EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000024948 (Gene tree)
Gene ID: -
Gene Symbol: ythdf1
Alias: fb49c02|wu:fb49c02|wu:fi19h06|wu:fj87f09|wu:fp06c11|zgc:55657
Full Name: YTH domain-containing family protein 1-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 7582 bases
Position: chrPEQF01098741.1:981581-989162
Accession: 111654205
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000032506	YTH	PF04146.15	7.4e-41	1	1
ENSSLDP00000032512	YTH	PF04146.15	7.5e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000033433	-	1842	XM_023405117	ENSSLDP00000032512	613 (aa)	XP_023260885	-
ENSSLDT00000033427	-	5196	XM_023405116	ENSSLDP00000032506	620 (aa)	XP_023260884	-

Gene Model

Click here to download ENSSLDG00000024948's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000024948's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000024948	ythdf1	96	58.689	ENSSLDG00000019751	ythdf2	96	56.364
ENSSLDG00000024948	ythdf1	94	57.751	ENSSLDG00000005029	ythdf3	97	57.471
ENSSLDG00000024948	ythdf1	99	76.935	ENSSLDG00000001054	YTHDF1	90	95.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000024948	ythdf1	96	71.477	ENSG00000149658	YTHDF1	96	69.966	Homo_sapiens
ENSSLDG00000024948	ythdf1	99	76.183	ENSAPOG00000010796	YTHDF1	99	78.652	Acanthochromis_polyacanthus
ENSSLDG00000024948	ythdf1	99	96.921	ENSAPOG00000004358	ythdf1	99	96.921	Acanthochromis_polyacanthus
ENSSLDG00000024948	ythdf1	95	83.926	ENSACIG00000011264	ythdf1	96	83.926	Amphilophus_citrinellus
ENSSLDG00000024948	ythdf1	95	77.015	ENSACIG00000020083	YTHDF1	96	77.530	Amphilophus_citrinellus
ENSSLDG00000024948	ythdf1	99	96.434	ENSAOCG00000022251	ythdf1	99	96.512	Amphiprion_ocellaris
ENSSLDG00000024948	ythdf1	99	76.656	ENSAOCG00000012567	YTHDF1	99	78.491	Amphiprion_ocellaris
ENSSLDG00000024948	ythdf1	99	76.814	ENSAPEG00000008750	YTHDF1	99	78.652	Amphiprion_percula
ENSSLDG00000024948	ythdf1	99	96.434	ENSAPEG00000021878	ythdf1	99	96.434	Amphiprion_percula
ENSSLDG00000024948	ythdf1	99	94.976	ENSATEG00000023840	ythdf1	99	94.976	Anabas_testudineus
ENSSLDG00000024948	ythdf1	99	78.010	ENSATEG00000005996	YTHDF1	99	78.170	Anabas_testudineus
ENSSLDG00000024948	ythdf1	96	70.588	ENSACAG00000005560	YTHDF1	96	71.039	Anolis_carolinensis
ENSSLDG00000024948	ythdf1	96	70.119	ENSANAG00000034786	-	96	70.275	Aotus_nancymaae
ENSSLDG00000024948	ythdf1	97	59.000	ENSANAG00000021022	-	96	58.784	Aotus_nancymaae
ENSSLDG00000024948	ythdf1	99	76.923	ENSACLG00000025518	YTHDF1	99	78.185	Astatotilapia_calliptera
ENSSLDG00000024948	ythdf1	95	69.915	ENSBTAG00000010383	YTHDF1	96	69.588	Bos_taurus
ENSSLDG00000024948	ythdf1	96	69.949	ENSCJAG00000010056	YTHDF1	96	69.625	Callithrix_jacchus
ENSSLDG00000024948	ythdf1	95	69.573	ENSCHIG00000026494	YTHDF1	96	69.060	Capra_hircus
ENSSLDG00000024948	ythdf1	93	71.579	ENSTSYG00000033436	YTHDF1	95	71.228	Carlito_syrichta
