EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000025494 (Gene tree)
Gene ID: -
Gene Symbol: grsf1
Alias: wu:fb62c04|zgc:153305
Full Name: G-rich RNA sequence binding factor 1
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 7442 bases
Position: chrPEQF01099003.1:1146675-1154116
Accession: 111660895
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000033312	RRM_1	PF00076.22	3.9e-26	1	2
ENSSLDP00000033312	RRM_1	PF00076.22	3.9e-26	2	2
ENSSLDP00000033314	RRM_1	PF00076.22	5.9e-26	1	2
ENSSLDP00000033314	RRM_1	PF00076.22	5.9e-26	2	2
ENSSLDP00000033319	RRM_1	PF00076.22	2.6e-25	1	2
ENSSLDP00000033319	RRM_1	PF00076.22	2.6e-25	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000034246	-	885	-	ENSSLDP00000033319	294 (aa)	-	-
ENSSLDT00000034239	-	1071	-	ENSSLDP00000033312	356 (aa)	-	-
ENSSLDT00000034241	-	1131	XM_023414327	ENSSLDP00000033314	376 (aa)	XP_023270095	-

Gene Model

Click here to download ENSSLDG00000025494's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000025494's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000025494	grsf1	92	41.141	ENSSLDG00000010685	hnrnph1	80	41.718
ENSSLDG00000025494	grsf1	89	56.250	ENSSLDG00000025679	hnrnph3	91	46.961

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000025494	grsf1	100	63.861	ENSAPOG00000012487	grsf1	100	63.861	Acanthochromis_polyacanthus
ENSSLDG00000025494	grsf1	100	70.026	ENSACIG00000005871	grsf1	100	70.543	Amphilophus_citrinellus
ENSSLDG00000025494	grsf1	100	63.366	ENSAOCG00000017462	-	100	63.366	Amphiprion_ocellaris
ENSSLDG00000025494	grsf1	100	62.963	ENSAPEG00000007240	-	100	62.963	Amphiprion_percula
ENSSLDG00000025494	grsf1	99	67.254	ENSATEG00000007185	grsf1	100	67.254	Anabas_testudineus
ENSSLDG00000025494	grsf1	100	65.057	ENSACLG00000003685	-	100	64.706	Astatotilapia_calliptera
ENSSLDG00000025494	grsf1	99	48.837	ENSAMXG00000012270	grsf1	98	53.974	Astyanax_mexicanus
ENSSLDG00000025494	grsf1	98	72.539	ENSCSEG00000019209	-	92	72.539	Cynoglossus_semilaevis
ENSSLDG00000025494	grsf1	99	64.380	ENSCVAG00000004476	grsf1	100	64.380	Cyprinodon_variegatus
ENSSLDG00000025494	grsf1	98	50.161	ENSDARG00000053021	grsf1	96	47.607	Danio_rerio
ENSSLDG00000025494	grsf1	97	47.839	ENSFHEG00000013358	-	99	45.792	Fundulus_heteroclitus
ENSSLDG00000025494	grsf1	91	65.789	ENSGMOG00000014047	grsf1	99	52.508	Gadus_morhua
ENSSLDG00000025494	grsf1	99	59.446	ENSGAFG00000004496	grsf1	99	59.446	Gambusia_affinis
ENSSLDG00000025494	grsf1	93	60.882	ENSGACG00000014447	grsf1	98	61.656	Gasterosteus_aculeatus
ENSSLDG00000025494	grsf1	100	65.111	ENSHBUG00000006284	grsf1	99	65.111	Haplochromis_burtoni
ENSSLDG00000025494	grsf1	98	56.780	ENSHCOG00000007715	-	100	54.975	Hippocampus_comes
ENSSLDG00000025494	grsf1	95	56.997	ENSIPUG00000010533	grsf1	79	60.726	Ictalurus_punctatus
ENSSLDG00000025494	grsf1	98	59.270	ENSKMAG00000004528	grsf1	100	55.529	Kryptolebias_marmoratus
ENSSLDG00000025494	grsf1	91	56.442	ENSLBEG00000018100	grsf1	94	59.933	Labrus_bergylta
ENSSLDG00000025494	grsf1	99	65.664	ENSMAMG00000002627	grsf1	99	65.664	Mastacembelus_armatus
ENSSLDG00000025494	grsf1	100	65.057	ENSMZEG00005020633	-	100	64.706	Maylandia_zebra
ENSSLDG00000025494	grsf1	97	68.391	ENSMMOG00000014231	grsf1	99	69.811	Mola_mola
ENSSLDG00000025494	grsf1	99	66.749	ENSMALG00000000251	grsf1	99	66.749	Monopterus_albus
ENSSLDG00000025494	grsf1	98	64.677	ENSNBRG00000017774	grsf1	96	64.677	Neolamprologus_brichardi
ENSSLDG00000025494	grsf1	91	77.059	ENSONIG00000014119	grsf1	97	77.059	Oreochromis_niloticus
ENSSLDG00000025494	grsf1	97	60.857	ENSORLG00000030211	grsf1	99	58.543	Oryzias_latipes
ENSSLDG00000025494	grsf1	97	61.143	ENSORLG00020014383	grsf1	99	59.898	Oryzias_latipes_hni
ENSSLDG00000025494	grsf1	97	61.143	ENSORLG00015006520	grsf1	99	59.548	Oryzias_latipes_hsok
ENSSLDG00000025494	grsf1	97	61.891	ENSOMEG00000009181	grsf1	100	62.791	Oryzias_melastigma
ENSSLDG00000025494	grsf1	96	52.616	ENSPKIG00000019432	grsf1	77	58.228	Paramormyrops_kingsleyae
ENSSLDG00000025494	grsf1	99	63.305	ENSPMGG00000013654	grsf1	95	65.607	Periophthalmus_magnuspinnatus
ENSSLDG00000025494	grsf1	99	59.753	ENSPFOG00000006122	grsf1	99	59.259	Poecilia_formosa
ENSSLDG00000025494	grsf1	99	60.349	ENSPLAG00000020977	grsf1	99	60.349	Poecilia_latipinna
ENSSLDG00000025494	grsf1	99	60.247	ENSPMEG00000012485	grsf1	99	59.753	Poecilia_mexicana
ENSSLDG00000025494	grsf1	99	58.911	ENSPREG00000013383	grsf1	99	58.911	Poecilia_reticulata
ENSSLDG00000025494	grsf1	100	65.594	ENSPNYG00000005379	grsf1	100	65.594	Pundamilia_nyererei
ENSSLDG00000025494	grsf1	95	61.379	ENSPNAG00000014912	grsf1	82	62.090	Pygocentrus_nattereri
ENSSLDG00000025494	grsf1	97	44.058	ENSSFOG00015014620	grsf1	86	44.898	Scleropages_formosus
ENSSLDG00000025494	grsf1	100	64.486	ENSSMAG00000014181	grsf1	88	64.486	Scophthalmus_maximus
ENSSLDG00000025494	grsf1	100	91.579	ENSSDUG00000009397	-	100	91.579	Seriola_dumerili
ENSSLDG00000025494	grsf1	99	60.250	ENSSPAG00000023296	grsf1	99	60.250	Stegastes_partitus
ENSSLDG00000025494	grsf1	98	60.907	ENSTRUG00000015354	grsf1	100	61.480	Takifugu_rubripes
ENSSLDG00000025494	grsf1	94	62.626	ENSTNIG00000015350	-	97	66.667	Tetraodon_nigroviridis
ENSSLDG00000025494	grsf1	99	57.895	ENSXMAG00000029710	grsf1	100	57.895	Xiphophorus_maculatus