EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000025056 (Gene tree)
Gene ID: -
Gene Symbol: zc3hc1
Alias: zgc:154099
Full Name: zinc finger C3HC-type containing 1
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 5366 bases
Position: chrPEQF01099244.1:36346-41711
Accession: 111668890
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000032668	zf-C3HC	PF07967.13	2.8e-35	1	1
ENSSLDP00000032668	Rsm1	PF08600.10	9.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000033590	-	2867	XM_023425040	ENSSLDP00000032668	510 (aa)	XP_023280808	UPI000C6F65FA

Gene Model

Click here to download ENSSLDG00000025056's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000025056's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000025056	zc3hc1	93	44.219	ENSG00000091732	ZC3HC1	95	44.807	Homo_sapiens
ENSSLDG00000025056	zc3hc1	98	86.228	ENSAPOG00000009078	zc3hc1	100	86.228	Acanthochromis_polyacanthus
ENSSLDG00000025056	zc3hc1	93	44.848	ENSAMEG00000005425	ZC3HC1	95	45.436	Ailuropoda_melanoleuca
ENSSLDG00000025056	zc3hc1	98	84.095	ENSACIG00000019513	zc3hc1	100	84.095	Amphilophus_citrinellus
ENSSLDG00000025056	zc3hc1	98	85.030	ENSAOCG00000024310	zc3hc1	100	85.828	Amphiprion_ocellaris
ENSSLDG00000025056	zc3hc1	98	84.631	ENSAPEG00000004907	zc3hc1	100	85.429	Amphiprion_percula
ENSSLDG00000025056	zc3hc1	85	85.484	ENSATEG00000016898	zc3hc1	90	85.484	Anabas_testudineus
ENSSLDG00000025056	zc3hc1	85	43.274	ENSAPLG00000003832	ZC3HC1	96	44.619	Anas_platyrhynchos
ENSSLDG00000025056	zc3hc1	94	42.545	ENSACAG00000001638	ZC3HC1	95	42.545	Anolis_carolinensis
ENSSLDG00000025056	zc3hc1	93	42.222	ENSANAG00000022213	ZC3HC1	95	42.799	Aotus_nancymaae
ENSSLDG00000025056	zc3hc1	89	86.404	ENSACLG00000025033	zc3hc1	99	86.404	Astatotilapia_calliptera
ENSSLDG00000025056	zc3hc1	93	53.797	ENSAMXG00000036792	zc3hc1	97	53.797	Astyanax_mexicanus
ENSSLDG00000025056	zc3hc1	93	45.030	ENSBTAG00000011247	ZC3HC1	95	45.418	Bos_taurus
ENSSLDG00000025056	zc3hc1	93	44.266	ENSCJAG00000010536	ZC3HC1	95	44.848	Callithrix_jacchus
ENSSLDG00000025056	zc3hc1	93	44.828	ENSCAFG00000028735	-	95	45.010	Canis_familiaris
ENSSLDG00000025056	zc3hc1	93	44.960	ENSCAFG00000001499	-	93	45.142	Canis_familiaris
ENSSLDG00000025056	zc3hc1	93	44.828	ENSCAFG00000029401	-	93	45.010	Canis_familiaris
ENSSLDG00000025056	zc3hc1	93	45.233	ENSCAFG00000031850	-	95	45.418	Canis_familiaris
ENSSLDG00000025056	zc3hc1	93	45.030	ENSCAFG00020006829	-	95	45.214	Canis_lupus_dingo
ENSSLDG00000025056	zc3hc1	93	44.040	ENSCAFG00020023333	-	95	44.219	Canis_lupus_dingo
ENSSLDG00000025056	zc3hc1	93	40.081	ENSCHIG00000014103	ZC3HC1	94	40.650	Capra_hircus
ENSSLDG00000025056	zc3hc1	93	43.825	ENSTSYG00000002843	ZC3HC1	95	44.400	Carlito_syrichta