ENSSLDG00000024948	ythdf1	95	70.377	ENSCAPG00000002544	YTHDF1	90	69.527	Cavia_aperea
ENSSLDG00000024948	ythdf1	96	70.187	ENSCPOG00000010202	YTHDF1	96	69.283	Cavia_porcellus
ENSSLDG00000024948	ythdf1	96	70.798	ENSCATG00000033272	YTHDF1	96	70.790	Cercocebus_atys
ENSSLDG00000024948	ythdf1	96	71.017	ENSCLAG00000005989	YTHDF1	96	70.427	Chinchilla_lanigera
ENSSLDG00000024948	ythdf1	96	70.798	ENSCSAG00000016266	YTHDF1	96	70.790	Chlorocebus_sabaeus
ENSSLDG00000024948	ythdf1	96	70.897	ENSCPBG00000027183	YTHDF1	96	70.598	Chrysemys_picta_bellii
ENSSLDG00000024948	ythdf1	94	70.698	ENSCANG00000029082	YTHDF1	95	70.690	Colobus_angolensis_palliatus
ENSSLDG00000024948	ythdf1	98	70.315	ENSCGRG00001016568	Ythdf1	96	70.840	Cricetulus_griseus_chok1gshd
ENSSLDG00000024948	ythdf1	94	71.012	ENSCGRG00000009207	Ythdf1	96	70.812	Cricetulus_griseus_crigri
ENSSLDG00000024948	ythdf1	95	85.077	ENSCSEG00000020623	YTHDF1	97	85.249	Cynoglossus_semilaevis
ENSSLDG00000024948	ythdf1	99	78.191	ENSCVAG00000014378	YTHDF1	99	78.374	Cyprinodon_variegatus
ENSSLDG00000024948	ythdf1	99	88.817	ENSCVAG00000017940	ythdf1	99	88.169	Cyprinodon_variegatus
ENSSLDG00000024948	ythdf1	99	83.902	ENSDARG00000016447	ythdf1	99	83.819	Danio_rerio
ENSSLDG00000024948	ythdf1	96	70.728	ENSDNOG00000043590	YTHDF1	96	70.790	Dasypus_novemcinctus
ENSSLDG00000024948	ythdf1	79	56.024	ENSETEG00000017860	-	95	61.905	Echinops_telfairi
ENSSLDG00000024948	ythdf1	88	69.963	ENSEEUG00000007461	YTHDF1	96	69.274	Erinaceus_europaeus
ENSSLDG00000024948	ythdf1	99	72.840	ENSELUG00000001906	YTHDF1	96	74.635	Esox_lucius
ENSSLDG00000024948	ythdf1	99	84.330	ENSELUG00000022768	ythdf1	99	85.048	Esox_lucius
ENSSLDG00000024948	ythdf1	96	70.389	ENSFALG00000010463	YTHDF1	96	70.598	Ficedula_albicollis
ENSSLDG00000024948	ythdf1	99	89.789	ENSFHEG00000023218	ythdf1	99	90.438	Fundulus_heteroclitus
ENSSLDG00000024948	ythdf1	99	77.849	ENSFHEG00000002540	YTHDF1	99	78.010	Fundulus_heteroclitus
ENSSLDG00000024948	ythdf1	99	76.341	ENSGAFG00000021100	YTHDF1	99	78.331	Gambusia_affinis
ENSSLDG00000024948	ythdf1	99	91.234	ENSGACG00000012014	ythdf1	99	90.422	Gasterosteus_aculeatus
ENSSLDG00000024948	ythdf1	98	74.921	ENSGACG00000002613	YTHDF1	97	75.626	Gasterosteus_aculeatus
ENSSLDG00000024948	ythdf1	96	71.066	ENSGAGG00000003007	YTHDF1	96	71.111	Gopherus_agassizii
ENSSLDG00000024948	ythdf1	96	71.647	ENSGGOG00000008340	YTHDF1	96	70.137	Gorilla_gorilla
ENSSLDG00000024948	ythdf1	100	94.194	ENSHBUG00000011284	ythdf1	98	94.194	Haplochromis_burtoni
ENSSLDG00000024948	ythdf1	99	76.442	ENSHBUG00000004875	YTHDF1	99	77.707	Haplochromis_burtoni
ENSSLDG00000024948	ythdf1	96	70.289	ENSHGLG00000006585	YTHDF1	96	69.795	Heterocephalus_glaber_female
ENSSLDG00000024948	ythdf1	96	70.289	ENSHGLG00100004683	YTHDF1	96	69.795	Heterocephalus_glaber_male
ENSSLDG00000024948	ythdf1	97	87.728	ENSHCOG00000008866	ythdf1	97	88.156	Hippocampus_comes
