EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000025159 (Gene tree)
Gene ID: -
Gene Symbol: gatc
Alias: si:rp71-1c23.3
Full Name: glutamyl-tRNA amidotransferase subunit C
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 2684 bases
Position: chrPEQF01098996.1:530057-532740
Accession: 111660358
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000032827	Glu-tRNAGln	PF02686.15	2.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000033751	-	1641	XM_023413607	ENSSLDP00000032827	198 (aa)	XP_023269375	UPI000C6FBD79

Gene Model

Click here to download ENSSLDG00000025159's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000025159's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000025159	gatc	51	64.356	ENSG00000257218	GATC	100	74.468	Homo_sapiens
ENSSLDG00000025159	gatc	51	62.376	ENSAMEG00000013298	-	74	62.376	Ailuropoda_melanoleuca
ENSSLDG00000025159	gatc	62	90.244	ENSAOCG00000014641	gatc	98	90.244	Amphiprion_ocellaris
ENSSLDG00000025159	gatc	98	75.385	ENSAPEG00000023411	gatc	100	75.385	Amphiprion_percula
ENSSLDG00000025159	gatc	53	67.308	ENSACAG00000002868	-	77	67.308	Anolis_carolinensis
ENSSLDG00000025159	gatc	51	65.347	ENSANAG00000034389	-	74	65.347	Aotus_nancymaae
ENSSLDG00000025159	gatc	98	72.308	ENSACLG00000026251	gatc	100	72.308	Astatotilapia_calliptera
ENSSLDG00000025159	gatc	67	76.515	ENSAMXG00000004252	gatc	69	67.500	Astyanax_mexicanus
ENSSLDG00000025159	gatc	51	60.396	ENSBTAG00000012791	GATC	74	60.396	Bos_taurus
ENSSLDG00000025159	gatc	59	36.752	WBGene00013433	Y66D12A.7	67	36.752	Caenorhabditis_elegans
ENSSLDG00000025159	gatc	51	65.347	ENSCJAG00000001183	-	55	65.347	Callithrix_jacchus
ENSSLDG00000025159	gatc	51	63.366	ENSCAFG00000010311	-	74	63.366	Canis_familiaris
ENSSLDG00000025159	gatc	51	63.366	ENSCAFG00020020606	-	74	63.366	Canis_lupus_dingo
ENSSLDG00000025159	gatc	54	57.944	ENSCHIG00000019423	-	79	57.944	Capra_hircus
ENSSLDG00000025159	gatc	51	64.356	ENSTSYG00000006845	-	74	64.356	Carlito_syrichta
ENSSLDG00000025159	gatc	51	65.347	ENSCCAG00000022235	-	74	65.347	Cebus_capucinus
ENSSLDG00000025159	gatc	51	64.356	ENSCATG00000038807	GATC	74	64.356	Cercocebus_atys
ENSSLDG00000025159	gatc	73	50.694	ENSCLAG00000011015	-	85	50.694	Chinchilla_lanigera
ENSSLDG00000025159	gatc	51	65.347	ENSCSAG00000002259	GATC	74	65.347	Chlorocebus_sabaeus
ENSSLDG00000025159	gatc	51	63.366	ENSCHOG00000009235	-	74	63.366	Choloepus_hoffmanni
ENSSLDG00000025159	gatc	65	59.375	ENSCPBG00000011342	-	68	59.375	Chrysemys_picta_bellii
ENSSLDG00000025159	gatc	51	64.356	ENSCANG00000031071	GATC	74	64.356	Colobus_angolensis_palliatus