ENSSLDG00000025056	zc3hc1	84	38.514	ENSCAPG00000016300	ZC3HC1	94	38.242	Cavia_aperea
ENSSLDG00000025056	zc3hc1	94	44.200	ENSCPOG00000014034	ZC3HC1	95	47.059	Cavia_porcellus
ENSSLDG00000025056	zc3hc1	93	32.200	ENSCCAG00000020384	ZC3HC1	98	38.235	Cebus_capucinus
ENSSLDG00000025056	zc3hc1	93	43.813	ENSCATG00000023130	ZC3HC1	95	44.399	Cercocebus_atys
ENSSLDG00000025056	zc3hc1	94	32.377	ENSCLAG00000008260	ZC3HC1	94	31.902	Chinchilla_lanigera
ENSSLDG00000025056	zc3hc1	71	41.161	ENSCSAG00000009881	ZC3HC1	96	41.910	Chlorocebus_sabaeus
ENSSLDG00000025056	zc3hc1	85	47.556	ENSCHOG00000011846	ZC3HC1	95	47.545	Choloepus_hoffmanni
ENSSLDG00000025056	zc3hc1	94	45.272	ENSCPBG00000017519	ZC3HC1	96	45.070	Chrysemys_picta_bellii
ENSSLDG00000025056	zc3hc1	93	44.016	ENSCANG00000029091	ZC3HC1	95	44.603	Colobus_angolensis_palliatus
ENSSLDG00000025056	zc3hc1	93	45.010	ENSCGRG00001018805	Zc3hc1	94	47.147	Cricetulus_griseus_chok1gshd
ENSSLDG00000025056	zc3hc1	93	43.992	ENSCGRG00000017114	Zc3hc1	95	43.992	Cricetulus_griseus_crigri
ENSSLDG00000025056	zc3hc1	99	76.621	ENSCSEG00000009284	zc3hc1	99	76.621	Cynoglossus_semilaevis
ENSSLDG00000025056	zc3hc1	97	74.044	ENSCVAG00000011566	zc3hc1	99	74.044	Cyprinodon_variegatus
ENSSLDG00000025056	zc3hc1	98	62.376	ENSDARG00000062651	zc3hc1	100	62.376	Danio_rerio
ENSSLDG00000025056	zc3hc1	92	43.621	ENSDNOG00000045016	ZC3HC1	94	43.827	Dasypus_novemcinctus
ENSSLDG00000025056	zc3hc1	94	42.857	ENSDORG00000008697	Zc3hc1	94	44.444	Dipodomys_ordii
ENSSLDG00000025056	zc3hc1	85	46.771	ENSEASG00005008789	ZC3HC1	92	47.875	Equus_asinus_asinus
ENSSLDG00000025056	zc3hc1	93	43.927	ENSECAG00000017886	ZC3HC1	95	44.512	Equus_caballus
ENSSLDG00000025056	zc3hc1	63	50.588	ENSEEUG00000003123	ZC3HC1	65	50.000	Erinaceus_europaeus
ENSSLDG00000025056	zc3hc1	97	62.205	ENSELUG00000023168	zc3hc1	99	62.992	Esox_lucius
ENSSLDG00000025056	zc3hc1	93	44.625	ENSFCAG00000010429	ZC3HC1	95	45.214	Felis_catus
ENSSLDG00000025056	zc3hc1	84	42.070	ENSFALG00000005006	ZC3HC1	94	42.070	Ficedula_albicollis
ENSSLDG00000025056	zc3hc1	94	43.400	ENSFDAG00000019897	ZC3HC1	93	47.706	Fukomys_damarensis
ENSSLDG00000025056	zc3hc1	97	75.202	ENSFHEG00000020149	zc3hc1	99	75.202	Fundulus_heteroclitus
ENSSLDG00000025056	zc3hc1	97	66.532	ENSGMOG00000002914	zc3hc1	99	66.532	Gadus_morhua
ENSSLDG00000025056	zc3hc1	92	42.742	ENSGALG00000008003	ZC3HC1	95	42.742	Gallus_gallus
ENSSLDG00000025056	zc3hc1	97	77.621	ENSGAFG00000016095	zc3hc1	99	77.621	Gambusia_affinis
ENSSLDG00000025056	zc3hc1	97	80.885	ENSGACG00000019706	zc3hc1	100	80.885	Gasterosteus_aculeatus
ENSSLDG00000025056	zc3hc1	76	43.000	ENSGAGG00000016106	ZC3HC1	99	44.500	Gopherus_agassizii
ENSSLDG00000025056	zc3hc1	93	44.422	ENSGGOG00000015504	ZC3HC1	95	45.010	Gorilla_gorilla
