EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000025007 (Gene tree)
Gene ID: -
Gene Symbol: trmt12
Alias: zgc:153361
Full Name: tRNA methyltransferase 12 homolog
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 5811 bases
Position: chrPEQF01099586.1:3067537-3073347
Accession: 111648183
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000032582	MTS	PF05175.14	1.1e-05	1	1
ENSSLDP00000032582	Met_10	PF02475.16	1.2e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000033504	-	2806	XM_023397987	ENSSLDP00000032582	405 (aa)	XP_023253755	UPI000C6F4B13

Gene Model

Click here to download ENSSLDG00000025007's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000025007's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000025007	trmt12	96	52.058	ENSG00000183665	TRMT12	92	52.058	Homo_sapiens
ENSSLDG00000025007	trmt12	100	82.716	ENSAPOG00000011979	trmt12	100	82.716	Acanthochromis_polyacanthus
ENSSLDG00000025007	trmt12	96	51.574	ENSAMEG00000019612	TRMT12	92	51.574	Ailuropoda_melanoleuca
ENSSLDG00000025007	trmt12	96	81.395	ENSACIG00000012982	trmt12	100	81.395	Amphilophus_citrinellus
ENSSLDG00000025007	trmt12	100	82.716	ENSAOCG00000020570	trmt12	100	82.716	Amphiprion_ocellaris
ENSSLDG00000025007	trmt12	100	83.704	ENSAPEG00000006335	trmt12	100	83.704	Amphiprion_percula
ENSSLDG00000025007	trmt12	100	83.951	ENSATEG00000018316	trmt12	100	83.951	Anabas_testudineus
ENSSLDG00000025007	trmt12	100	78.519	ENSACLG00000001008	trmt12	100	78.519	Astatotilapia_calliptera
ENSSLDG00000025007	trmt12	99	58.571	ENSAMXG00000040366	trmt12	99	58.571	Astyanax_mexicanus
ENSSLDG00000025007	trmt12	96	51.214	ENSBTAG00000020398	TRMT12	89	51.214	Bos_taurus
ENSSLDG00000025007	trmt12	96	49.879	ENSCJAG00000022174	TRMT12	92	49.879	Callithrix_jacchus
ENSSLDG00000025007	trmt12	96	50.847	ENSCAFG00000001040	TRMT12	94	50.847	Canis_familiaris
ENSSLDG00000025007	trmt12	96	50.847	ENSCAFG00020006500	TRMT12	94	50.847	Canis_lupus_dingo
ENSSLDG00000025007	trmt12	96	50.485	ENSCHIG00000016574	TRMT12	94	50.485	Capra_hircus
ENSSLDG00000025007	trmt12	99	50.474	ENSCPOG00000026520	TRMT12	95	50.474	Cavia_porcellus
ENSSLDG00000025007	trmt12	96	51.816	ENSCSAG00000018615	TRMT12	92	51.816	Chlorocebus_sabaeus
ENSSLDG00000025007	trmt12	97	52.471	ENSCPBG00000014290	TRMT12	93	52.471	Chrysemys_picta_bellii
ENSSLDG00000025007	trmt12	71	46.758	ENSCING00000019633	-	97	46.758	Ciona_intestinalis
ENSSLDG00000025007	trmt12	75	48.026	ENSCSAVG00000000415	-	95	48.026	Ciona_savignyi
ENSSLDG00000025007	trmt12	97	49.500	ENSCGRG00001014834	Trmt12	95	49.500	Cricetulus_griseus_chok1gshd
ENSSLDG00000025007	trmt12	99	70.343	ENSCSEG00000002675	trmt12	95	70.343	Cynoglossus_semilaevis
ENSSLDG00000025007	trmt12	100	73.333	ENSCVAG00000005590	trmt12	100	73.333	Cyprinodon_variegatus
ENSSLDG00000025007	trmt12	99	60.784	ENSDARG00000060338	trmt12	99	60.784	Danio_rerio
ENSSLDG00000025007	trmt12	96	49.637	ENSETEG00000009373	TRMT12	92	49.637	Echinops_telfairi
ENSSLDG00000025007	trmt12	96	51.090	ENSEASG00005022441	TRMT12	94	51.090	Equus_asinus_asinus
ENSSLDG00000025007	trmt12	97	50.000	ENSEEUG00000004844	TRMT12	93	50.000	Erinaceus_europaeus
ENSSLDG00000025007	trmt12	99	65.764	ENSELUG00000004240	trmt12	99	66.398	Esox_lucius
ENSSLDG00000025007	trmt12	64	58.571	ENSFALG00000003825	TRMT12	94	66.990	Ficedula_albicollis