ENSSLDG00000025159	gatc	65	54.264	ENSCGRG00001019220	-	83	54.264	Cricetulus_griseus_chok1gshd
ENSSLDG00000025159	gatc	65	54.264	ENSCGRG00000004184	-	83	54.264	Cricetulus_griseus_crigri
ENSSLDG00000025159	gatc	97	55.440	ENSCSEG00000016618	-	99	55.440	Cynoglossus_semilaevis
ENSSLDG00000025159	gatc	97	64.767	ENSCSEG00000007798	gatc	93	64.767	Cynoglossus_semilaevis
ENSSLDG00000025159	gatc	97	69.948	ENSCVAG00000004364	gatc	100	69.948	Cyprinodon_variegatus
ENSSLDG00000025159	gatc	93	59.459	ENSDARG00000056855	gatc	98	59.459	Danio_rerio
ENSSLDG00000025159	gatc	70	51.299	ENSDNOG00000012593	-	81	51.299	Dasypus_novemcinctus
ENSSLDG00000025159	gatc	68	41.045	FBgn0064115	GatC	90	41.045	Drosophila_melanogaster
ENSSLDG00000025159	gatc	50	55.556	ENSETEG00000002604	-	73	55.556	Echinops_telfairi
ENSSLDG00000025159	gatc	56	60.909	ENSECAG00000011118	-	74	65.347	Equus_caballus
ENSSLDG00000025159	gatc	51	59.000	ENSEEUG00000011638	-	74	59.000	Erinaceus_europaeus
ENSSLDG00000025159	gatc	68	70.290	ENSELUG00000012608	gatc	75	81.553	Esox_lucius
ENSSLDG00000025159	gatc	51	62.376	ENSFCAG00000038718	-	74	62.376	Felis_catus
ENSSLDG00000025159	gatc	57	58.929	ENSFALG00000007564	-	74	58.929	Ficedula_albicollis
ENSSLDG00000025159	gatc	55	63.889	ENSFDAG00000018720	-	79	63.889	Fukomys_damarensis
ENSSLDG00000025159	gatc	96	71.204	ENSFHEG00000014992	GATC	99	71.204	Fundulus_heteroclitus
ENSSLDG00000025159	gatc	81	63.975	ENSGMOG00000008742	gatc	99	63.975	Gadus_morhua
ENSSLDG00000025159	gatc	54	59.434	ENSGALG00000007195	-	80	58.929	Gallus_gallus
ENSSLDG00000025159	gatc	65	78.125	ENSGAFG00000012801	gatc	81	78.125	Gambusia_affinis
ENSSLDG00000025159	gatc	98	71.282	ENSGACG00000008973	gatc	100	71.282	Gasterosteus_aculeatus
ENSSLDG00000025159	gatc	65	60.938	ENSGAGG00000016018	-	70	60.938	Gopherus_agassizii
ENSSLDG00000025159	gatc	98	73.333	ENSHBUG00000006827	gatc	100	73.333	Haplochromis_burtoni
ENSSLDG00000025159	gatc	55	63.889	ENSHGLG00000011394	GATC	79	63.889	Heterocephalus_glaber_female
ENSSLDG00000025159	gatc	55	62.037	ENSHGLG00100018850	-	78	62.037	Heterocephalus_glaber_male
ENSSLDG00000025159	gatc	65	81.250	ENSHCOG00000009209	gatc	100	81.250	Hippocampus_comes
ENSSLDG00000025159	gatc	65	75.969	ENSIPUG00000023072	gatc	60	75.969	Ictalurus_punctatus
ENSSLDG00000025159	gatc	51	63.366	ENSSTOG00000025740	-	66	63.366	Ictidomys_tridecemlineatus
ENSSLDG00000025159	gatc	66	77.692	ENSKMAG00000016476	gatc	100	77.692	Kryptolebias_marmoratus
ENSSLDG00000025159	gatc	98	69.231	ENSLBEG00000007603	gatc	100	69.231	Labrus_bergylta
ENSSLDG00000025159	gatc	66	55.725	ENSLACG00000018239	-	68	55.725	Latimeria_chalumnae
ENSSLDG00000025159	gatc	83	60.976	ENSLOCG00000004056	gatc	79	60.976	Lepisosteus_oculatus
