EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000025040 (Gene tree)
Gene ID: -
Gene Symbol: stau1
Alias: fi67e05|wu:fi67e05|zgc:77271
Full Name: staufen double-stranded RNA binding protein 1
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 11901 bases
Position: chrPEQF01099001.1:1973550-1985450
Accession: 111660732
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000032653	dsrm	PF00035.26	4.1e-47	1	4
ENSSLDP00000032653	dsrm	PF00035.26	4.1e-47	2	4
ENSSLDP00000032653	dsrm	PF00035.26	4.1e-47	3	4
ENSSLDP00000032653	dsrm	PF00035.26	4.1e-47	4	4
ENSSLDP00000032645	dsrm	PF00035.26	6.2e-47	1	4
ENSSLDP00000032645	dsrm	PF00035.26	6.2e-47	2	4
ENSSLDP00000032645	dsrm	PF00035.26	6.2e-47	3	4
ENSSLDP00000032645	dsrm	PF00035.26	6.2e-47	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000033575	-	7109	-	ENSSLDP00000032653	650 (aa)	-	-
ENSSLDT00000033567	-	7232	XM_023414112	ENSSLDP00000032645	691 (aa)	XP_023269880	UPI000C6FA128

Gene Model

Click here to download ENSSLDG00000025040's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000025040's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000025040	stau1	89	50.749	ENSSLDG00000007156	stau2	99	49.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000025040	stau1	93	72.948	ENSG00000124214	STAU1	99	75.649	Homo_sapiens
ENSSLDG00000025040	stau1	100	96.671	ENSAPOG00000017260	stau1	100	96.671	Acanthochromis_polyacanthus
ENSSLDG00000025040	stau1	96	71.343	ENSAMEG00000013681	STAU1	95	71.343	Ailuropoda_melanoleuca
ENSSLDG00000025040	stau1	100	93.488	ENSACIG00000015918	stau1	100	94.501	Amphilophus_citrinellus
ENSSLDG00000025040	stau1	100	97.540	ENSAOCG00000012224	stau1	100	97.540	Amphiprion_ocellaris
ENSSLDG00000025040	stau1	100	97.540	ENSAPEG00000012308	stau1	100	97.540	Amphiprion_percula
ENSSLDG00000025040	stau1	100	96.115	ENSATEG00000024600	stau1	100	96.115	Anabas_testudineus
ENSSLDG00000025040	stau1	99	71.271	ENSAPLG00000010527	STAU1	97	72.923	Anas_platyrhynchos
ENSSLDG00000025040	stau1	99	73.371	ENSACAG00000015909	STAU1	96	74.963	Anolis_carolinensis
ENSSLDG00000025040	stau1	93	71.956	ENSANAG00000032714	STAU1	99	71.058	Aotus_nancymaae
ENSSLDG00000025040	stau1	100	94.388	ENSACLG00000012270	stau1	100	94.388	Astatotilapia_calliptera
ENSSLDG00000025040	stau1	96	80.827	ENSAMXG00000016812	stau1	98	80.827	Astyanax_mexicanus
ENSSLDG00000025040	stau1	93	72.388	ENSBTAG00000000241	STAU1	95	72.388	Bos_taurus
ENSSLDG00000025040	stau1	93	72.761	ENSCJAG00000016233	STAU1	95	72.761	Callithrix_jacchus
ENSSLDG00000025040	stau1	93	72.298	ENSCAFG00000011347	STAU1	96	72.298	Canis_familiaris
ENSSLDG00000025040	stau1	93	72.298	ENSCAFG00020017123	STAU1	99	73.779	Canis_lupus_dingo
ENSSLDG00000025040	stau1	93	71.828	ENSCHIG00000001799	-	99	67.944	Capra_hircus