ENSSLDG00000024948	ythdf1	99	75.441	ENSHCOG00000011303	YTHDF1	99	75.929	Hippocampus_comes
ENSSLDG00000024948	ythdf1	99	78.973	ENSIPUG00000000425	Ythdf1	99	78.503	Ictalurus_punctatus
ENSSLDG00000024948	ythdf1	94	71.039	ENSJJAG00000013589	Ythdf1	96	70.415	Jaculus_jaculus
ENSSLDG00000024948	ythdf1	99	77.742	ENSKMAG00000017472	YTHDF1	99	77.760	Kryptolebias_marmoratus
ENSSLDG00000024948	ythdf1	99	90.438	ENSKMAG00000005595	ythdf1	99	89.141	Kryptolebias_marmoratus
ENSSLDG00000024948	ythdf1	99	77.814	ENSLBEG00000012068	YTHDF1	99	77.302	Labrus_bergylta
ENSSLDG00000024948	ythdf1	99	93.355	ENSLBEG00000014105	ythdf1	99	93.517	Labrus_bergylta
ENSSLDG00000024948	ythdf1	94	71.750	ENSLACG00000014195	YTHDF1	95	72.212	Latimeria_chalumnae
ENSSLDG00000024948	ythdf1	99	74.056	ENSLOCG00000005020	ythdf1	99	73.871	Lepisosteus_oculatus
ENSSLDG00000024948	ythdf1	96	71.721	ENSLAFG00000008884	YTHDF1	96	70.790	Loxodonta_africana
ENSSLDG00000024948	ythdf1	96	70.798	ENSMFAG00000042868	YTHDF1	96	70.790	Macaca_fascicularis
ENSSLDG00000024948	ythdf1	96	70.798	ENSMMUG00000009227	YTHDF1	96	70.790	Macaca_mulatta
ENSSLDG00000024948	ythdf1	96	70.798	ENSMNEG00000030851	YTHDF1	96	70.790	Macaca_nemestrina
ENSSLDG00000024948	ythdf1	95	71.092	ENSMLEG00000009252	YTHDF1	96	70.934	Mandrillus_leucophaeus
ENSSLDG00000024948	ythdf1	99	92.869	ENSMAMG00000024255	ythdf1	99	91.896	Mastacembelus_armatus
ENSSLDG00000024948	ythdf1	99	78.010	ENSMAMG00000011072	YTHDF1	99	78.331	Mastacembelus_armatus
ENSSLDG00000024948	ythdf1	99	94.643	ENSMZEG00005026397	ythdf1	99	94.643	Maylandia_zebra
ENSSLDG00000024948	ythdf1	99	76.442	ENSMZEG00005023596	YTHDF1	99	77.707	Maylandia_zebra
ENSSLDG00000024948	ythdf1	96	71.115	ENSMAUG00000017660	Ythdf1	97	70.690	Mesocricetus_auratus
ENSSLDG00000024948	ythdf1	96	70.017	ENSMICG00000032266	YTHDF1	96	69.588	Microcebus_murinus
ENSSLDG00000024948	ythdf1	96	71.039	ENSMOCG00000013573	Ythdf1	96	71.012	Microtus_ochrogaster
ENSSLDG00000024948	ythdf1	95	90.986	ENSMMOG00000017500	ythdf1	95	89.116	Mola_mola
ENSSLDG00000024948	ythdf1	99	77.561	ENSMMOG00000020467	YTHDF1	98	77.472	Mola_mola
ENSSLDG00000024948	ythdf1	87	72.067	ENSMODG00000016842	YTHDF1	96	71.617	Monodelphis_domestica
ENSSLDG00000024948	ythdf1	99	77.060	ENSMALG00000022209	YTHDF1	99	77.207	Monopterus_albus
ENSSLDG00000024948	ythdf1	99	93.994	ENSMALG00000015672	ythdf1	99	93.994	Monopterus_albus
ENSSLDG00000024948	ythdf1	96	70.798	MGP_CAROLIEiJ_G0024790	Ythdf1	96	70.669	Mus_caroli
ENSSLDG00000024948	ythdf1	96	70.798	ENSMUSG00000038848	Ythdf1	96	70.669	Mus_musculus
ENSSLDG00000024948	ythdf1	96	70.798	MGP_PahariEiJ_G0026237	Ythdf1	96	70.669	Mus_pahari
ENSSLDG00000024948	ythdf1	96	70.798	MGP_SPRETEiJ_G0025715	Ythdf1	96	70.669	Mus_spretus
ENSSLDG00000024948	ythdf1	87	67.164	ENSMPUG00000008111	YTHDF1	96	68.668	Mustela_putorius_furo
