EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000025413 (Gene tree)
Gene ID: -
Gene Symbol: rbm19
Alias: nil per os|npo
Full Name: RNA binding motif protein 19
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 7237 bases
Position: chrPEQF01098996.1:900297-907533
Accession: 111660329
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000033201	RRM_1	PF00076.22	1.4e-79	1	6
ENSSLDP00000033201	RRM_1	PF00076.22	1.4e-79	2	6
ENSSLDP00000033201	RRM_1	PF00076.22	1.4e-79	3	6
ENSSLDP00000033201	RRM_1	PF00076.22	1.4e-79	4	6
ENSSLDP00000033201	RRM_1	PF00076.22	1.4e-79	5	6
ENSSLDP00000033201	RRM_1	PF00076.22	1.4e-79	6	6

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000034128	-	2559	XM_023413566	ENSSLDP00000033201	852 (aa)	XP_023269334	-

Gene Model

Click here to download ENSSLDG00000025413's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000025413's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000025413	rbm19	61	39.474	ENSSLDG00000006981	pabpc1l	66	39.474
ENSSLDG00000025413	rbm19	61	37.333	ENSSLDG00000014156	pabpc1b	58	37.333
ENSSLDG00000025413	rbm19	79	37.333	ENSSLDG00000011661	pabpc1a	57	37.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000025413	rbm19	100	55.763	ENSG00000122965	RBM19	93	70.874	Homo_sapiens
ENSSLDG00000025413	rbm19	95	87.404	ENSAPOG00000010507	rbm19	89	87.558	Acanthochromis_polyacanthus
ENSSLDG00000025413	rbm19	96	61.367	ENSAMEG00000008544	RBM19	87	61.848	Ailuropoda_melanoleuca
ENSSLDG00000025413	rbm19	92	87.730	ENSACIG00000017780	rbm19	88	87.730	Amphilophus_citrinellus
ENSSLDG00000025413	rbm19	95	86.943	ENSAOCG00000008554	rbm19	89	87.097	Amphiprion_ocellaris
ENSSLDG00000025413	rbm19	97	78.305	ENSAPEG00000022381	rbm19	87	89.567	Amphiprion_percula
ENSSLDG00000025413	rbm19	94	85.202	ENSATEG00000007000	rbm19	90	85.358	Anabas_testudineus
ENSSLDG00000025413	rbm19	92	59.807	ENSAPLG00000015319	RBM19	86	59.709	Anas_platyrhynchos
ENSSLDG00000025413	rbm19	94	63.843	ENSACAG00000005065	RBM19	86	63.994	Anolis_carolinensis
ENSSLDG00000025413	rbm19	97	62.370	ENSANAG00000024136	RBM19	88	62.667	Aotus_nancymaae
ENSSLDG00000025413	rbm19	100	70.423	ENSACLG00000001399	rbm19	89	78.714	Astatotilapia_calliptera
ENSSLDG00000025413	rbm19	90	71.122	ENSAMXG00000017073	rbm19	89	71.122	Astyanax_mexicanus
ENSSLDG00000025413	rbm19	95	61.152	ENSBTAG00000031824	RBM19	90	62.245	Bos_taurus
ENSSLDG00000025413	rbm19	83	48.421	WBGene00004315	rbd-1	57	48.421	Caenorhabditis_elegans
ENSSLDG00000025413	rbm19	76	62.038	ENSCJAG00000009798	RBM19	70	62.925	Callithrix_jacchus
ENSSLDG00000025413	rbm19	97	62.969	ENSCAFG00000009146	RBM19	86	63.118	Canis_familiaris
ENSSLDG00000025413	rbm19	97	63.118	ENSCAFG00020017862	RBM19	86	63.268	Canis_lupus_dingo