ENSSLDG00000025056	zc3hc1	98	85.400	ENSHBUG00000008347	zc3hc1	100	85.400	Haplochromis_burtoni
ENSSLDG00000025056	zc3hc1	93	44.625	ENSHGLG00000005085	ZC3HC1	95	45.621	Heterocephalus_glaber_female
ENSSLDG00000025056	zc3hc1	93	44.715	ENSHGLG00100011395	ZC3HC1	95	45.714	Heterocephalus_glaber_male
ENSSLDG00000025056	zc3hc1	98	70.800	ENSHCOG00000014309	zc3hc1	100	71.400	Hippocampus_comes
ENSSLDG00000025056	zc3hc1	93	43.002	ENSSTOG00000023599	-	95	43.585	Ictidomys_tridecemlineatus
ENSSLDG00000025056	zc3hc1	98	79.359	ENSKMAG00000015315	zc3hc1	94	79.359	Kryptolebias_marmoratus
ENSSLDG00000025056	zc3hc1	98	78.571	ENSLBEG00000017325	zc3hc1	100	78.571	Labrus_bergylta
ENSSLDG00000025056	zc3hc1	78	44.131	ENSLACG00000013032	ZC3HC1	99	44.186	Latimeria_chalumnae
ENSSLDG00000025056	zc3hc1	97	54.207	ENSLOCG00000015963	zc3hc1	99	54.207	Lepisosteus_oculatus
ENSSLDG00000025056	zc3hc1	93	43.863	ENSLAFG00000001292	ZC3HC1	95	44.444	Loxodonta_africana
ENSSLDG00000025056	zc3hc1	93	44.016	ENSMFAG00000030176	ZC3HC1	93	47.516	Macaca_fascicularis
ENSSLDG00000025056	zc3hc1	93	42.915	ENSMMUG00000006155	ZC3HC1	97	42.246	Macaca_mulatta
ENSSLDG00000025056	zc3hc1	93	44.016	ENSMNEG00000011833	ZC3HC1	95	44.603	Macaca_nemestrina
ENSSLDG00000025056	zc3hc1	93	44.016	ENSMLEG00000027328	ZC3HC1	95	44.603	Mandrillus_leucophaeus
ENSSLDG00000025056	zc3hc1	98	87.425	ENSMAMG00000010691	zc3hc1	100	87.425	Mastacembelus_armatus
ENSSLDG00000025056	zc3hc1	98	85.200	ENSMZEG00005007142	zc3hc1	100	85.200	Maylandia_zebra
ENSSLDG00000025056	zc3hc1	92	40.918	ENSMGAG00000002977	ZC3HC1	95	40.792	Meleagris_gallopavo
ENSSLDG00000025056	zc3hc1	80	42.217	ENSMAUG00000017032	Zc3hc1	90	42.689	Mesocricetus_auratus
ENSSLDG00000025056	zc3hc1	93	43.813	ENSMICG00000009167	ZC3HC1	95	44.399	Microcebus_murinus
ENSSLDG00000025056	zc3hc1	93	44.689	ENSMOCG00000015239	Zc3hc1	94	47.214	Microtus_ochrogaster
ENSSLDG00000025056	zc3hc1	86	80.272	ENSMMOG00000002204	zc3hc1	99	80.272	Mola_mola
ENSSLDG00000025056	zc3hc1	93	34.442	ENSMODG00000014630	ZC3HC1	94	34.381	Monodelphis_domestica
ENSSLDG00000025056	zc3hc1	96	83.436	ENSMALG00000014447	zc3hc1	100	83.600	Monopterus_albus
ENSSLDG00000025056	zc3hc1	94	43.287	MGP_CAROLIEiJ_G0028183	Zc3hc1	95	45.970	Mus_caroli
ENSSLDG00000025056	zc3hc1	94	43.600	ENSMUSG00000039130	Zc3hc1	95	46.429	Mus_musculus
ENSSLDG00000025056	zc3hc1	94	40.323	MGP_PahariEiJ_G0021941	Zc3hc1	94	41.369	Mus_pahari
ENSSLDG00000025056	zc3hc1	95	43.513	MGP_SPRETEiJ_G0029183	Zc3hc1	96	46.291	Mus_spretus
ENSSLDG00000025056	zc3hc1	88	44.043	ENSMPUG00000005297	ZC3HC1	90	44.658	Mustela_putorius_furo
ENSSLDG00000025056	zc3hc1	93	44.355	ENSMLUG00000000063	-	95	44.332	Myotis_lucifugus
