EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000025283 (Gene tree)
Gene ID: -
Gene Symbol: prpf6
Alias: c20orf14|fc12b02|wu:fa05f07|wu:fc12b02|zgc:65913
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 11363 bases
Position: chrPEQF01099246.1:186684-198046
Accession: 111669029
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000033023	PRP1_N	PF06424.12	1.6e-57	1	1
ENSSLDP00000033017	PRP1_N	PF06424.12	1.9e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000033941	-	2954	XM_023425248	ENSSLDP00000033017	970 (aa)	XP_023281016	UPI000C6FB071
ENSSLDT00000033947	-	2700	-	ENSSLDP00000033023	899 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000025283's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000025283's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000025283	prpf6	100	88.842	ENSG00000101161	PRPF6	100	91.923	Homo_sapiens
ENSSLDG00000025283	prpf6	99	98.865	ENSAPOG00000010395	prpf6	100	98.865	Acanthochromis_polyacanthus
ENSSLDG00000025283	prpf6	100	88.217	ENSAMEG00000001916	PRPF6	99	91.295	Ailuropoda_melanoleuca
ENSSLDG00000025283	prpf6	99	98.039	ENSACIG00000019862	prpf6	100	98.039	Amphilophus_citrinellus
ENSSLDG00000025283	prpf6	99	98.968	ENSAOCG00000012988	prpf6	100	98.968	Amphiprion_ocellaris
ENSSLDG00000025283	prpf6	100	95.551	ENSAPEG00000008301	prpf6	100	95.551	Amphiprion_percula
ENSSLDG00000025283	prpf6	99	98.246	ENSATEG00000005581	prpf6	100	98.246	Anabas_testudineus
ENSSLDG00000025283	prpf6	100	89.160	ENSACAG00000006464	PRPF6	95	92.136	Anolis_carolinensis
ENSSLDG00000025283	prpf6	100	89.054	ENSANAG00000012661	PRPF6	100	92.933	Aotus_nancymaae
ENSSLDG00000025283	prpf6	99	98.039	ENSACLG00000025875	prpf6	100	98.039	Astatotilapia_calliptera
ENSSLDG00000025283	prpf6	97	94.597	ENSAMXG00000001929	prpf6	100	92.725	Astyanax_mexicanus
ENSSLDG00000025283	prpf6	100	89.267	ENSBTAG00000011656	PRPF6	100	92.242	Bos_taurus
ENSSLDG00000025283	prpf6	100	89.054	ENSCJAG00000010616	PRPF6	100	92.136	Callithrix_jacchus
ENSSLDG00000025283	prpf6	100	89.267	ENSCAFG00000013165	PRPF6	100	92.349	Canis_familiaris
ENSSLDG00000025283	prpf6	100	89.267	ENSCAFG00020002050	PRPF6	100	92.349	Canis_lupus_dingo
ENSSLDG00000025283	prpf6	100	89.267	ENSCHIG00000018187	PRPF6	100	92.242	Capra_hircus
ENSSLDG00000025283	prpf6	100	89.267	ENSTSYG00000007814	PRPF6	100	92.349	Carlito_syrichta
ENSSLDG00000025283	prpf6	97	88.332	ENSCAPG00000015077	PRPF6	100	91.058	Cavia_aperea
ENSSLDG00000025283	prpf6	100	89.692	ENSCPOG00000007518	PRPF6	100	92.774	Cavia_porcellus
ENSSLDG00000025283	prpf6	100	87.918	ENSCCAG00000024564	PRPF6	100	89.054	Cebus_capucinus