ENSSLDG00000025007	trmt12	99	49.882	ENSFDAG00000016647	TRMT12	97	49.882	Fukomys_damarensis
ENSSLDG00000025007	trmt12	93	65.252	ENSFHEG00000017338	trmt12	96	65.252	Fundulus_heteroclitus
ENSSLDG00000025007	trmt12	82	55.398	ENSGALG00000006773	TRMT12	77	55.398	Gallus_gallus
ENSSLDG00000025007	trmt12	100	75.062	ENSGAFG00000020056	trmt12	100	75.062	Gambusia_affinis
ENSSLDG00000025007	trmt12	96	76.546	ENSGACG00000017351	trmt12	100	76.546	Gasterosteus_aculeatus
ENSSLDG00000025007	trmt12	97	53.318	ENSGAGG00000006032	TRMT12	95	53.318	Gopherus_agassizii
ENSSLDG00000025007	trmt12	100	78.272	ENSHBUG00000016412	trmt12	100	78.272	Haplochromis_burtoni
ENSSLDG00000025007	trmt12	99	48.471	ENSHGLG00000020498	TRMT12	97	48.471	Heterocephalus_glaber_female
ENSSLDG00000025007	trmt12	99	49.176	ENSHGLG00100020132	TRMT12	97	49.176	Heterocephalus_glaber_male
ENSSLDG00000025007	trmt12	100	70.617	ENSHCOG00000005050	trmt12	96	77.410	Hippocampus_comes
ENSSLDG00000025007	trmt12	99	58.780	ENSIPUG00000018011	trmt12	92	58.780	Ictalurus_punctatus
ENSSLDG00000025007	trmt12	97	50.361	ENSSTOG00000030617	TRMT12	94	50.361	Ictidomys_tridecemlineatus
ENSSLDG00000025007	trmt12	99	76.601	ENSKMAG00000000891	trmt12	99	76.601	Kryptolebias_marmoratus
ENSSLDG00000025007	trmt12	54	81.193	ENSLBEG00000017456	-	89	81.193	Labrus_bergylta
ENSSLDG00000025007	trmt12	100	73.153	ENSLBEG00000028712	trmt12	100	73.153	Labrus_bergylta
ENSSLDG00000025007	trmt12	97	51.306	ENSLACG00000015869	TRMT12	94	51.306	Latimeria_chalumnae
ENSSLDG00000025007	trmt12	99	56.897	ENSLOCG00000015290	trmt12	99	56.897	Lepisosteus_oculatus
ENSSLDG00000025007	trmt12	96	51.332	ENSLAFG00000012519	TRMT12	94	51.332	Loxodonta_africana
ENSSLDG00000025007	trmt12	96	51.332	ENSMMUG00000015490	TRMT12	93	51.332	Macaca_mulatta
ENSSLDG00000025007	trmt12	99	78.960	ENSMAMG00000020311	trmt12	99	78.960	Mastacembelus_armatus
ENSSLDG00000025007	trmt12	100	78.519	ENSMZEG00005007349	trmt12	100	78.519	Maylandia_zebra
ENSSLDG00000025007	trmt12	99	50.000	ENSMGAG00000004174	TRMT12	95	50.000	Meleagris_gallopavo
ENSSLDG00000025007	trmt12	99	77.475	ENSMMOG00000000412	trmt12	99	77.475	Mola_mola
ENSSLDG00000025007	trmt12	96	52.250	ENSMODG00000021403	-	92	52.250	Monodelphis_domestica
ENSSLDG00000025007	trmt12	98	50.614	ENSMODG00000011798	-	85	50.614	Monodelphis_domestica
ENSSLDG00000025007	trmt12	100	82.469	ENSMALG00000008668	trmt12	100	82.469	Monopterus_albus
ENSSLDG00000025007	trmt12	96	50.000	MGP_CAROLIEiJ_G0019820	Trmt12	93	50.000	Mus_caroli
ENSSLDG00000025007	trmt12	96	50.971	ENSMUSG00000037085	Trmt12	92	50.971	Mus_musculus
ENSSLDG00000025007	trmt12	96	51.456	MGP_PahariEiJ_G0019829	Trmt12	93	51.456	Mus_pahari
ENSSLDG00000025007	trmt12	96	50.485	MGP_SPRETEiJ_G0020717	Trmt12	92	50.485	Mus_spretus
ENSSLDG00000025007	trmt12	96	51.332	ENSMPUG00000019150	TRMT12	93	51.332	Mustela_putorius_furo
ENSSLDG00000025007	trmt12	96	50.605	ENSMLUG00000003753	TRMT12	94	50.605	Myotis_lucifugus
ENSSLDG00000025007	trmt12	97	49.275	ENSNGAG00000014548	Trmt12	95	49.275	Nannospalax_galili
ENSSLDG00000025007	trmt12	100	76.355	ENSNBRG00000021510	trmt12	100	76.355	Neolamprologus_brichardi
ENSSLDG00000025007	trmt12	96	47.330	ENSOPRG00000008067	TRMT12	92	47.330	Ochotona_princeps
ENSSLDG00000025007	trmt12	99	50.824	ENSODEG00000018933	TRMT12	97	50.824	Octodon_degus
ENSSLDG00000025007	trmt12	100	80.494	ENSONIG00000002614	trmt12	100	80.494	Oreochromis_niloticus