ENSSLDG00000025056	zc3hc1	66	40.563	ENSMLUG00000029228	-	98	40.510	Myotis_lucifugus
ENSSLDG00000025056	zc3hc1	94	44.153	ENSNGAG00000019014	Zc3hc1	95	44.586	Nannospalax_galili
ENSSLDG00000025056	zc3hc1	98	85.000	ENSNBRG00000004577	zc3hc1	100	85.000	Neolamprologus_brichardi
ENSSLDG00000025056	zc3hc1	92	43.232	ENSNLEG00000012698	ZC3HC1	94	44.603	Nomascus_leucogenys
ENSSLDG00000025056	zc3hc1	93	45.030	ENSMEUG00000011023	ZC3HC1	95	45.010	Notamacropus_eugenii
ENSSLDG00000025056	zc3hc1	94	42.315	ENSODEG00000014604	ZC3HC1	96	43.287	Octodon_degus
ENSSLDG00000025056	zc3hc1	98	84.800	ENSONIG00000011644	zc3hc1	100	84.800	Oreochromis_niloticus
ENSSLDG00000025056	zc3hc1	86	40.938	ENSOANG00000011460	ZC3HC1	96	40.899	Ornithorhynchus_anatinus
ENSSLDG00000025056	zc3hc1	93	44.355	ENSOCUG00000017137	ZC3HC1	95	44.939	Oryctolagus_cuniculus
ENSSLDG00000025056	zc3hc1	96	77.079	ENSORLG00000014409	zc3hc1	99	76.740	Oryzias_latipes
ENSSLDG00000025056	zc3hc1	96	77.485	ENSORLG00020015874	zc3hc1	99	77.137	Oryzias_latipes_hni
ENSSLDG00000025056	zc3hc1	96	76.876	ENSORLG00015014641	zc3hc1	99	76.541	Oryzias_latipes_hsok
ENSSLDG00000025056	zc3hc1	97	78.138	ENSOMEG00000020604	zc3hc1	99	77.535	Oryzias_melastigma
ENSSLDG00000025056	zc3hc1	97	77.935	ENSOMEG00000000215	zc3hc1	99	77.336	Oryzias_melastigma
ENSSLDG00000025056	zc3hc1	93	38.742	ENSOGAG00000026193	ZC3HC1	95	39.715	Otolemur_garnettii
ENSSLDG00000025056	zc3hc1	93	44.153	ENSOARG00000004907	ZC3HC1	93	44.737	Ovis_aries
ENSSLDG00000025056	zc3hc1	93	44.219	ENSPPAG00000043172	ZC3HC1	95	44.807	Pan_paniscus
ENSSLDG00000025056	zc3hc1	93	44.219	ENSPPRG00000001004	ZC3HC1	95	44.807	Panthera_pardus
ENSSLDG00000025056	zc3hc1	93	44.422	ENSPTIG00000007823	ZC3HC1	95	45.010	Panthera_tigris_altaica
ENSSLDG00000025056	zc3hc1	93	44.016	ENSPTRG00000019685	ZC3HC1	95	44.603	Pan_troglodytes
ENSSLDG00000025056	zc3hc1	93	42.915	ENSPANG00000014229	ZC3HC1	91	47.516	Papio_anubis
ENSSLDG00000025056	zc3hc1	97	54.207	ENSPKIG00000007172	zc3hc1	99	54.207	Paramormyrops_kingsleyae
ENSSLDG00000025056	zc3hc1	85	43.450	ENSPSIG00000016646	ZC3HC1	87	42.516	Pelodiscus_sinensis
ENSSLDG00000025056	zc3hc1	93	68.399	ENSPMGG00000003548	zc3hc1	95	68.607	Periophthalmus_magnuspinnatus
ENSSLDG00000025056	zc3hc1	93	42.740	ENSPEMG00000000514	Zc3hc1	94	46.246	Peromyscus_maniculatus_bairdii
ENSSLDG00000025056	zc3hc1	93	42.159	ENSPCIG00000020619	ZC3HC1	99	44.000	Phascolarctos_cinereus
ENSSLDG00000025056	zc3hc1	97	77.419	ENSPFOG00000003466	zc3hc1	99	77.419	Poecilia_formosa
ENSSLDG00000025056	zc3hc1	97	77.419	ENSPLAG00000022211	zc3hc1	99	77.419	Poecilia_latipinna
ENSSLDG00000025056	zc3hc1	97	77.419	ENSPMEG00000001458	zc3hc1	99	77.419	Poecilia_mexicana
