EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000025345 (Gene tree)
Gene ID: -
Gene Symbol: ddx1
Alias: si:ch211-214k9.2|si:dkey-161f12.1
Full Name: DEAD-box helicase 1
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 8206 bases
Position: chrPEQF01099379.1:152350-160555
Accession: 111672737
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000033101	DEAD	PF00270.29	1.8e-73	1	1
ENSSLDP00000033108	DEAD	PF00270.29	3.3e-51	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000034025	-	3068	XM_023430285	ENSSLDP00000033101	740 (aa)	XP_023286053	UPI000C6FAA61
ENSSLDT00000034032	-	1980	-	ENSSLDP00000033108	659 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000025345's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000025345's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000025345	ddx1	53	37.705	ENSSLDG00000024131	ddx5	55	37.705
ENSSLDG00000025345	ddx1	57	45.098	ENSSLDG00000006167	ddx6	70	45.098
ENSSLDG00000025345	ddx1	58	43.333	ENSSLDG00000007608	-	69	43.333
ENSSLDG00000025345	ddx1	57	32.787	ENSSLDG00000004513	ddx28	64	32.787
ENSSLDG00000025345	ddx1	58	43.333	ENSSLDG00000000132	ddx61	68	43.333
ENSSLDG00000025345	ddx1	55	49.153	ENSSLDG00000018142	ddx47	58	49.153

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000025345	ddx1	100	84.054	ENSG00000079785	DDX1	100	84.054	Homo_sapiens
ENSSLDG00000025345	ddx1	100	92.162	ENSAPOG00000003166	ddx1	100	92.234	Acanthochromis_polyacanthus
ENSSLDG00000025345	ddx1	99	83.762	ENSAMEG00000001071	DDX1	99	83.762	Ailuropoda_melanoleuca
ENSSLDG00000025345	ddx1	100	91.351	ENSACIG00000017422	ddx1	100	91.958	Amphilophus_citrinellus
ENSSLDG00000025345	ddx1	87	92.683	ENSAOCG00000015436	ddx1	95	92.512	Amphiprion_ocellaris
ENSSLDG00000025345	ddx1	100	93.378	ENSAPEG00000007699	ddx1	100	93.460	Amphiprion_percula
ENSSLDG00000025345	ddx1	99	93.893	ENSATEG00000003965	ddx1	98	93.893	Anabas_testudineus
ENSSLDG00000025345	ddx1	100	84.409	ENSAPLG00000011093	DDX1	100	84.409	Anas_platyrhynchos
ENSSLDG00000025345	ddx1	94	85.100	ENSACAG00000011036	DDX1	99	85.100	Anolis_carolinensis
ENSSLDG00000025345	ddx1	100	84.324	ENSANAG00000037912	DDX1	100	84.324	Aotus_nancymaae
ENSSLDG00000025345	ddx1	100	92.868	ENSACLG00000008850	ddx1	100	92.868	Astatotilapia_calliptera
ENSSLDG00000025345	ddx1	100	89.865	ENSAMXG00000002100	ddx1	100	89.865	Astyanax_mexicanus
ENSSLDG00000025345	ddx1	100	84.730	ENSBTAG00000009906	DDX1	100	84.730	Bos_taurus
ENSSLDG00000025345	ddx1	98	46.739	WBGene00021938	Y55F3BR.1	98	46.739	Caenorhabditis_elegans
ENSSLDG00000025345	ddx1	100	84.595	ENSCJAG00000007076	DDX1	100	84.595	Callithrix_jacchus
ENSSLDG00000025345	ddx1	100	84.324	ENSCAFG00000003686	DDX1	100	84.324	Canis_familiaris
ENSSLDG00000025345	ddx1	100	84.324	ENSCAFG00020026083	DDX1	100	84.324	Canis_lupus_dingo
ENSSLDG00000025345	ddx1	100	84.595	ENSCHIG00000011046	DDX1	100	84.595	Capra_hircus