ENSSLDG00000025413	rbm19	95	61.310	ENSCHIG00000014917	RBM19	90	62.290	Capra_hircus
ENSSLDG00000025413	rbm19	84	60.276	ENSTSYG00000007207	RBM19	83	61.538	Carlito_syrichta
ENSSLDG00000025413	rbm19	75	63.389	ENSCAPG00000006869	RBM19	88	62.896	Cavia_aperea
ENSSLDG00000025413	rbm19	95	63.079	ENSCPOG00000026629	RBM19	99	57.433	Cavia_porcellus
ENSSLDG00000025413	rbm19	96	62.780	ENSCCAG00000021665	-	87	63.677	Cebus_capucinus
ENSSLDG00000025413	rbm19	80	57.656	ENSCCAG00000026637	-	86	58.979	Cebus_capucinus
ENSSLDG00000025413	rbm19	95	62.631	ENSCATG00000035841	RBM19	87	62.482	Cercocebus_atys
ENSSLDG00000025413	rbm19	96	61.333	ENSCLAG00000009965	RBM19	87	62.611	Chinchilla_lanigera
ENSSLDG00000025413	rbm19	99	65.919	ENSCSAG00000002352	RBM19	76	65.829	Chlorocebus_sabaeus
ENSSLDG00000025413	rbm19	93	67.180	ENSCPBG00000011990	RBM19	86	67.033	Chrysemys_picta_bellii
ENSSLDG00000025413	rbm19	85	53.920	ENSCING00000023076	-	93	53.035	Ciona_intestinalis
ENSSLDG00000025413	rbm19	100	61.743	ENSCANG00000035927	RBM19	88	62.482	Colobus_angolensis_palliatus
ENSSLDG00000025413	rbm19	95	62.033	ENSCGRG00001000323	Rbm19	87	63.677	Cricetulus_griseus_chok1gshd
ENSSLDG00000025413	rbm19	95	62.033	ENSCGRG00000010371	Rbm19	87	63.677	Cricetulus_griseus_crigri
ENSSLDG00000025413	rbm19	97	82.110	ENSCSEG00000017436	rbm19	100	77.790	Cynoglossus_semilaevis
ENSSLDG00000025413	rbm19	95	80.982	ENSCVAG00000000300	rbm19	100	70.044	Cyprinodon_variegatus
ENSSLDG00000025413	rbm19	94	73.089	ENSDARG00000042590	rbm19	89	72.171	Danio_rerio
ENSSLDG00000025413	rbm19	94	60.483	ENSDNOG00000024534	RBM19	84	61.271	Dasypus_novemcinctus
ENSSLDG00000025413	rbm19	97	57.002	ENSDORG00000008549	Rbm19	100	57.002	Dipodomys_ordii
ENSSLDG00000025413	rbm19	85	47.475	FBgn0036018	CG3335	90	40.967	Drosophila_melanogaster
ENSSLDG00000025413	rbm19	60	79.710	ENSETEG00000016887	-	57	79.412	Echinops_telfairi
ENSSLDG00000025413	rbm19	76	46.927	ENSEBUG00000008521	-	85	47.556	Eptatretus_burgeri
ENSSLDG00000025413	rbm19	99	56.126	ENSEASG00005009452	RBM19	87	63.174	Equus_asinus_asinus
ENSSLDG00000025413	rbm19	99	56.263	ENSECAG00000023716	RBM19	87	63.278	Equus_caballus
ENSSLDG00000025413	rbm19	100	69.206	ENSELUG00000012561	rbm19	90	76.876	Esox_lucius
ENSSLDG00000025413	rbm19	95	62.613	ENSFCAG00000002962	RBM19	87	62.315	Felis_catus
ENSSLDG00000025413	rbm19	94	64.330	ENSFALG00000007768	RBM19	87	63.720	Ficedula_albicollis
ENSSLDG00000025413	rbm19	94	61.538	ENSFDAG00000004629	RBM19	88	62.146	Fukomys_damarensis
ENSSLDG00000025413	rbm19	95	81.776	ENSFHEG00000012578	rbm19	90	81.776	Fundulus_heteroclitus
ENSSLDG00000025413	rbm19	92	76.763	ENSGMOG00000013120	rbm19	89	76.122	Gadus_morhua