ENSSLDG00000025040	stau1	93	72.779	ENSTSYG00000036179	-	95	72.779	Carlito_syrichta
ENSSLDG00000025040	stau1	72	74.052	ENSCAPG00000017041	STAU1	99	73.852	Cavia_aperea
ENSSLDG00000025040	stau1	71	72.200	ENSCPOG00000005566	STAU1	99	72.200	Cavia_porcellus
ENSSLDG00000025040	stau1	93	71.956	ENSCCAG00000034339	STAU1	95	71.956	Cebus_capucinus
ENSSLDG00000025040	stau1	93	76.824	ENSCATG00000028474	STAU1	99	74.753	Cercocebus_atys
ENSSLDG00000025040	stau1	71	75.400	ENSCLAG00000006516	-	99	75.400	Chinchilla_lanigera
ENSSLDG00000025040	stau1	71	61.647	ENSCLAG00000002784	-	99	61.647	Chinchilla_lanigera
ENSSLDG00000025040	stau1	72	75.848	ENSCSAG00000014986	STAU1	99	75.848	Chlorocebus_sabaeus
ENSSLDG00000025040	stau1	93	73.184	ENSCHOG00000001511	STAU1	95	73.184	Choloepus_hoffmanni
ENSSLDG00000025040	stau1	99	73.050	ENSCPBG00000026741	STAU1	97	74.633	Chrysemys_picta_bellii
ENSSLDG00000025040	stau1	93	73.134	ENSCANG00000039220	STAU1	95	73.134	Colobus_angolensis_palliatus
ENSSLDG00000025040	stau1	71	71.200	ENSCGRG00001013453	Stau1	99	71.200	Cricetulus_griseus_chok1gshd
ENSSLDG00000025040	stau1	71	71.200	ENSCGRG00000007216	Stau1	99	71.200	Cricetulus_griseus_crigri
ENSSLDG00000025040	stau1	100	79.718	ENSCSEG00000000792	stau1	100	80.704	Cynoglossus_semilaevis
ENSSLDG00000025040	stau1	96	82.739	ENSCVAG00000005906	stau1	100	84.053	Cyprinodon_variegatus
ENSSLDG00000025040	stau1	100	81.385	ENSDARG00000044182	stau1	100	81.476	Danio_rerio
ENSSLDG00000025040	stau1	93	73.184	ENSDNOG00000014933	STAU1	93	72.998	Dasypus_novemcinctus
ENSSLDG00000025040	stau1	71	74.089	ENSDORG00000030220	Stau1	99	74.089	Dipodomys_ordii
ENSSLDG00000025040	stau1	67	77.152	ENSETEG00000018235	STAU1	82	77.152	Echinops_telfairi
ENSSLDG00000025040	stau1	96	71.196	ENSEASG00005023343	STAU1	96	73.190	Equus_asinus_asinus
ENSSLDG00000025040	stau1	93	73.725	ENSECAG00000012894	STAU1	98	73.057	Equus_caballus
ENSSLDG00000025040	stau1	65	78.426	ENSEEUG00000014344	STAU1	68	78.426	Erinaceus_europaeus
ENSSLDG00000025040	stau1	99	84.659	ENSELUG00000002529	stau1	99	86.094	Esox_lucius
ENSSLDG00000025040	stau1	93	73.547	ENSFCAG00000001447	STAU1	96	73.547	Felis_catus
ENSSLDG00000025040	stau1	99	73.000	ENSFALG00000012940	STAU1	97	74.408	Ficedula_albicollis
ENSSLDG00000025040	stau1	72	56.886	ENSFDAG00000020837	-	99	55.489	Fukomys_damarensis
ENSSLDG00000025040	stau1	71	74.600	ENSFDAG00000014119	-	99	74.600	Fukomys_damarensis
ENSSLDG00000025040	stau1	99	90.346	ENSFHEG00000013517	stau1	99	90.346	Fundulus_heteroclitus
ENSSLDG00000025040	stau1	100	74.474	ENSGMOG00000016850	stau1	100	74.053	Gadus_morhua
ENSSLDG00000025040	stau1	99	73.504	ENSGALG00000004736	STAU1	97	75.296	Gallus_gallus