ENSSLDG00000025056	zc3hc1	97	77.621	ENSPREG00000004004	zc3hc1	99	77.621	Poecilia_reticulata
ENSSLDG00000025056	zc3hc1	93	41.414	ENSPPYG00000017998	ZC3HC1	95	41.988	Pongo_abelii
ENSSLDG00000025056	zc3hc1	85	45.434	ENSPCAG00000001182	ZC3HC1	94	46.085	Procavia_capensis
ENSSLDG00000025056	zc3hc1	93	43.813	ENSPCOG00000017354	ZC3HC1	95	43.788	Propithecus_coquereli
ENSSLDG00000025056	zc3hc1	93	41.837	ENSPVAG00000003195	ZC3HC1	95	42.041	Pteropus_vampyrus
ENSSLDG00000025056	zc3hc1	98	85.200	ENSPNYG00000020692	zc3hc1	100	85.200	Pundamilia_nyererei
ENSSLDG00000025056	zc3hc1	96	53.846	ENSPNAG00000020746	zc3hc1	100	53.846	Pygocentrus_nattereri
ENSSLDG00000025056	zc3hc1	93	42.915	ENSRNOG00000010154	Zc3hc1	95	42.886	Rattus_norvegicus
ENSSLDG00000025056	zc3hc1	85	45.880	ENSRBIG00000029409	ZC3HC1	91	51.079	Rhinopithecus_bieti
ENSSLDG00000025056	zc3hc1	93	43.611	ENSRROG00000041831	ZC3HC1	95	44.196	Rhinopithecus_roxellana
ENSSLDG00000025056	zc3hc1	75	51.754	ENSSBOG00000032787	ZC3HC1	94	51.754	Saimiri_boliviensis_boliviensis
ENSSLDG00000025056	zc3hc1	85	46.000	ENSSHAG00000002529	ZC3HC1	93	45.982	Sarcophilus_harrisii
ENSSLDG00000025056	zc3hc1	97	55.273	ENSSFOG00015003667	zc3hc1	95	55.273	Scleropages_formosus
ENSSLDG00000025056	zc3hc1	99	84.252	ENSSMAG00000000647	zc3hc1	92	85.433	Scophthalmus_maximus
ENSSLDG00000025056	zc3hc1	100	98.824	ENSSDUG00000004241	zc3hc1	100	98.824	Seriola_dumerili
ENSSLDG00000025056	zc3hc1	94	39.961	ENSSARG00000012013	ZC3HC1	96	40.396	Sorex_araneus
ENSSLDG00000025056	zc3hc1	80	40.281	ENSSPUG00000000778	ZC3HC1	81	40.330	Sphenodon_punctatus
ENSSLDG00000025056	zc3hc1	98	87.425	ENSSPAG00000020041	zc3hc1	100	87.425	Stegastes_partitus
ENSSLDG00000025056	zc3hc1	93	43.713	ENSSSCG00000016565	ZC3HC1	99	44.750	Sus_scrofa
ENSSLDG00000025056	zc3hc1	97	69.014	ENSTRUG00000020077	zc3hc1	99	69.014	Takifugu_rubripes
ENSSLDG00000025056	zc3hc1	97	70.800	ENSTNIG00000007585	zc3hc1	99	71.670	Tetraodon_nigroviridis
ENSSLDG00000025056	zc3hc1	94	36.747	ENSTBEG00000005216	ZC3HC1	96	37.097	Tupaia_belangeri
ENSSLDG00000025056	zc3hc1	93	44.939	ENSTTRG00000008458	ZC3HC1	99	44.919	Tursiops_truncatus
ENSSLDG00000025056	zc3hc1	93	45.030	ENSUAMG00000020249	ZC3HC1	95	45.621	Ursus_americanus
ENSSLDG00000025056	zc3hc1	93	44.828	ENSUMAG00000009268	ZC3HC1	95	45.418	Ursus_maritimus
ENSSLDG00000025056	zc3hc1	62	42.236	ENSVPAG00000010846	ZC3HC1	61	43.168	Vicugna_pacos
ENSSLDG00000025056	zc3hc1	88	45.532	ENSVVUG00000012386	ZC3HC1	94	45.726	Vulpes_vulpes
ENSSLDG00000025056	zc3hc1	89	40.506	ENSXETG00000033900	zc3hc1	95	41.263	Xenopus_tropicalis
ENSSLDG00000025056	zc3hc1	97	74.798	ENSXCOG00000013570	zc3hc1	99	74.798	Xiphophorus_couchianus
ENSSLDG00000025056	zc3hc1	89	78.587	ENSXMAG00000010979	zc3hc1	98	78.587	Xiphophorus_maculatus