ENSSLDG00000025413	rbm19	93	62.500	ENSGALG00000008289	RBM19	87	63.374	Gallus_gallus
ENSSLDG00000025413	rbm19	96	82.669	ENSGAFG00000012337	rbm19	90	82.822	Gambusia_affinis
ENSSLDG00000025413	rbm19	99	75.682	ENSGACG00000009462	rbm19	89	86.190	Gasterosteus_aculeatus
ENSSLDG00000025413	rbm19	67	66.610	ENSGAGG00000019457	RBM19	99	66.438	Gopherus_agassizii
ENSSLDG00000025413	rbm19	100	55.867	ENSGGOG00000007371	RBM19	88	62.925	Gorilla_gorilla
ENSSLDG00000025413	rbm19	100	73.239	ENSHBUG00000009047	rbm19	100	72.581	Haplochromis_burtoni
ENSSLDG00000025413	rbm19	95	62.611	ENSHGLG00000010899	RBM19	88	63.852	Heterocephalus_glaber_female
ENSSLDG00000025413	rbm19	95	62.023	ENSHGLG00100017936	RBM19	88	63.274	Heterocephalus_glaber_male
ENSSLDG00000025413	rbm19	96	82.335	ENSHCOG00000016446	rbm19	90	81.762	Hippocampus_comes
ENSSLDG00000025413	rbm19	99	62.830	ENSIPUG00000023849	rbm19	90	69.701	Ictalurus_punctatus
ENSSLDG00000025413	rbm19	100	78.888	ENSKMAG00000014807	rbm19	100	79.224	Kryptolebias_marmoratus
ENSSLDG00000025413	rbm19	100	81.166	ENSLBEG00000012897	rbm19	100	81.561	Labrus_bergylta
ENSSLDG00000025413	rbm19	70	62.982	ENSLACG00000012030	RBM19	88	62.982	Latimeria_chalumnae
ENSSLDG00000025413	rbm19	95	70.534	ENSLOCG00000008341	rbm19	89	70.152	Lepisosteus_oculatus
ENSSLDG00000025413	rbm19	83	61.210	ENSLAFG00000004187	RBM19	86	61.032	Loxodonta_africana
ENSSLDG00000025413	rbm19	96	61.961	ENSMFAG00000046091	RBM19	87	61.890	Macaca_fascicularis
ENSSLDG00000025413	rbm19	96	62.110	ENSMMUG00000010496	RBM19	88	62.777	Macaca_mulatta
ENSSLDG00000025413	rbm19	94	58.706	ENSMNEG00000028452	RBM19	86	60.908	Macaca_nemestrina
ENSSLDG00000025413	rbm19	94	61.350	ENSMLEG00000034550	RBM19	84	62.346	Mandrillus_leucophaeus
ENSSLDG00000025413	rbm19	96	87.003	ENSMAMG00000014397	rbm19	90	86.870	Mastacembelus_armatus
ENSSLDG00000025413	rbm19	100	75.054	ENSMZEG00005016607	rbm19	89	85.516	Maylandia_zebra
ENSSLDG00000025413	rbm19	91	55.030	ENSMGAG00000010087	RBM19	89	55.030	Meleagris_gallopavo
ENSSLDG00000025413	rbm19	99	56.508	ENSMAUG00000019290	Rbm19	87	64.307	Mesocricetus_auratus
ENSSLDG00000025413	rbm19	94	62.463	ENSMICG00000014423	RBM19	87	63.582	Microcebus_murinus
ENSSLDG00000025413	rbm19	99	73.913	ENSMMOG00000017839	rbm19	90	81.089	Mola_mola
ENSSLDG00000025413	rbm19	94	63.086	ENSMODG00000003597	RBM19	88	62.935	Monodelphis_domestica
ENSSLDG00000025413	rbm19	100	76.772	ENSMALG00000012647	rbm19	89	85.542	Monopterus_albus
ENSSLDG00000025413	rbm19	96	63.238	MGP_CAROLIEiJ_G0027656	Rbm19	87	63.814	Mus_caroli
ENSSLDG00000025413	rbm19	97	62.891	ENSMUSG00000029594	Rbm19	88	63.166	Mus_musculus
ENSSLDG00000025413	rbm19	96	63.079	MGP_PahariEiJ_G0024238	Rbm19	87	64.955	Mus_pahari