ENSSLDG00000025345	ddx1	100	84.459	ENSTSYG00000002477	-	100	84.459	Carlito_syrichta
ENSSLDG00000025345	ddx1	100	63.363	ENSTSYG00000037396	-	98	63.363	Carlito_syrichta
ENSSLDG00000025345	ddx1	97	68.274	ENSCAPG00000008906	-	93	68.274	Cavia_aperea
ENSSLDG00000025345	ddx1	68	83.267	ENSCPOG00000032467	-	100	83.267	Cavia_porcellus
ENSSLDG00000025345	ddx1	98	82.389	ENSCPOG00000009816	-	96	82.389	Cavia_porcellus
ENSSLDG00000025345	ddx1	100	84.324	ENSCCAG00000030085	DDX1	100	84.324	Cebus_capucinus
ENSSLDG00000025345	ddx1	100	83.919	ENSCATG00000033924	DDX1	100	83.919	Cercocebus_atys
ENSSLDG00000025345	ddx1	100	84.595	ENSCLAG00000005434	DDX1	100	84.595	Chinchilla_lanigera
ENSSLDG00000025345	ddx1	100	83.919	ENSCSAG00000007883	DDX1	100	83.919	Chlorocebus_sabaeus
ENSSLDG00000025345	ddx1	70	87.886	ENSCHOG00000002171	DDX1	70	87.886	Choloepus_hoffmanni
ENSSLDG00000025345	ddx1	99	78.940	ENSCPBG00000013330	DDX1	99	83.923	Chrysemys_picta_bellii
ENSSLDG00000025345	ddx1	100	65.550	ENSCING00000001176	-	100	65.554	Ciona_intestinalis
ENSSLDG00000025345	ddx1	98	61.676	ENSCSAVG00000003028	-	99	61.676	Ciona_savignyi
ENSSLDG00000025345	ddx1	100	83.919	ENSCANG00000031530	DDX1	100	83.919	Colobus_angolensis_palliatus
ENSSLDG00000025345	ddx1	100	83.784	ENSCGRG00001013025	Ddx1	100	83.784	Cricetulus_griseus_chok1gshd
ENSSLDG00000025345	ddx1	100	83.784	ENSCGRG00000000676	Ddx1	100	83.784	Cricetulus_griseus_crigri
ENSSLDG00000025345	ddx1	100	93.020	ENSCSEG00000002630	ddx1	100	93.020	Cynoglossus_semilaevis
ENSSLDG00000025345	ddx1	100	90.592	ENSCVAG00000020927	ddx1	100	90.872	Cyprinodon_variegatus
ENSSLDG00000025345	ddx1	100	88.108	ENSDARG00000032117	ddx1	100	88.283	Danio_rerio
ENSSLDG00000025345	ddx1	100	83.919	ENSDNOG00000006905	DDX1	100	83.919	Dasypus_novemcinctus
ENSSLDG00000025345	ddx1	100	83.919	ENSDORG00000012847	Ddx1	100	83.919	Dipodomys_ordii
ENSSLDG00000025345	ddx1	98	59.508	FBgn0015075	Ddx1	99	59.918	Drosophila_melanogaster
ENSSLDG00000025345	ddx1	99	78.101	ENSETEG00000014259	DDX1	100	75.811	Echinops_telfairi
ENSSLDG00000025345	ddx1	72	77.119	ENSEBUG00000009800	-	99	77.119	Eptatretus_burgeri
ENSSLDG00000025345	ddx1	100	84.324	ENSEASG00005009335	DDX1	92	84.324	Equus_asinus_asinus
ENSSLDG00000025345	ddx1	99	83.817	ENSECAG00000016396	DDX1	100	83.931	Equus_caballus
ENSSLDG00000025345	ddx1	88	83.019	ENSEEUG00000001606	DDX1	89	83.019	Erinaceus_europaeus
ENSSLDG00000025345	ddx1	100	87.584	ENSELUG00000006743	ddx1	100	87.619	Esox_lucius
ENSSLDG00000025345	ddx1	100	84.189	ENSFCAG00000004680	DDX1	100	84.189	Felis_catus
ENSSLDG00000025345	ddx1	100	85.000	ENSFALG00000008696	DDX1	100	85.000	Ficedula_albicollis
ENSSLDG00000025345	ddx1	100	83.919	ENSFDAG00000021305	DDX1	100	83.919	Fukomys_damarensis
ENSSLDG00000025345	ddx1	100	91.351	ENSFHEG00000008444	ddx1	100	91.417	Fundulus_heteroclitus
ENSSLDG00000025345	ddx1	100	87.079	ENSGMOG00000011300	ddx1	100	87.079	Gadus_morhua