ENSSLDG00000025283	prpf6	100	88.948	ENSCATG00000037473	PRPF6	100	92.030	Cercocebus_atys
ENSSLDG00000025283	prpf6	100	85.972	ENSCLAG00000003854	PRPF6	100	88.948	Chinchilla_lanigera
ENSSLDG00000025283	prpf6	100	84.266	ENSCSAG00000016742	PRPF6	100	87.223	Chlorocebus_sabaeus
ENSSLDG00000025283	prpf6	81	77.886	ENSCHOG00000003315	-	98	77.686	Choloepus_hoffmanni
ENSSLDG00000025283	prpf6	100	89.574	ENSCPBG00000013964	PRPF6	96	92.660	Chrysemys_picta_bellii
ENSSLDG00000025283	prpf6	99	70.085	ENSCING00000008817	-	99	72.304	Ciona_intestinalis
ENSSLDG00000025283	prpf6	100	88.735	ENSCANG00000038230	PRPF6	100	91.817	Colobus_angolensis_palliatus
ENSSLDG00000025283	prpf6	100	89.692	ENSCGRG00001022666	Prpf6	100	92.774	Cricetulus_griseus_chok1gshd
ENSSLDG00000025283	prpf6	96	92.688	ENSCSEG00000018561	prpf6	100	92.688	Cynoglossus_semilaevis
ENSSLDG00000025283	prpf6	99	96.801	ENSCVAG00000010550	prpf6	100	96.801	Cyprinodon_variegatus
ENSSLDG00000025283	prpf6	99	92.828	ENSDARG00000091367	prpf6	100	94.386	Danio_rerio
ENSSLDG00000025283	prpf6	100	89.054	ENSDNOG00000040544	PRPF6	100	92.030	Dasypus_novemcinctus
ENSSLDG00000025283	prpf6	91	88.785	ENSDORG00000005406	Prpf6	100	92.640	Dipodomys_ordii
ENSSLDG00000025283	prpf6	99	68.891	FBgn0036828	CG6841	99	71.613	Drosophila_melanogaster
ENSSLDG00000025283	prpf6	83	91.520	ENSETEG00000004447	PRPF6	85	91.520	Echinops_telfairi
ENSSLDG00000025283	prpf6	96	86.032	ENSEBUG00000008835	prpf6	100	85.608	Eptatretus_burgeri
ENSSLDG00000025283	prpf6	100	89.479	ENSEASG00005023115	PRPF6	100	92.455	Equus_asinus_asinus
ENSSLDG00000025283	prpf6	100	85.228	ENSECAG00000013983	PRPF6	100	88.204	Equus_caballus
ENSSLDG00000025283	prpf6	90	95.833	ENSEEUG00000000180	PRPF6	81	95.833	Erinaceus_europaeus
ENSSLDG00000025283	prpf6	97	95.334	ENSELUG00000001945	prpf6	94	95.334	Esox_lucius
ENSSLDG00000025283	prpf6	100	89.267	ENSFCAG00000001183	PRPF6	100	92.349	Felis_catus
ENSSLDG00000025283	prpf6	96	86.383	ENSFALG00000006046	-	97	86.660	Ficedula_albicollis
ENSSLDG00000025283	prpf6	100	89.373	ENSFALG00000010326	-	98	92.275	Ficedula_albicollis
ENSSLDG00000025283	prpf6	100	88.310	ENSFDAG00000006451	PRPF6	100	92.404	Fukomys_damarensis
ENSSLDG00000025283	prpf6	99	97.001	ENSFHEG00000000560	prpf6	99	97.001	Fundulus_heteroclitus
ENSSLDG00000025283	prpf6	97	94.380	ENSGMOG00000015622	prpf6	99	93.849	Gadus_morhua
ENSSLDG00000025283	prpf6	100	89.267	ENSGALG00000006001	PRPF6	100	92.349	Gallus_gallus
ENSSLDG00000025283	prpf6	99	92.673	ENSGAFG00000021109	prpf6	100	92.673	Gambusia_affinis
ENSSLDG00000025283	prpf6	97	96.292	ENSGACG00000002576	prpf6	100	96.292	Gasterosteus_aculeatus
ENSSLDG00000025283	prpf6	100	89.681	ENSGAGG00000008653	PRPF6	96	92.766	Gopherus_agassizii