ENSSLDG00000025413	rbm19	99	56.481	MGP_SPRETEiJ_G0028656	Rbm19	87	64.126	Mus_spretus
ENSSLDG00000025413	rbm19	97	61.538	ENSMPUG00000002694	RBM19	86	63.284	Mustela_putorius_furo
ENSSLDG00000025413	rbm19	96	61.618	ENSMLUG00000015075	RBM19	86	60.656	Myotis_lucifugus
ENSSLDG00000025413	rbm19	99	57.309	ENSNGAG00000009076	Rbm19	88	61.752	Nannospalax_galili
ENSSLDG00000025413	rbm19	100	72.648	ENSNBRG00000005913	rbm19	90	82.181	Neolamprologus_brichardi
ENSSLDG00000025413	rbm19	76	61.799	ENSNLEG00000000190	RBM19	70	62.537	Nomascus_leucogenys
ENSSLDG00000025413	rbm19	96	56.684	ENSMEUG00000004045	RBM19	80	58.356	Notamacropus_eugenii
ENSSLDG00000025413	rbm19	95	61.103	ENSOPRG00000012064	RBM19	87	63.040	Ochotona_princeps
ENSSLDG00000025413	rbm19	95	61.444	ENSODEG00000012977	RBM19	87	60.890	Octodon_degus
ENSSLDG00000025413	rbm19	95	82.380	ENSONIG00000013576	rbm19	90	84.485	Oreochromis_niloticus
ENSSLDG00000025413	rbm19	96	61.228	ENSOCUG00000009398	RBM19	87	60.778	Oryctolagus_cuniculus
ENSSLDG00000025413	rbm19	95	82.181	ENSORLG00000008077	rbm19	89	82.028	Oryzias_latipes
ENSSLDG00000025413	rbm19	93	83.654	ENSORLG00020013187	rbm19	88	83.840	Oryzias_latipes_hni
ENSSLDG00000025413	rbm19	96	81.395	ENSORLG00015001774	rbm19	89	82.362	Oryzias_latipes_hsok
ENSSLDG00000025413	rbm19	100	73.362	ENSOMEG00000003334	rbm19	90	82.642	Oryzias_melastigma
ENSSLDG00000025413	rbm19	83	60.000	ENSOGAG00000000602	RBM19	87	60.801	Otolemur_garnettii
ENSSLDG00000025413	rbm19	94	61.848	ENSOARG00000006827	RBM19	89	63.003	Ovis_aries
ENSSLDG00000025413	rbm19	100	55.809	ENSPPAG00000043712	RBM19	70	62.832	Pan_paniscus
ENSSLDG00000025413	rbm19	95	61.562	ENSPPRG00000023027	RBM19	87	62.913	Panthera_pardus
ENSSLDG00000025413	rbm19	99	54.614	ENSPTIG00000011096	RBM19	90	60.210	Panthera_tigris_altaica
ENSSLDG00000025413	rbm19	100	55.809	ENSPTRG00000005494	RBM19	70	62.684	Pan_troglodytes
ENSSLDG00000025413	rbm19	96	61.664	ENSPANG00000004795	RBM19	86	61.585	Papio_anubis
ENSSLDG00000025413	rbm19	99	62.732	ENSPKIG00000017095	rbm19	89	69.410	Paramormyrops_kingsleyae
ENSSLDG00000025413	rbm19	82	66.612	ENSPSIG00000008191	RBM19	84	66.776	Pelodiscus_sinensis
ENSSLDG00000025413	rbm19	97	73.012	ENSPMGG00000019087	rbm19	100	73.976	Periophthalmus_magnuspinnatus
ENSSLDG00000025413	rbm19	94	63.485	ENSPEMG00000018058	Rbm19	99	57.308	Peromyscus_maniculatus_bairdii
ENSSLDG00000025413	rbm19	95	63.338	ENSPCIG00000028861	RBM19	88	62.593	Phascolarctos_cinereus
ENSSLDG00000025413	rbm19	95	83.564	ENSPFOG00000015300	rbm19	89	83.717	Poecilia_formosa
ENSSLDG00000025413	rbm19	95	83.742	ENSPLAG00000000059	rbm19	90	83.257	Poecilia_latipinna