ENSSLDG00000025040	stau1	99	91.066	ENSGAFG00000010437	stau1	100	90.935	Gambusia_affinis
ENSSLDG00000025040	stau1	100	93.497	ENSGACG00000001352	stau1	100	93.497	Gasterosteus_aculeatus
ENSSLDG00000025040	stau1	99	73.820	ENSGAGG00000009825	STAU1	97	75.444	Gopherus_agassizii
ENSSLDG00000025040	stau1	93	67.890	ENSGGOG00000025351	STAU1	99	78.297	Gorilla_gorilla
ENSSLDG00000025040	stau1	100	94.532	ENSHBUG00000023668	stau1	100	94.532	Haplochromis_burtoni
ENSSLDG00000025040	stau1	71	76.113	ENSHGLG00000008730	STAU1	99	76.113	Heterocephalus_glaber_female
ENSSLDG00000025040	stau1	71	76.113	ENSHGLG00100000098	STAU1	99	76.113	Heterocephalus_glaber_male
ENSSLDG00000025040	stau1	100	86.494	ENSHCOG00000018461	stau1	100	86.494	Hippocampus_comes
ENSSLDG00000025040	stau1	100	77.424	ENSIPUG00000023725	stau1	100	77.135	Ictalurus_punctatus
ENSSLDG00000025040	stau1	71	74.899	ENSSTOG00000003634	STAU1	99	74.899	Ictidomys_tridecemlineatus
ENSSLDG00000025040	stau1	71	74.089	ENSJJAG00000020032	Stau1	99	74.089	Jaculus_jaculus
ENSSLDG00000025040	stau1	99	88.567	ENSKMAG00000007135	stau1	99	89.146	Kryptolebias_marmoratus
ENSSLDG00000025040	stau1	100	94.356	ENSLBEG00000020172	stau1	100	94.356	Labrus_bergylta
ENSSLDG00000025040	stau1	100	71.625	ENSLACG00000016157	STAU1	96	73.466	Latimeria_chalumnae
ENSSLDG00000025040	stau1	99	78.674	ENSLOCG00000003134	stau1	100	78.993	Lepisosteus_oculatus
ENSSLDG00000025040	stau1	74	75.292	ENSLAFG00000003238	STAU1	99	75.292	Loxodonta_africana
ENSSLDG00000025040	stau1	93	76.824	ENSMFAG00000040931	STAU1	99	78.519	Macaca_fascicularis
ENSSLDG00000025040	stau1	93	67.706	ENSMMUG00000002302	STAU1	99	78.519	Macaca_mulatta
ENSSLDG00000025040	stau1	93	75.847	ENSMNEG00000033821	STAU1	99	74.753	Macaca_nemestrina
ENSSLDG00000025040	stau1	93	72.948	ENSMLEG00000031383	STAU1	95	72.948	Mandrillus_leucophaeus
ENSSLDG00000025040	stau1	100	96.816	ENSMAMG00000017586	stau1	100	97.134	Mastacembelus_armatus
ENSSLDG00000025040	stau1	100	94.380	ENSMZEG00005015605	stau1	100	94.380	Maylandia_zebra
ENSSLDG00000025040	stau1	99	71.271	ENSMGAG00000004719	STAU1	97	72.923	Meleagris_gallopavo
ENSSLDG00000025040	stau1	71	71.200	ENSMAUG00000013846	Stau1	99	71.200	Mesocricetus_auratus
ENSSLDG00000025040	stau1	93	71.033	ENSMICG00000001995	STAU1	95	71.033	Microcebus_murinus
ENSSLDG00000025040	stau1	71	71.600	ENSMOCG00000018743	Stau1	99	71.600	Microtus_ochrogaster
ENSSLDG00000025040	stau1	100	91.027	ENSMMOG00000015455	stau1	100	91.027	Mola_mola
ENSSLDG00000025040	stau1	96	73.739	ENSMODG00000016276	STAU1	96	75.734	Monodelphis_domestica
ENSSLDG00000025040	stau1	100	95.369	ENSMALG00000000045	stau1	100	95.369	Monopterus_albus
ENSSLDG00000025040	stau1	71	72.301	MGP_CAROLIEiJ_G0024699	Stau1	100	72.301	Mus_caroli
ENSSLDG00000025040	stau1	71	72.098	ENSMUSG00000039536	Stau1	100	72.098	Mus_musculus