ENSSLDG00000025283	prpf6	100	88.842	ENSGGOG00000016876	PRPF6	100	91.923	Gorilla_gorilla
ENSSLDG00000025283	prpf6	99	98.039	ENSHBUG00000004496	prpf6	100	98.039	Haplochromis_burtoni
ENSSLDG00000025283	prpf6	100	89.586	ENSHGLG00000009222	PRPF6	100	92.667	Heterocephalus_glaber_female
ENSSLDG00000025283	prpf6	97	89.422	ENSHGLG00100016600	PRPF6	100	92.585	Heterocephalus_glaber_male
ENSSLDG00000025283	prpf6	99	96.388	ENSHCOG00000011513	prpf6	100	96.388	Hippocampus_comes
ENSSLDG00000025283	prpf6	99	93.224	ENSIPUG00000004912	prpf6	100	93.121	Ictalurus_punctatus
ENSSLDG00000025283	prpf6	100	87.261	ENSSTOG00000002922	PRPF6	100	89.809	Ictidomys_tridecemlineatus
ENSSLDG00000025283	prpf6	100	89.692	ENSJJAG00000000836	Prpf6	100	92.774	Jaculus_jaculus
ENSSLDG00000025283	prpf6	99	97.730	ENSKMAG00000017800	prpf6	100	97.730	Kryptolebias_marmoratus
ENSSLDG00000025283	prpf6	99	97.317	ENSLBEG00000012582	prpf6	100	97.317	Labrus_bergylta
ENSSLDG00000025283	prpf6	100	90.957	ENSLOCG00000004827	prpf6	96	92.553	Lepisosteus_oculatus
ENSSLDG00000025283	prpf6	100	89.054	ENSLAFG00000005272	PRPF6	100	92.030	Loxodonta_africana
ENSSLDG00000025283	prpf6	100	88.735	ENSMFAG00000037542	PRPF6	100	91.817	Macaca_fascicularis
ENSSLDG00000025283	prpf6	100	87.514	ENSMMUG00000015558	PRPF6	98	93.414	Macaca_mulatta
ENSSLDG00000025283	prpf6	100	77.754	ENSMNEG00000045555	PRPF6	100	79.237	Macaca_nemestrina
ENSSLDG00000025283	prpf6	99	98.142	ENSMAMG00000010718	prpf6	100	98.142	Mastacembelus_armatus
ENSSLDG00000025283	prpf6	90	98.057	ENSMZEG00005026539	prpf6	100	98.057	Maylandia_zebra
ENSSLDG00000025283	prpf6	97	98.081	ENSMZEG00005015261	-	100	98.081	Maylandia_zebra
ENSSLDG00000025283	prpf6	97	89.313	ENSMGAG00000006634	PRPF6	100	92.475	Meleagris_gallopavo
ENSSLDG00000025283	prpf6	100	89.692	ENSMAUG00000013969	Prpf6	100	92.774	Mesocricetus_auratus
ENSSLDG00000025283	prpf6	84	91.849	ENSMICG00000017793	PRPF6	98	91.862	Microcebus_murinus
ENSSLDG00000025283	prpf6	100	89.586	ENSMOCG00000001701	Prpf6	100	92.667	Microtus_ochrogaster
ENSSLDG00000025283	prpf6	96	97.957	ENSMMOG00000020419	prpf6	100	97.957	Mola_mola
ENSSLDG00000025283	prpf6	99	91.574	ENSMODG00000017051	PRPF6	99	93.218	Monodelphis_domestica
ENSSLDG00000025283	prpf6	95	98.587	ENSMALG00000000089	prpf6	100	98.587	Monopterus_albus
ENSSLDG00000025283	prpf6	100	83.316	MGP_CAROLIEiJ_G0024814	Prpf6	100	96.296	Mus_caroli
ENSSLDG00000025283	prpf6	100	89.692	ENSMUSG00000002455	Prpf6	100	96.296	Mus_musculus
ENSSLDG00000025283	prpf6	100	89.692	MGP_PahariEiJ_G0026262	Prpf6	100	96.296	Mus_pahari
ENSSLDG00000025283	prpf6	100	89.692	MGP_SPRETEiJ_G0025741	Prpf6	100	96.296	Mus_spretus