ENSSLDG00000025007	trmt12	96	46.929	ENSOANG00000009987	TRMT12	95	46.929	Ornithorhynchus_anatinus
ENSSLDG00000025007	trmt12	96	46.860	ENSOCUG00000026379	TRMT12	92	46.860	Oryctolagus_cuniculus
ENSSLDG00000025007	trmt12	100	73.333	ENSORLG00000001280	trmt12	100	73.333	Oryzias_latipes
ENSSLDG00000025007	trmt12	100	73.086	ENSORLG00020000708	trmt12	100	73.086	Oryzias_latipes_hni
ENSSLDG00000025007	trmt12	100	73.086	ENSORLG00015012344	trmt12	100	73.086	Oryzias_latipes_hsok
ENSSLDG00000025007	trmt12	100	72.346	ENSOMEG00000015267	trmt12	98	72.346	Oryzias_melastigma
ENSSLDG00000025007	trmt12	97	50.966	ENSOGAG00000015845	TRMT12	94	50.966	Otolemur_garnettii
ENSSLDG00000025007	trmt12	99	60.891	ENSPKIG00000004640	trmt12	99	61.026	Paramormyrops_kingsleyae
ENSSLDG00000025007	trmt12	59	60.223	ENSPSIG00000003476	TRMT12	99	60.223	Pelodiscus_sinensis
ENSSLDG00000025007	trmt12	99	65.347	ENSPMGG00000016356	trmt12	97	65.347	Periophthalmus_magnuspinnatus
ENSSLDG00000025007	trmt12	96	53.250	ENSPCIG00000002967	TRMT12	85	53.250	Phascolarctos_cinereus
ENSSLDG00000025007	trmt12	98	72.796	ENSPFOG00000016931	trmt12	97	72.796	Poecilia_formosa
ENSSLDG00000025007	trmt12	100	74.321	ENSPLAG00000020621	trmt12	100	74.321	Poecilia_latipinna
ENSSLDG00000025007	trmt12	100	75.556	ENSPMEG00000000818	trmt12	100	75.556	Poecilia_mexicana
ENSSLDG00000025007	trmt12	100	75.556	ENSPREG00000011621	trmt12	100	75.556	Poecilia_reticulata
ENSSLDG00000025007	trmt12	96	51.816	ENSPPYG00000018866	TRMT12	92	51.816	Pongo_abelii
ENSSLDG00000025007	trmt12	97	51.449	ENSPCAG00000000556	TRMT12	93	51.449	Procavia_capensis
ENSSLDG00000025007	trmt12	96	50.363	ENSPVAG00000009149	TRMT12	93	50.363	Pteropus_vampyrus
ENSSLDG00000025007	trmt12	96	78.295	ENSPNYG00000010696	trmt12	100	78.295	Pundamilia_nyererei
ENSSLDG00000025007	trmt12	99	58.711	ENSPNAG00000019028	trmt12	99	58.711	Pygocentrus_nattereri
ENSSLDG00000025007	trmt12	96	50.485	ENSRNOG00000008978	Trmt12	94	50.485	Rattus_norvegicus
ENSSLDG00000025007	trmt12	96	50.750	ENSSHAG00000003345	TRMT12	92	50.750	Sarcophilus_harrisii
ENSSLDG00000025007	trmt12	99	55.502	ENSSFOG00015006090	trmt12	99	55.502	Scleropages_formosus
ENSSLDG00000025007	trmt12	99	84.406	ENSSMAG00000013247	trmt12	99	84.406	Scophthalmus_maximus
ENSSLDG00000025007	trmt12	100	97.037	ENSSDUG00000006168	trmt12	100	97.037	Seriola_dumerili
ENSSLDG00000025007	trmt12	97	51.896	ENSSPUG00000005321	TRMT12	93	51.896	Sphenodon_punctatus
ENSSLDG00000025007	trmt12	100	83.951	ENSSPAG00000009435	trmt12	97	83.951	Stegastes_partitus
ENSSLDG00000025007	trmt12	99	48.921	ENSTGUG00000002280	TRMT12	99	49.640	Taeniopygia_guttata
ENSSLDG00000025007	trmt12	99	74.074	ENSTRUG00000011548	trmt12	99	74.074	Takifugu_rubripes
ENSSLDG00000025007	trmt12	99	70.516	ENSTNIG00000016866	trmt12	99	70.516	Tetraodon_nigroviridis
ENSSLDG00000025007	trmt12	96	50.847	ENSUAMG00000002067	TRMT12	95	50.847	Ursus_americanus
ENSSLDG00000025007	trmt12	96	51.090	ENSVPAG00000006519	TRMT12	93	51.090	Vicugna_pacos
ENSSLDG00000025007	trmt12	96	50.363	ENSVVUG00000016790	TRMT12	93	50.363	Vulpes_vulpes
ENSSLDG00000025007	trmt12	99	52.109	ENSXETG00000009641	trmt12	95	52.109	Xenopus_tropicalis
ENSSLDG00000025007	trmt12	100	73.710	ENSXCOG00000016505	trmt12	100	73.710	Xiphophorus_couchianus
ENSSLDG00000025007	trmt12	100	74.384	ENSXMAG00000025318	trmt12	100	74.384	Xiphophorus_maculatus