ENSSLDG00000025040	stau1	71	71.660	MGP_PahariEiJ_G0026141	Stau1	99	71.660	Mus_pahari
ENSSLDG00000025040	stau1	71	71.894	MGP_SPRETEiJ_G0025619	Stau1	100	71.894	Mus_spretus
ENSSLDG00000025040	stau1	92	73.561	ENSMPUG00000017581	STAU1	95	73.561	Mustela_putorius_furo
ENSSLDG00000025040	stau1	93	71.828	ENSMLUG00000008407	STAU1	93	71.828	Myotis_lucifugus
ENSSLDG00000025040	stau1	71	72.600	ENSNGAG00000007108	Stau1	99	72.600	Nannospalax_galili
ENSSLDG00000025040	stau1	100	94.532	ENSNBRG00000017596	stau1	100	94.532	Neolamprologus_brichardi
ENSSLDG00000025040	stau1	93	72.761	ENSNLEG00000006955	STAU1	99	74.556	Nomascus_leucogenys
ENSSLDG00000025040	stau1	67	79.437	ENSMEUG00000003263	STAU1	80	79.437	Notamacropus_eugenii
ENSSLDG00000025040	stau1	77	71.375	ENSOPRG00000014569	STAU1	93	71.375	Ochotona_princeps
ENSSLDG00000025040	stau1	72	75.250	ENSODEG00000006523	STAU1	99	75.250	Octodon_degus
ENSSLDG00000025040	stau1	100	91.748	ENSONIG00000004152	stau1	99	91.748	Oreochromis_niloticus
ENSSLDG00000025040	stau1	96	73.746	ENSOANG00000006394	STAU1	96	73.638	Ornithorhynchus_anatinus
ENSSLDG00000025040	stau1	93	72.626	ENSOCUG00000006214	STAU1	95	72.626	Oryctolagus_cuniculus
ENSSLDG00000025040	stau1	99	89.420	ENSOMEG00000002388	stau1	99	89.420	Oryzias_melastigma
ENSSLDG00000025040	stau1	72	52.695	ENSOGAG00000028222	-	99	52.200	Otolemur_garnettii
ENSSLDG00000025040	stau1	93	73.535	ENSOGAG00000002127	STAU1	93	73.535	Otolemur_garnettii
ENSSLDG00000025040	stau1	93	72.798	ENSOARG00000012204	STAU1	96	72.798	Ovis_aries
ENSSLDG00000025040	stau1	93	67.706	ENSPPAG00000032023	STAU1	99	78.297	Pan_paniscus
ENSSLDG00000025040	stau1	93	73.507	ENSPPRG00000003436	STAU1	99	76.048	Panthera_pardus
ENSSLDG00000025040	stau1	93	73.507	ENSPTIG00000011768	STAU1	99	75.394	Panthera_tigris_altaica
ENSSLDG00000025040	stau1	93	67.706	ENSPTRG00000023130	STAU1	99	78.297	Pan_troglodytes
ENSSLDG00000025040	stau1	93	76.824	ENSPANG00000020560	STAU1	95	76.824	Papio_anubis
ENSSLDG00000025040	stau1	100	80.599	ENSPKIG00000024588	stau1	100	81.000	Paramormyrops_kingsleyae
ENSSLDG00000025040	stau1	99	74.106	ENSPSIG00000010731	STAU1	96	75.740	Pelodiscus_sinensis
ENSSLDG00000025040	stau1	99	87.213	ENSPMGG00000018553	stau1	100	87.088	Periophthalmus_magnuspinnatus
ENSSLDG00000025040	stau1	71	71.600	ENSPEMG00000022045	Stau1	99	71.600	Peromyscus_maniculatus_bairdii
ENSSLDG00000025040	stau1	99	71.550	ENSPCIG00000023269	STAU1	98	75.969	Phascolarctos_cinereus
ENSSLDG00000025040	stau1	100	89.368	ENSPFOG00000017253	stau1	100	89.368	Poecilia_formosa
ENSSLDG00000025040	stau1	61	87.032	ENSPLAG00000014829	stau1	97	83.805	Poecilia_latipinna
ENSSLDG00000025040	stau1	99	85.755	ENSPMEG00000007495	stau1	99	85.755	Poecilia_mexicana