ENSSLDG00000025159	gatc	51	64.356	ENSMFAG00000034197	GATC	74	64.356	Macaca_fascicularis
ENSSLDG00000025159	gatc	51	64.356	ENSMMUG00000046665	GATC	74	64.356	Macaca_mulatta
ENSSLDG00000025159	gatc	51	64.356	ENSMNEG00000034653	GATC	74	64.356	Macaca_nemestrina
ENSSLDG00000025159	gatc	51	65.347	ENSMLEG00000039862	GATC	74	65.347	Mandrillus_leucophaeus
ENSSLDG00000025159	gatc	98	72.308	ENSMAMG00000015851	gatc	100	72.308	Mastacembelus_armatus
ENSSLDG00000025159	gatc	98	72.308	ENSMZEG00005016072	gatc	100	72.308	Maylandia_zebra
ENSSLDG00000025159	gatc	54	60.377	ENSMGAG00000008733	-	100	60.377	Meleagris_gallopavo
ENSSLDG00000025159	gatc	63	55.556	ENSMAUG00000012756	Gatc	81	55.556	Mesocricetus_auratus
ENSSLDG00000025159	gatc	51	65.347	ENSMICG00000008669	-	74	65.347	Microcebus_murinus
ENSSLDG00000025159	gatc	59	81.197	ENSMMOG00000017695	gatc	92	82.727	Mola_mola
ENSSLDG00000025159	gatc	69	51.471	ENSMODG00000003152	-	95	51.471	Monodelphis_domestica
ENSSLDG00000025159	gatc	63	56.589	ENSMUSG00000029536	Gatc	81	56.589	Mus_musculus
ENSSLDG00000025159	gatc	63	55.814	MGP_SPRETEiJ_G0028621	Gatc	81	55.814	Mus_spretus
ENSSLDG00000025159	gatc	51	63.366	ENSMPUG00000003183	-	74	63.366	Mustela_putorius_furo
ENSSLDG00000025159	gatc	98	73.846	ENSNBRG00000007810	gatc	100	73.846	Neolamprologus_brichardi
ENSSLDG00000025159	gatc	53	62.857	ENSNLEG00000015651	GATC	77	62.857	Nomascus_leucogenys
ENSSLDG00000025159	gatc	53	60.577	ENSMEUG00000004064	-	84	60.577	Notamacropus_eugenii
ENSSLDG00000025159	gatc	51	66.000	ENSOPRG00000004226	-	74	66.000	Ochotona_princeps
ENSSLDG00000025159	gatc	65	85.496	ENSONIG00000013444	gatc	90	85.496	Oreochromis_niloticus
ENSSLDG00000025159	gatc	53	63.462	ENSOCUG00000009867	-	76	63.462	Oryctolagus_cuniculus
ENSSLDG00000025159	gatc	61	81.818	ENSORLG00000007156	gatc	100	81.818	Oryzias_latipes
ENSSLDG00000025159	gatc	98	66.667	ENSORLG00020014991	gatc	100	66.667	Oryzias_latipes_hni
ENSSLDG00000025159	gatc	98	66.154	ENSORLG00015003450	gatc	100	66.154	Oryzias_latipes_hsok
ENSSLDG00000025159	gatc	98	63.452	ENSOMEG00000002280	gatc	100	63.452	Oryzias_melastigma
ENSSLDG00000025159	gatc	53	62.857	ENSOGAG00000003850	-	96	62.857	Otolemur_garnettii
ENSSLDG00000025159	gatc	60	54.032	ENSOARG00000012338	-	96	54.032	Ovis_aries
ENSSLDG00000025159	gatc	51	63.366	ENSPPAG00000029164	GATC	74	63.366	Pan_paniscus
ENSSLDG00000025159	gatc	51	62.376	ENSPPRG00000000929	-	74	62.376	Panthera_pardus
ENSSLDG00000025159	gatc	51	62.376	ENSPTIG00000009889	-	74	62.376	Panthera_tigris_altaica
ENSSLDG00000025159	gatc	51	63.366	ENSPTRG00000049887	GATC	75	63.366	Pan_troglodytes