ENSSLDG00000025345	ddx1	100	84.459	ENSGALG00000016461	DDX1	100	84.459	Gallus_gallus
ENSSLDG00000025345	ddx1	100	91.622	ENSGAFG00000004706	ddx1	100	91.622	Gambusia_affinis
ENSSLDG00000025345	ddx1	100	91.081	ENSGACG00000011162	ddx1	100	91.081	Gasterosteus_aculeatus
ENSSLDG00000025345	ddx1	100	84.595	ENSGAGG00000021020	DDX1	100	84.595	Gopherus_agassizii
ENSSLDG00000025345	ddx1	100	84.054	ENSGGOG00000012482	DDX1	100	84.054	Gorilla_gorilla
ENSSLDG00000025345	ddx1	100	93.108	ENSHBUG00000014069	ddx1	100	93.108	Haplochromis_burtoni
ENSSLDG00000025345	ddx1	100	83.919	ENSHGLG00000000801	DDX1	100	83.919	Heterocephalus_glaber_female
ENSSLDG00000025345	ddx1	99	83.924	ENSHGLG00100000711	DDX1	100	83.924	Heterocephalus_glaber_male
ENSSLDG00000025345	ddx1	100	91.622	ENSHCOG00000011492	ddx1	96	91.622	Hippocampus_comes
ENSSLDG00000025345	ddx1	100	88.378	ENSIPUG00000003494	ddx1	100	88.378	Ictalurus_punctatus
ENSSLDG00000025345	ddx1	99	84.060	ENSSTOG00000003977	DDX1	100	84.060	Ictidomys_tridecemlineatus
ENSSLDG00000025345	ddx1	99	79.542	ENSJJAG00000013315	Ddx1	100	79.542	Jaculus_jaculus
ENSSLDG00000025345	ddx1	100	93.243	ENSKMAG00000011340	ddx1	100	93.243	Kryptolebias_marmoratus
ENSSLDG00000025345	ddx1	100	88.485	ENSLBEG00000008692	ddx1	100	88.485	Labrus_bergylta
ENSSLDG00000025345	ddx1	100	83.784	ENSLACG00000010529	DDX1	100	83.784	Latimeria_chalumnae
ENSSLDG00000025345	ddx1	100	86.193	ENSLOCG00000016473	ddx1	100	86.193	Lepisosteus_oculatus
ENSSLDG00000025345	ddx1	99	85.210	ENSLAFG00000002213	DDX1	99	85.210	Loxodonta_africana
ENSSLDG00000025345	ddx1	100	83.919	ENSMFAG00000033987	DDX1	100	83.919	Macaca_fascicularis
ENSSLDG00000025345	ddx1	100	83.919	ENSMMUG00000023437	DDX1	100	83.919	Macaca_mulatta
ENSSLDG00000025345	ddx1	100	83.919	ENSMNEG00000029189	DDX1	100	83.919	Macaca_nemestrina
ENSSLDG00000025345	ddx1	100	83.919	ENSMLEG00000030787	DDX1	100	83.919	Mandrillus_leucophaeus
ENSSLDG00000025345	ddx1	100	93.919	ENSMAMG00000015916	ddx1	100	93.919	Mastacembelus_armatus
ENSSLDG00000025345	ddx1	100	92.868	ENSMZEG00005015207	ddx1	100	92.868	Maylandia_zebra
ENSSLDG00000025345	ddx1	99	80.623	ENSMGAG00000014025	DDX1	100	80.623	Meleagris_gallopavo
ENSSLDG00000025345	ddx1	64	92.727	ENSMAUG00000016156	Ddx1	100	92.727	Mesocricetus_auratus
ENSSLDG00000025345	ddx1	100	84.189	ENSMICG00000001023	DDX1	100	84.189	Microcebus_murinus
ENSSLDG00000025345	ddx1	100	83.784	ENSMOCG00000000257	Ddx1	100	83.784	Microtus_ochrogaster
ENSSLDG00000025345	ddx1	99	91.756	ENSMMOG00000015397	ddx1	99	91.756	Mola_mola
ENSSLDG00000025345	ddx1	99	85.346	ENSMODG00000010275	DDX1	99	85.346	Monodelphis_domestica
ENSSLDG00000025345	ddx1	100	93.243	ENSMALG00000016409	ddx1	100	93.243	Monopterus_albus
ENSSLDG00000025345	ddx1	100	83.919	MGP_CAROLIEiJ_G0017622	Ddx1	100	83.919	Mus_caroli
ENSSLDG00000025345	ddx1	100	84.054	ENSMUSG00000037149	Ddx1	100	84.054	Mus_musculus