ENSSLDG00000025283	prpf6	86	92.831	ENSMPUG00000008673	PRPF6	98	92.831	Mustela_putorius_furo
ENSSLDG00000025283	prpf6	100	89.798	ENSNGAG00000003365	Prpf6	100	92.880	Nannospalax_galili
ENSSLDG00000025283	prpf6	99	98.142	ENSNBRG00000015025	prpf6	100	98.142	Neolamprologus_brichardi
ENSSLDG00000025283	prpf6	100	88.735	ENSNLEG00000010208	PRPF6	100	91.817	Nomascus_leucogenys
ENSSLDG00000025283	prpf6	100	82.698	ENSMEUG00000009824	-	90	83.794	Notamacropus_eugenii
ENSSLDG00000025283	prpf6	100	83.741	ENSODEG00000004841	PRPF6	100	86.823	Octodon_degus
ENSSLDG00000025283	prpf6	99	98.246	ENSONIG00000017406	prpf6	100	98.246	Oreochromis_niloticus
ENSSLDG00000025283	prpf6	100	89.586	ENSOANG00000004920	PRPF6	100	92.667	Ornithorhynchus_anatinus
ENSSLDG00000025283	prpf6	99	87.339	ENSOCUG00000014151	PRPF6	100	90.451	Oryctolagus_cuniculus
ENSSLDG00000025283	prpf6	99	95.562	ENSORLG00000009592	prpf6	100	95.562	Oryzias_latipes
ENSSLDG00000025283	prpf6	99	95.666	ENSORLG00020001458	prpf6	100	95.666	Oryzias_latipes_hni
ENSSLDG00000025283	prpf6	99	95.666	ENSORLG00015018762	prpf6	100	95.666	Oryzias_latipes_hsok
ENSSLDG00000025283	prpf6	99	96.182	ENSOMEG00000012174	prpf6	100	96.182	Oryzias_melastigma
ENSSLDG00000025283	prpf6	100	82.166	ENSOGAG00000007573	PRPF6	100	85.350	Otolemur_garnettii
ENSSLDG00000025283	prpf6	98	91.127	ENSOARG00000008776	PRPF6	99	91.817	Ovis_aries
ENSSLDG00000025283	prpf6	100	88.842	ENSPPAG00000008686	PRPF6	100	91.923	Pan_paniscus
ENSSLDG00000025283	prpf6	100	89.267	ENSPPRG00000008497	PRPF6	100	92.349	Panthera_pardus
ENSSLDG00000025283	prpf6	97	89.095	ENSPTIG00000011184	PRPF6	97	92.257	Panthera_tigris_altaica
ENSSLDG00000025283	prpf6	100	88.842	ENSPTRG00000013765	PRPF6	100	91.923	Pan_troglodytes
ENSSLDG00000025283	prpf6	100	88.523	ENSPANG00000024135	PRPF6	100	91.605	Papio_anubis
ENSSLDG00000025283	prpf6	100	91.702	ENSPKIG00000005627	prpf6	99	94.574	Paramormyrops_kingsleyae
ENSSLDG00000025283	prpf6	90	92.744	ENSPSIG00000007717	PRPF6	100	92.290	Pelodiscus_sinensis
ENSSLDG00000025283	prpf6	99	95.361	ENSPMGG00000008925	prpf6	100	94.639	Periophthalmus_magnuspinnatus
ENSSLDG00000025283	prpf6	100	89.692	ENSPEMG00000016036	Prpf6	100	92.774	Peromyscus_maniculatus_bairdii
ENSSLDG00000025283	prpf6	98	86.938	ENSPMAG00000006144	prpf6	100	87.566	Petromyzon_marinus
ENSSLDG00000025283	prpf6	100	89.692	ENSPCIG00000017909	PRPF6	100	92.774	Phascolarctos_cinereus
ENSSLDG00000025283	prpf6	99	96.115	ENSPFOG00000006431	prpf6	99	96.115	Poecilia_formosa
ENSSLDG00000025283	prpf6	99	96.904	ENSPLAG00000005974	prpf6	100	96.904	Poecilia_latipinna