ENSSLDG00000024948	ythdf1	93	71.750	ENSMLUG00000002241	YTHDF1	93	71.429	Myotis_lucifugus
ENSSLDG00000024948	ythdf1	96	71.138	ENSNGAG00000000334	Ythdf1	96	71.012	Nannospalax_galili
ENSSLDG00000024948	ythdf1	95	78.078	ENSNBRG00000015321	YTHDF1	97	77.741	Neolamprologus_brichardi
ENSSLDG00000024948	ythdf1	95	93.559	ENSNBRG00000008213	ythdf1	95	96.121	Neolamprologus_brichardi
ENSSLDG00000024948	ythdf1	93	64.675	ENSOPRG00000001758	-	98	64.602	Ochotona_princeps
ENSSLDG00000024948	ythdf1	95	58.108	ENSODEG00000000074	-	95	58.163	Octodon_degus
ENSSLDG00000024948	ythdf1	95	92.203	ENSONIG00000016799	ythdf1	98	94.709	Oreochromis_niloticus
ENSSLDG00000024948	ythdf1	96	72.619	ENSOANG00000003723	YTHDF1	96	71.821	Ornithorhynchus_anatinus
ENSSLDG00000024948	ythdf1	99	89.789	ENSORLG00000014665	YTHDF1	99	88.655	Oryzias_latipes
ENSSLDG00000024948	ythdf1	99	77.147	ENSORLG00000009739	YTHDF1	99	76.083	Oryzias_latipes
ENSSLDG00000024948	ythdf1	99	90.438	ENSORLG00020000307	ythdf1	99	89.286	Oryzias_latipes_hni
ENSSLDG00000024948	ythdf1	99	77.310	ENSORLG00020001332	YTHDF1	99	76.367	Oryzias_latipes_hni
ENSSLDG00000024948	ythdf1	99	90.276	ENSORLG00015006302	ythdf1	99	89.141	Oryzias_latipes_hsok
ENSSLDG00000024948	ythdf1	99	76.823	ENSORLG00015018321	YTHDF1	99	75.762	Oryzias_latipes_hsok
ENSSLDG00000024948	ythdf1	99	90.584	ENSOMEG00000002941	YTHDF1	99	89.286	Oryzias_melastigma
ENSSLDG00000024948	ythdf1	99	77.266	ENSOMEG00000011843	YTHDF1	99	76.167	Oryzias_melastigma
ENSSLDG00000024948	ythdf1	96	69.218	ENSOGAG00000000480	YTHDF1	96	69.349	Otolemur_garnettii
ENSSLDG00000024948	ythdf1	95	71.933	ENSPPAG00000023277	YTHDF1	96	70.205	Pan_paniscus
ENSSLDG00000024948	ythdf1	78	79.464	ENSPTIG00000017355	YTHDF1	92	79.464	Panthera_tigris_altaica
ENSSLDG00000024948	ythdf1	96	71.647	ENSPTRG00000013730	YTHDF1	96	70.137	Pan_troglodytes
ENSSLDG00000024948	ythdf1	96	70.798	ENSPANG00000021472	YTHDF1	96	70.790	Papio_anubis
ENSSLDG00000024948	ythdf1	97	71.833	ENSPKIG00000005026	YTHDF1	96	70.826	Paramormyrops_kingsleyae
ENSSLDG00000024948	ythdf1	95	71.717	ENSPSIG00000005529	YTHDF1	95	70.962	Pelodiscus_sinensis
ENSSLDG00000024948	ythdf1	93	78.223	ENSPMGG00000009101	YTHDF1	96	79.203	Periophthalmus_magnuspinnatus
ENSSLDG00000024948	ythdf1	92	86.491	ENSPMGG00000015328	ythdf1	96	87.500	Periophthalmus_magnuspinnatus
ENSSLDG00000024948	ythdf1	94	71.724	ENSPEMG00000020199	Ythdf1	96	71.555	Peromyscus_maniculatus_bairdii
ENSSLDG00000024948	ythdf1	97	72.773	ENSPCIG00000017170	YTHDF1	96	71.805	Phascolarctos_cinereus
ENSSLDG00000024948	ythdf1	99	89.286	ENSPFOG00000005405	ythdf1	99	89.286	Poecilia_formosa
ENSSLDG00000024948	ythdf1	99	77.849	ENSPLAG00000006298	YTHDF1	99	78.331	Poecilia_latipinna
ENSSLDG00000024948	ythdf1	99	89.286	ENSPLAG00000006653	ythdf1	99	89.286	Poecilia_latipinna
ENSSLDG00000024948	ythdf1	99	88.493	ENSPMEG00000023753	ythdf1	99	89.141	Poecilia_mexicana