ENSSLDG00000025345	ddx1	100	84.189	MGP_PahariEiJ_G0029378	Ddx1	100	84.189	Mus_pahari
ENSSLDG00000025345	ddx1	100	84.054	MGP_SPRETEiJ_G0018464	Ddx1	100	84.054	Mus_spretus
ENSSLDG00000025345	ddx1	100	84.054	ENSMPUG00000013606	DDX1	100	84.054	Mustela_putorius_furo
ENSSLDG00000025345	ddx1	99	84.103	ENSMLUG00000003027	DDX1	98	84.103	Myotis_lucifugus
ENSSLDG00000025345	ddx1	99	83.787	ENSNGAG00000015783	Ddx1	100	83.787	Nannospalax_galili
ENSSLDG00000025345	ddx1	88	90.051	ENSNBRG00000020677	ddx1	95	90.051	Neolamprologus_brichardi
ENSSLDG00000025345	ddx1	100	84.189	ENSNLEG00000014417	DDX1	100	84.189	Nomascus_leucogenys
ENSSLDG00000025345	ddx1	99	83.742	ENSMEUG00000008254	DDX1	99	83.174	Notamacropus_eugenii
ENSSLDG00000025345	ddx1	99	63.859	ENSOPRG00000004290	DDX1	100	60.000	Ochotona_princeps
ENSSLDG00000025345	ddx1	100	84.595	ENSODEG00000000569	DDX1	100	84.595	Octodon_degus
ENSSLDG00000025345	ddx1	100	93.657	ENSONIG00000000513	ddx1	100	93.657	Oreochromis_niloticus
ENSSLDG00000025345	ddx1	85	82.796	ENSOANG00000005450	DDX1	99	82.796	Ornithorhynchus_anatinus
ENSSLDG00000025345	ddx1	100	84.324	ENSOCUG00000007010	DDX1	100	84.324	Oryctolagus_cuniculus
ENSSLDG00000025345	ddx1	100	90.811	ENSORLG00000016709	ddx1	100	90.811	Oryzias_latipes
ENSSLDG00000025345	ddx1	99	90.736	ENSORLG00020003290	ddx1	100	90.736	Oryzias_latipes_hni
ENSSLDG00000025345	ddx1	100	90.405	ENSORLG00015022438	ddx1	100	90.463	Oryzias_latipes_hsok
ENSSLDG00000025345	ddx1	100	86.216	ENSOMEG00000017620	ddx1	100	86.216	Oryzias_melastigma
ENSSLDG00000025345	ddx1	99	84.103	ENSOGAG00000008730	DDX1	100	84.103	Otolemur_garnettii
ENSSLDG00000025345	ddx1	99	84.375	ENSOARG00000016369	DDX1	100	84.375	Ovis_aries
ENSSLDG00000025345	ddx1	100	83.919	ENSPPAG00000027432	DDX1	100	83.919	Pan_paniscus
ENSSLDG00000025345	ddx1	100	84.189	ENSPPRG00000020556	DDX1	100	84.189	Panthera_pardus
ENSSLDG00000025345	ddx1	100	84.054	ENSPTIG00000008267	DDX1	100	84.054	Panthera_tigris_altaica
ENSSLDG00000025345	ddx1	100	83.919	ENSPTRG00000011670	DDX1	100	83.919	Pan_troglodytes
ENSSLDG00000025345	ddx1	100	83.919	ENSPANG00000025185	DDX1	100	83.919	Papio_anubis
ENSSLDG00000025345	ddx1	100	86.081	ENSPKIG00000012466	ddx1	100	86.376	Paramormyrops_kingsleyae
ENSSLDG00000025345	ddx1	54	81.390	ENSPSIG00000012292	DDX1	100	81.390	Pelodiscus_sinensis
ENSSLDG00000025345	ddx1	100	90.405	ENSPMGG00000000782	ddx1	100	90.405	Periophthalmus_magnuspinnatus
ENSSLDG00000025345	ddx1	100	84.595	ENSPEMG00000016389	Ddx1	100	84.595	Peromyscus_maniculatus_bairdii
ENSSLDG00000025345	ddx1	99	78.261	ENSPMAG00000009118	-	100	78.261	Petromyzon_marinus
ENSSLDG00000025345	ddx1	100	85.946	ENSPCIG00000010941	DDX1	100	85.946	Phascolarctos_cinereus
ENSSLDG00000025345	ddx1	97	90.824	ENSPFOG00000006873	-	100	90.824	Poecilia_formosa
ENSSLDG00000025345	ddx1	100	91.622	ENSPFOG00000011921	ddx1	100	91.622	Poecilia_formosa
ENSSLDG00000025345	ddx1	100	91.486	ENSPLAG00000005939	ddx1	100	91.486	Poecilia_latipinna