ENSSLDG00000025283	prpf6	99	97.110	ENSPMEG00000009977	prpf6	100	97.110	Poecilia_mexicana
ENSSLDG00000025283	prpf6	99	97.007	ENSPREG00000017993	prpf6	95	97.007	Poecilia_reticulata
ENSSLDG00000025283	prpf6	100	88.310	ENSPPYG00000011256	PRPF6	100	91.392	Pongo_abelii
ENSSLDG00000025283	prpf6	95	94.935	ENSPCAG00000006536	PRPF6	88	94.281	Procavia_capensis
ENSSLDG00000025283	prpf6	100	88.842	ENSPCOG00000016881	PRPF6	100	91.923	Propithecus_coquereli
ENSSLDG00000025283	prpf6	100	83.422	ENSPVAG00000014316	PRPF6	100	86.397	Pteropus_vampyrus
ENSSLDG00000025283	prpf6	99	84.394	ENSPNYG00000001939	prpf6	100	84.394	Pundamilia_nyererei
ENSSLDG00000025283	prpf6	99	93.545	ENSPNAG00000015606	prpf6	100	93.545	Pygocentrus_nattereri
ENSSLDG00000025283	prpf6	100	89.586	ENSRNOG00000051498	Prpf6	100	92.667	Rattus_norvegicus
ENSSLDG00000025283	prpf6	100	88.735	ENSRBIG00000043613	PRPF6	100	91.817	Rhinopithecus_bieti
ENSSLDG00000025283	prpf6	100	87.086	ENSRROG00000040969	PRPF6	98	92.042	Rhinopithecus_roxellana
ENSSLDG00000025283	prpf6	91	89.558	ENSSBOG00000020632	PRPF6	93	87.370	Saimiri_boliviensis_boliviensis
ENSSLDG00000025283	prpf6	100	89.692	ENSSHAG00000016810	PRPF6	100	92.774	Sarcophilus_harrisii
ENSSLDG00000025283	prpf6	99	91.828	ENSSFOG00015020859	prpf6	100	95.376	Scleropages_formosus
ENSSLDG00000025283	prpf6	99	97.110	ENSSMAG00000008112	prpf6	100	97.110	Scophthalmus_maximus
ENSSLDG00000025283	prpf6	99	100.000	ENSSDUG00000016142	prpf6	100	100.000	Seriola_dumerili
ENSSLDG00000025283	prpf6	90	91.373	ENSSPUG00000018260	PRPF6	100	90.919	Sphenodon_punctatus
ENSSLDG00000025283	prpf6	99	98.968	ENSSPAG00000015850	prpf6	100	98.968	Stegastes_partitus
ENSSLDG00000025283	prpf6	100	89.054	ENSSSCG00000029119	PRPF6	98	92.148	Sus_scrofa
ENSSLDG00000025283	prpf6	100	89.479	ENSTGUG00000007221	PRPF6	100	92.373	Taeniopygia_guttata
ENSSLDG00000025283	prpf6	99	97.110	ENSTRUG00000002920	prpf6	100	97.110	Takifugu_rubripes
ENSSLDG00000025283	prpf6	100	87.354	ENSTNIG00000017873	prpf6	100	91.073	Tetraodon_nigroviridis
ENSSLDG00000025283	prpf6	88	95.506	ENSTBEG00000005348	PRPF6	85	92.778	Tupaia_belangeri
ENSSLDG00000025283	prpf6	100	89.054	ENSTTRG00000013068	PRPF6	100	92.030	Tursiops_truncatus
ENSSLDG00000025283	prpf6	98	87.609	ENSUMAG00000021631	PRPF6	98	90.840	Ursus_maritimus
ENSSLDG00000025283	prpf6	100	89.267	ENSVVUG00000014948	PRPF6	100	92.349	Vulpes_vulpes
ENSSLDG00000025283	prpf6	98	91.137	ENSXETG00000012054	prpf6	97	92.128	Xenopus_tropicalis
ENSSLDG00000025283	prpf6	99	97.214	ENSXCOG00000008082	prpf6	100	97.214	Xiphophorus_couchianus
ENSSLDG00000025283	prpf6	99	97.214	ENSXMAG00000015581	prpf6	100	97.214	Xiphophorus_maculatus