ENSSLDG00000024948	ythdf1	99	77.849	ENSPMEG00000020969	-	99	78.331	Poecilia_mexicana
ENSSLDG00000024948	ythdf1	99	89.286	ENSPREG00000002173	ythdf1	99	89.286	Poecilia_reticulata
ENSSLDG00000024948	ythdf1	97	78.037	ENSPREG00000017662	YTHDF1	97	78.536	Poecilia_reticulata
ENSSLDG00000024948	ythdf1	77	91.304	ENSPPYG00000011226	YTHDF1	95	91.667	Pongo_abelii
ENSSLDG00000024948	ythdf1	88	68.946	ENSPCAG00000002452	YTHDF1	98	68.460	Procavia_capensis
ENSSLDG00000024948	ythdf1	96	70.358	ENSPCOG00000025969	YTHDF1	96	69.931	Propithecus_coquereli
ENSSLDG00000024948	ythdf1	97	64.418	ENSPVAG00000017568	YTHDF1	97	67.642	Pteropus_vampyrus
ENSSLDG00000024948	ythdf1	99	76.442	ENSPNYG00000002266	YTHDF1	99	77.707	Pundamilia_nyererei
ENSSLDG00000024948	ythdf1	100	94.194	ENSPNYG00000014007	ythdf1	98	94.194	Pundamilia_nyererei
ENSSLDG00000024948	ythdf1	99	82.927	ENSPNAG00000012447	ythdf1	99	83.333	Pygocentrus_nattereri
ENSSLDG00000024948	ythdf1	96	70.528	ENSRNOG00000027015	Ythdf1	96	70.669	Rattus_norvegicus
ENSSLDG00000024948	ythdf1	96	69.949	ENSRBIG00000044959	YTHDF1	96	69.931	Rhinopithecus_bieti
ENSSLDG00000024948	ythdf1	96	69.949	ENSRROG00000033014	YTHDF1	96	69.931	Rhinopithecus_roxellana
ENSSLDG00000024948	ythdf1	93	70.105	ENSSBOG00000027278	YTHDF1	96	68.284	Saimiri_boliviensis_boliviensis
ENSSLDG00000024948	ythdf1	94	72.509	ENSSHAG00000010430	YTHDF1	85	72.145	Sarcophilus_harrisii
ENSSLDG00000024948	ythdf1	99	74.716	ENSSFOG00015000284	ythdf1	99	75.481	Scleropages_formosus
ENSSLDG00000024948	ythdf1	99	77.778	ENSSMAG00000007635	YTHDF1	98	78.211	Scophthalmus_maximus
ENSSLDG00000024948	ythdf1	69	97.452	ENSSMAG00000013715	ythdf1	93	93.985	Scophthalmus_maximus
ENSSLDG00000024948	ythdf1	94	78.313	ENSSDUG00000015823	YTHDF1	99	76.526	Seriola_dumerili
ENSSLDG00000024948	ythdf1	99	99.675	ENSSDUG00000000435	ythdf1	99	99.675	Seriola_dumerili
ENSSLDG00000024948	ythdf1	99	76.025	ENSSPAG00000003666	YTHDF1	99	77.849	Stegastes_partitus
ENSSLDG00000024948	ythdf1	99	95.652	ENSSPAG00000014989	ythdf1	99	95.652	Stegastes_partitus
ENSSLDG00000024948	ythdf1	95	76.783	ENSTRUG00000005049	YTHDF1	97	77.387	Takifugu_rubripes
ENSSLDG00000024948	ythdf1	95	90.832	ENSTRUG00000004288	ythdf1	97	90.832	Takifugu_rubripes
ENSSLDG00000024948	ythdf1	95	74.490	ENSTNIG00000003975	YTHDF1	96	74.194	Tetraodon_nigroviridis
ENSSLDG00000024948	ythdf1	95	83.362	ENSTNIG00000012490	ythdf1	96	83.192	Tetraodon_nigroviridis
ENSSLDG00000024948	ythdf1	95	72.081	ENSXETG00000027086	ythdf1	95	71.875	Xenopus_tropicalis
ENSSLDG00000024948	ythdf1	97	76.221	ENSXCOG00000008115	YTHDF1	99	78.275	Xiphophorus_couchianus
ENSSLDG00000024948	ythdf1	95	86.860	ENSXCOG00000002490	ythdf1	93	86.585	Xiphophorus_couchianus
ENSSLDG00000024948	ythdf1	99	76.341	ENSXMAG00000015644	YTHDF1	99	78.331	Xiphophorus_maculatus
ENSSLDG00000024948	ythdf1	99	87.662	ENSXMAG00000008525	ythdf1	99	89.046	Xiphophorus_maculatus