ENSSLDG00000025345	ddx1	100	91.622	ENSPMEG00000011140	ddx1	100	91.622	Poecilia_mexicana
ENSSLDG00000025345	ddx1	100	91.892	ENSPREG00000011751	ddx1	100	91.892	Poecilia_reticulata
ENSSLDG00000025345	ddx1	100	84.054	ENSPPYG00000012638	DDX1	100	84.054	Pongo_abelii
ENSSLDG00000025345	ddx1	100	72.568	ENSPCAG00000001491	DDX1	100	72.568	Procavia_capensis
ENSSLDG00000025345	ddx1	99	82.337	ENSPCOG00000028185	DDX1	99	82.337	Propithecus_coquereli
ENSSLDG00000025345	ddx1	100	83.919	ENSPVAG00000013618	DDX1	100	83.919	Pteropus_vampyrus
ENSSLDG00000025345	ddx1	100	93.108	ENSPNYG00000013839	ddx1	100	93.257	Pundamilia_nyererei
ENSSLDG00000025345	ddx1	99	88.397	ENSPNAG00000017033	ddx1	97	88.397	Pygocentrus_nattereri
ENSSLDG00000025345	ddx1	100	84.189	ENSRNOG00000006652	Ddx1	100	84.189	Rattus_norvegicus
ENSSLDG00000025345	ddx1	100	82.973	ENSRBIG00000041664	DDX1	100	83.520	Rhinopithecus_bieti
ENSSLDG00000025345	ddx1	100	83.649	ENSRROG00000031167	DDX1	100	83.649	Rhinopithecus_roxellana
ENSSLDG00000025345	ddx1	100	84.459	ENSSBOG00000027577	DDX1	100	84.459	Saimiri_boliviensis_boliviensis
ENSSLDG00000025345	ddx1	99	80.734	ENSSHAG00000009363	DDX1	99	78.155	Sarcophilus_harrisii
ENSSLDG00000025345	ddx1	100	86.351	ENSSFOG00015014476	ddx1	100	86.351	Scleropages_formosus
ENSSLDG00000025345	ddx1	100	93.108	ENSSMAG00000010094	ddx1	100	93.108	Scophthalmus_maximus
ENSSLDG00000025345	ddx1	100	99.324	ENSSDUG00000012334	ddx1	100	99.324	Seriola_dumerili
ENSSLDG00000025345	ddx1	99	75.749	ENSSARG00000004536	DDX1	100	75.749	Sorex_araneus
ENSSLDG00000025345	ddx1	100	83.649	ENSSPUG00000018835	DDX1	100	83.649	Sphenodon_punctatus
ENSSLDG00000025345	ddx1	100	87.703	ENSSPAG00000023554	ddx1	100	87.703	Stegastes_partitus
ENSSLDG00000025345	ddx1	100	84.189	ENSSSCG00000008619	DDX1	100	84.189	Sus_scrofa
ENSSLDG00000025345	ddx1	100	84.324	ENSTGUG00000013096	DDX1	100	84.324	Taeniopygia_guttata
ENSSLDG00000025345	ddx1	99	92.683	ENSTRUG00000015765	ddx1	99	92.683	Takifugu_rubripes
ENSSLDG00000025345	ddx1	100	92.838	ENSTNIG00000016309	ddx1	100	92.838	Tetraodon_nigroviridis
ENSSLDG00000025345	ddx1	99	80.926	ENSTBEG00000008454	DDX1	100	80.926	Tupaia_belangeri
ENSSLDG00000025345	ddx1	100	84.324	ENSTTRG00000005081	DDX1	100	84.324	Tursiops_truncatus
ENSSLDG00000025345	ddx1	63	78.038	ENSUAMG00000017375	DDX1	87	78.038	Ursus_americanus
ENSSLDG00000025345	ddx1	99	84.196	ENSUMAG00000023450	DDX1	100	84.196	Ursus_maritimus
ENSSLDG00000025345	ddx1	85	87.648	ENSVPAG00000007764	DDX1	85	87.648	Vicugna_pacos
ENSSLDG00000025345	ddx1	99	84.218	ENSVVUG00000013085	DDX1	96	84.218	Vulpes_vulpes
ENSSLDG00000025345	ddx1	100	85.000	ENSXETG00000017825	ddx1	100	85.000	Xenopus_tropicalis
ENSSLDG00000025345	ddx1	100	89.157	ENSXCOG00000007082	ddx1	100	89.157	Xiphophorus_couchianus
ENSSLDG00000025345	ddx1	100	91.757	ENSXMAG00000004555	ddx1	100	91.757	Xiphophorus_maculatus