ENSSLDG00000025159	gatc	51	63.366	ENSPANG00000033975	GATC	74	63.366	Papio_anubis
ENSSLDG00000025159	gatc	96	53.886	ENSPKIG00000024856	gatc	96	53.886	Paramormyrops_kingsleyae
ENSSLDG00000025159	gatc	56	63.063	ENSPSIG00000011112	-	95	63.063	Pelodiscus_sinensis
ENSSLDG00000025159	gatc	64	81.746	ENSPMGG00000018829	gatc	80	81.746	Periophthalmus_magnuspinnatus
ENSSLDG00000025159	gatc	96	68.947	ENSPFOG00000011603	gatc	98	68.947	Poecilia_formosa
ENSSLDG00000025159	gatc	96	68.421	ENSPLAG00000002471	gatc	98	68.421	Poecilia_latipinna
ENSSLDG00000025159	gatc	96	68.421	ENSPMEG00000020958	gatc	98	68.421	Poecilia_mexicana
ENSSLDG00000025159	gatc	56	88.288	ENSPREG00000022256	gatc	75	88.288	Poecilia_reticulata
ENSSLDG00000025159	gatc	55	62.963	ENSPPYG00000005030	GATC	79	62.963	Pongo_abelii
ENSSLDG00000025159	gatc	51	63.366	ENSPCAG00000013864	-	74	63.366	Procavia_capensis
ENSSLDG00000025159	gatc	98	73.333	ENSPNYG00000016015	gatc	100	73.333	Pundamilia_nyererei
ENSSLDG00000025159	gatc	79	64.557	ENSPNAG00000001239	gatc	69	64.331	Pygocentrus_nattereri
ENSSLDG00000025159	gatc	51	63.366	ENSRBIG00000033363	GATC	74	63.366	Rhinopithecus_bieti
ENSSLDG00000025159	gatc	51	63.366	ENSRROG00000042802	GATC	74	63.366	Rhinopithecus_roxellana
ENSSLDG00000025159	gatc	51	63.366	ENSSBOG00000033750	-	74	63.366	Saimiri_boliviensis_boliviensis
ENSSLDG00000025159	gatc	54	59.434	ENSSHAG00000005745	-	100	59.434	Sarcophilus_harrisii
ENSSLDG00000025159	gatc	78	57.962	ENSSFOG00015002508	gatc	97	57.962	Scleropages_formosus
ENSSLDG00000025159	gatc	98	77.949	ENSSMAG00000014280	gatc	100	77.949	Scophthalmus_maximus
ENSSLDG00000025159	gatc	98	97.436	ENSSDUG00000012206	gatc	100	97.436	Seriola_dumerili
ENSSLDG00000025159	gatc	61	57.025	ENSSPUG00000015693	-	93	55.469	Sphenodon_punctatus
ENSSLDG00000025159	gatc	98	76.923	ENSSPAG00000011860	gatc	100	76.923	Stegastes_partitus
ENSSLDG00000025159	gatc	58	61.404	ENSSSCG00000032747	-	80	61.404	Sus_scrofa
ENSSLDG00000025159	gatc	54	62.617	ENSTGUG00000009561	-	99	62.617	Taeniopygia_guttata
ENSSLDG00000025159	gatc	98	63.590	ENSTRUG00000021596	gatc	96	63.590	Takifugu_rubripes
ENSSLDG00000025159	gatc	83	70.060	ENSTNIG00000015879	gatc	81	70.060	Tetraodon_nigroviridis
ENSSLDG00000025159	gatc	51	65.000	ENSTTRG00000000144	GATC	74	65.000	Tursiops_truncatus
ENSSLDG00000025159	gatc	51	63.366	ENSUAMG00000015523	-	74	63.366	Ursus_americanus
ENSSLDG00000025159	gatc	51	63.366	ENSVVUG00000021055	-	74	63.366	Vulpes_vulpes
ENSSLDG00000025159	gatc	56	87.387	ENSXCOG00000017087	gatc	81	87.387	Xiphophorus_couchianus
ENSSLDG00000025159	gatc	97	67.358	ENSXMAG00000018267	gatc	100	67.358	Xiphophorus_maculatus