENSSLDG00000024893	-	98	43.634	ENSDARG00000068729	eif2ak2	98	43.201	Danio_rerio
ENSSLDG00000024893	-	99	53.251	ENSELUG00000018164	eif2ak2	99	50.868	Esox_lucius
ENSSLDG00000024893	-	88	44.025	ENSGMOG00000018784	eif2ak2	99	48.097	Gadus_morhua
ENSSLDG00000024893	-	83	45.342	ENSGMOG00000018813	eif2ak2	100	45.342	Gadus_morhua
ENSSLDG00000024893	-	97	45.865	ENSGAFG00000005231	-	98	45.865	Gambusia_affinis
ENSSLDG00000024893	-	88	52.281	ENSHBUG00000022216	-	94	58.385	Haplochromis_burtoni
ENSSLDG00000024893	-	91	63.880	ENSHBUG00000022151	-	98	47.619	Haplochromis_burtoni
ENSSLDG00000024893	-	98	49.768	ENSHCOG00000010443	-	99	51.094	Hippocampus_comes
ENSSLDG00000024893	-	97	45.064	ENSIPUG00000019933	eif2ak2	97	44.778	Ictalurus_punctatus
ENSSLDG00000024893	-	99	69.822	ENSMAMG00000017342	eif2ak2	99	70.833	Mastacembelus_armatus
ENSSLDG00000024893	-	78	67.391	ENSMAMG00000017311	eif2ak2	95	67.391	Mastacembelus_armatus
ENSSLDG00000024893	-	91	63.545	ENSMZEG00005009773	eif2ak2	87	69.333	Maylandia_zebra
ENSSLDG00000024893	-	100	53.593	ENSMZEG00005009825	eif2ak2	100	53.144	Maylandia_zebra
ENSSLDG00000024893	-	98	65.087	ENSMMOG00000000711	-	98	64.929	Mola_mola
ENSSLDG00000024893	-	99	73.653	ENSMALG00000005083	eif2ak2	99	73.653	Monopterus_albus
ENSSLDG00000024893	-	98	42.671	ENSMALG00000005115	eif2ak2	97	42.836	Monopterus_albus
ENSSLDG00000024893	-	100	58.289	ENSNBRG00000011967	eif2ak2	100	58.289	Neolamprologus_brichardi
ENSSLDG00000024893	-	100	43.091	ENSNBRG00000019433	-	100	45.030	Neolamprologus_brichardi
ENSSLDG00000024893	-	99	63.877	ENSNBRG00000012219	-	99	64.095	Neolamprologus_brichardi
ENSSLDG00000024893	-	89	51.340	ENSONIG00000010933	-	100	51.546	Oreochromis_niloticus
ENSSLDG00000024893	-	92	62.171	ENSORLG00000018980	-	100	52.415	Oryzias_latipes
ENSSLDG00000024893	-	92	52.667	ENSORLG00000012432	eif2ak2	99	52.000	Oryzias_latipes
ENSSLDG00000024893	-	99	48.288	ENSORLG00020014073	eif2ak2	99	48.288	Oryzias_latipes_hni
ENSSLDG00000024893	-	93	61.613	ENSORLG00020014108	-	100	52.347	Oryzias_latipes_hni
ENSSLDG00000024893	-	92	62.171	ENSORLG00015023149	eif2ak2	94	61.290	Oryzias_latipes_hsok
ENSSLDG00000024893	-	99	43.195	ENSORLG00015023155	eif2ak2	99	48.515	Oryzias_latipes_hsok
ENSSLDG00000024893	-	91	56.000	ENSOMEG00000019857	eif2ak2	99	52.000	Oryzias_melastigma
ENSSLDG00000024893	-	100	46.667	ENSOMEG00000019925	-	100	46.667	Oryzias_melastigma
ENSSLDG00000024893	-	99	42.635	ENSPKIG00000024036	eif2ak2	99	42.635	Paramormyrops_kingsleyae
ENSSLDG00000024893	-	74	50.746	ENSPMGG00000001624	-	95	50.746	Periophthalmus_magnuspinnatus
ENSSLDG00000024893	-	99	58.480	ENSPMGG00000001652	eif2ak2	99	58.480	Periophthalmus_magnuspinnatus
ENSSLDG00000024893	-	99	60.736	ENSPLAG00000023307	-	99	60.736	Poecilia_latipinna
ENSSLDG00000024893	-	100	58.440	ENSPMEG00000013612	-	99	58.440	Poecilia_mexicana
ENSSLDG00000024893	-	90	55.401	ENSPMEG00000013631	eif2ak2	99	46.549	Poecilia_mexicana
ENSSLDG00000024893	-	97	43.987	ENSPREG00000007905	-	97	43.829	Poecilia_reticulata
ENSSLDG00000024893	-	97	58.824	ENSPNYG00000014187	eif2ak2	96	59.358	Pundamilia_nyererei
ENSSLDG00000024893	-	98	60.030	ENSPNYG00000014220	-	98	60.152	Pundamilia_nyererei
ENSSLDG00000024893	-	67	57.143	ENSPNYG00000023883	-	92	57.143	Pundamilia_nyererei
ENSSLDG00000024893	-	98	50.825	ENSPNAG00000000508	eif2ak2	99	44.334	Pygocentrus_nattereri
ENSSLDG00000024893	-	87	61.184	ENSSMAG00000010296	-	100	58.333	Scophthalmus_maximus
ENSSLDG00000024893	-	100	96.291	ENSSDUG00000002837	eif2ak2	100	96.291	Seriola_dumerili
ENSSLDG00000024893	-	91	68.041	ENSSDUG00000002922	eif2ak2	81	68.041	Seriola_dumerili
ENSSLDG00000024893	-	60	64.865	ENSSPAG00000007476	-	81	64.865	Stegastes_partitus
ENSSLDG00000024893	-	78	60.900	ENSSPAG00000007629	-	98	48.585	Stegastes_partitus
ENSSLDG00000024893	-	96	45.872	ENSTRUG00000022205	-	97	45.872	Takifugu_rubripes
ENSSLDG00000024893	-	93	39.232	ENSXETG00000009025	pkr2	98	42.857	Xenopus_tropicalis
ENSSLDG00000024893	-	84	42.344	ENSXCOG00000006961	-	96	51.579	Xiphophorus_couchianus
ENSSLDG00000024893	-	94	58.485	ENSXMAG00000006521	eif2ak2	99	58.485	Xiphophorus_maculatus
ENSSLDG00000024893	-	91	54.110	ENSXMAG00000006536	eif2ak2	93	54.110	Xiphophorus_maculatus