ENSSLDG00000025040	stau1	100	89.799	ENSPREG00000003477	stau1	100	89.799	Poecilia_reticulata
ENSSLDG00000025040	stau1	93	72.812	ENSPPYG00000011111	STAU1	95	72.812	Pongo_abelii
ENSSLDG00000025040	stau1	73	66.270	ENSPCAG00000002459	STAU1	95	66.270	Procavia_capensis
ENSSLDG00000025040	stau1	93	72.201	ENSPCOG00000027746	STAU1	99	73.964	Propithecus_coquereli
ENSSLDG00000025040	stau1	66	79.139	ENSPVAG00000015019	STAU1	86	79.139	Pteropus_vampyrus
ENSSLDG00000025040	stau1	100	94.532	ENSPNYG00000014436	stau1	100	94.532	Pundamilia_nyererei
ENSSLDG00000025040	stau1	100	81.151	ENSPNAG00000011323	stau1	100	81.871	Pygocentrus_nattereri
ENSSLDG00000025040	stau1	71	71.200	ENSRNOG00000007781	Stau1	99	71.200	Rattus_norvegicus
ENSSLDG00000025040	stau1	72	75.100	ENSRBIG00000037345	STAU1	100	74.900	Rhinopithecus_bieti
ENSSLDG00000025040	stau1	93	75.847	ENSRROG00000039008	STAU1	99	74.802	Rhinopithecus_roxellana
ENSSLDG00000025040	stau1	93	71.956	ENSSBOG00000034448	STAU1	99	71.937	Saimiri_boliviensis_boliviensis
ENSSLDG00000025040	stau1	96	74.440	ENSSHAG00000009492	STAU1	96	75.580	Sarcophilus_harrisii
ENSSLDG00000025040	stau1	100	81.923	ENSSFOG00015021497	stau1	100	81.609	Scleropages_formosus
ENSSLDG00000025040	stau1	100	95.658	ENSSMAG00000017410	stau1	100	95.658	Scophthalmus_maximus
ENSSLDG00000025040	stau1	100	99.566	ENSSDUG00000019439	stau1	100	99.566	Seriola_dumerili
ENSSLDG00000025040	stau1	99	73.513	ENSSPUG00000017983	STAU1	96	75.994	Sphenodon_punctatus
ENSSLDG00000025040	stau1	100	98.698	ENSSPAG00000019275	stau1	100	98.698	Stegastes_partitus
ENSSLDG00000025040	stau1	93	72.761	ENSSSCG00000027444	STAU1	99	75.449	Sus_scrofa
ENSSLDG00000025040	stau1	100	70.621	ENSTGUG00000008784	STAU1	97	72.000	Taeniopygia_guttata
ENSSLDG00000025040	stau1	100	90.504	ENSTRUG00000005837	stau1	100	91.079	Takifugu_rubripes
ENSSLDG00000025040	stau1	97	88.296	ENSTNIG00000014732	stau1	99	88.296	Tetraodon_nigroviridis
ENSSLDG00000025040	stau1	96	62.197	ENSTBEG00000009404	STAU1	99	62.197	Tupaia_belangeri
ENSSLDG00000025040	stau1	67	74.675	ENSTTRG00000004285	STAU1	80	74.675	Tursiops_truncatus
ENSSLDG00000025040	stau1	72	74.016	ENSUAMG00000025449	STAU1	99	74.016	Ursus_americanus
ENSSLDG00000025040	stau1	58	71.354	ENSUMAG00000024475	STAU1	89	71.354	Ursus_maritimus
ENSSLDG00000025040	stau1	93	72.761	ENSVPAG00000001313	STAU1	95	72.761	Vicugna_pacos
ENSSLDG00000025040	stau1	93	72.451	ENSVVUG00000022325	STAU1	96	72.451	Vulpes_vulpes
ENSSLDG00000025040	stau1	96	71.958	ENSXETG00000001783	stau1	96	71.704	Xenopus_tropicalis
ENSSLDG00000025040	stau1	57	87.399	ENSXCOG00000008804	stau1	94	86.059	Xiphophorus_couchianus
ENSSLDG00000025040	stau1	99	90.346	ENSXMAG00000016175	stau1	99	90.346	Xiphophorus_maculatus