ENSSLDG00000025413	rbm19	96	83.871	ENSPMEG00000018585	rbm19	99	77.546	Poecilia_mexicana
ENSSLDG00000025413	rbm19	100	74.270	ENSPREG00000000978	rbm19	91	81.750	Poecilia_reticulata
ENSSLDG00000025413	rbm19	99	54.812	ENSPPYG00000004993	RBM19	68	61.045	Pongo_abelii
ENSSLDG00000025413	rbm19	95	62.946	ENSPCOG00000016190	RBM19	87	63.308	Propithecus_coquereli
ENSSLDG00000025413	rbm19	76	60.358	ENSPVAG00000011618	RBM19	69	59.911	Pteropus_vampyrus
ENSSLDG00000025413	rbm19	100	73.283	ENSPNYG00000017434	rbm19	100	73.391	Pundamilia_nyererei
ENSSLDG00000025413	rbm19	95	72.853	ENSPNAG00000012069	rbm19	89	72.853	Pygocentrus_nattereri
ENSSLDG00000025413	rbm19	97	64.328	ENSRNOG00000001397	Rbm19	87	64.478	Rattus_norvegicus
ENSSLDG00000025413	rbm19	95	62.334	ENSRBIG00000041419	RBM19	87	61.448	Rhinopithecus_bieti
ENSSLDG00000025413	rbm19	95	62.186	ENSRROG00000031938	RBM19	88	62.629	Rhinopithecus_roxellana
ENSSLDG00000025413	rbm19	98	60.831	ENSSBOG00000021434	-	87	61.326	Saimiri_boliviensis_boliviensis
ENSSLDG00000025413	rbm19	83	56.021	ENSSBOG00000022679	-	86	56.667	Saimiri_boliviensis_boliviensis
ENSSLDG00000025413	rbm19	83	60.243	ENSSHAG00000012256	RBM19	88	60.069	Sarcophilus_harrisii
ENSSLDG00000025413	rbm19	94	70.433	ENSSFOG00015005124	rbm19	88	69.659	Scleropages_formosus
ENSSLDG00000025413	rbm19	97	87.097	ENSSMAG00000011828	rbm19	89	86.943	Scophthalmus_maximus
ENSSLDG00000025413	rbm19	100	84.004	ENSSDUG00000013544	rbm19	91	93.548	Seriola_dumerili
ENSSLDG00000025413	rbm19	68	65.464	ENSSPUG00000011064	RBM19	100	65.292	Sphenodon_punctatus
ENSSLDG00000025413	rbm19	97	80.866	ENSSPAG00000018685	rbm19	98	80.866	Stegastes_partitus
ENSSLDG00000025413	rbm19	99	56.886	ENSSSCG00000009868	RBM19	99	57.754	Sus_scrofa
ENSSLDG00000025413	rbm19	100	56.263	ENSTGUG00000009017	RBM19	99	55.895	Taeniopygia_guttata
ENSSLDG00000025413	rbm19	95	79.385	ENSTRUG00000016032	rbm19	87	79.692	Takifugu_rubripes
ENSSLDG00000025413	rbm19	64	83.792	ENSTNIG00000015903	rbm19	99	83.792	Tetraodon_nigroviridis
ENSSLDG00000025413	rbm19	70	70.323	ENSTBEG00000000703	RBM19	62	70.323	Tupaia_belangeri
ENSSLDG00000025413	rbm19	82	55.519	ENSTTRG00000003987	RBM19	84	57.237	Tursiops_truncatus
ENSSLDG00000025413	rbm19	95	62.074	ENSUAMG00000002076	RBM19	86	63.378	Ursus_americanus
ENSSLDG00000025413	rbm19	96	61.778	ENSUMAG00000010816	RBM19	88	63.079	Ursus_maritimus
ENSSLDG00000025413	rbm19	97	63.268	ENSVVUG00000007886	RBM19	86	63.418	Vulpes_vulpes
ENSSLDG00000025413	rbm19	76	59.969	ENSXETG00000017668	rbm19	70	60.153	Xenopus_tropicalis
ENSSLDG00000025413	rbm19	99	81.213	ENSXCOG00000016995	rbm19	90	81.361	Xiphophorus_couchianus
ENSSLDG00000025413	rbm19	99	80.409	ENSXMAG00000007641	rbm19	91	82.353	Xiphophorus_maculatus